Clone BO14016 Report

Search the DGRC for BO14016

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG14618-RA
Protein status:BO14016.pep: Inserted from web
Sequenced Size:991

Clone Sequence Records

BO14016.complete Sequence

991 bp assembled on 2008-09-03

GenBank Submission: KX799517

> BO14016.complete
GAAGTTATCAGTCGACATGGATACGACAGAAAAGGCTCTCAAGGAGGTGA
CCCCGGCGATGCTTAGCCTGAACAATTGCCCGGGCACAACGCCCGGCACG
CCGATGAGCAAAAATCAGCTTAAGAAGCAGCGAAAGCTGGCGGAGTTTGC
CGAACTCCGGAAGCTGCGACGCGAACGGGAGCGTGAGAAGAAAAAGCAGA
AGCGGCGGGAGGCCAAGGAGCTGGGTCTGCCCGTCCGGACGGGACCCTCC
CGCAAGGAGCTGAAGAAACGCCAGTTGGCAGACGGCGGAAAGTCTGGCCT
CTCGGTCGCTATAGATCTGGACTACGACGATCTGATGCAGGAACGGGACA
TCGTCAAGTGCGTGAAGCAGTGCCTTCGCATCTACACCATTAATCGGCGC
AGCCCACAGCCGGGCAATCTGCACTTCACAGGCATCCGGCGCAACGGTCA
CATCCACGAGTCATTCAAGAAGAACGAAGGCTGGGAGAACTGGCACGTGC
AGTACTACTTCGATCGCGGGCACACCGATATTTTCGAGCATAGCCAACTG
GTCTACCTCACCTGCGAGTCGGATCGGGTGTTGGACAAGCTGCAGCCCGG
CTGCACCTACGTCATCGGTGGCCTGGTGGACCACAATCACTTCAAGGGCC
TGTGCCACTCGAGGGCCACGTCGGCGGGGCTGACTACCGCTCGCCTCCCG
CTTAGCGAGCATGTAGACATGAAGACGAGGGCCGTGCTGAGCACCTACCA
TGTGTTTGAGCTGCTGACCAAAGTTGCTGCCGGTCAGGACTGGACTACGG
CCATTCTGGAAACTATTCCCATGCGCAAGGGAGCCAAGGCGAAAATCACA
GACAAAAAGGAGCCGAATCATTGCTTGGAGCAGCAGGATGAAAAACAGAA
ACAGGAAGCTGAGTCAGATAAGCCCACCTTAACCGCCGTCGAGTCTGAAA
TCGAATCCCATTCTTTAGACAGTGCAAGCTTTCTAGACCAT

BO14016.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-RA 960 CG14618-PA 1..957 17..973 4785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-RA 1210 CG14618-RA 113..1069 17..973 4785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22473810..22474545 17..752 3680 100 Plus
X 23542271 X 22474636..22474857 752..973 1110 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:35:24 has no hits.

BO14016.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:16:41 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 70..1037 6..973 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:23 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 113..1069 17..975 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:55:15 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 81..1037 17..975 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:19 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 113..1069 17..975 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:19 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
X 22473810..22474545 17..752 100 -> Plus
X 22474637..22474857 753..975 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:23 Download gff for BO14016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21875646..21876381 17..752 100 -> Plus
arm_X 21876473..21876693 753..975 99   Plus

BO14016.3prime Sequence

648 bp (600 high quality bases) assembled on 2006-05-29

> BO14016.3prime
ATGGTCTAGAAAGCTTGCACTGTCTAAAGAATGGGATTCGATTTCAGACT
CGACGGCGGTTAAGGTGGGCTTATCTGACTCAGCTTCCTGTTTCTGTTTT
TCATCCTGCTGCTCCAAGCAATGATTCGGCTCCTTTTTGTCTGTGATTTT
CGCCTTGGCTCCCTTGCGCATGGGAATAGTTTCCAGAATGGCCGTAGTCC
AGTCCTGACCGGCAGCAACTTTGGTCAGCAGCTCAAACACATGGTAGGTG
CTCAGCACGGCCCTCGTCTTCATGTCTACATGCTCGCTAAGCGGGAGGCG
AGCGGTAGTCAGCCCCGCCGACGTGGCCCTCGAGTGGCACAGGCCCTTGA
AGTGATTGTGGTCCACCAGGCCACCGATGACGTAGGTGCAGCCGGGCTGC
AGCTTGTCCAACACCCGATCCGACTCGCAGGTGAGGTAGACCAGTTGGCT
ATGCTCGAAAATATCGGTGTGCCCGCGATCAAAGTAGTACTGCACGTGCC
AGTTCTCCCAGCCTTCGTTCTTCTTGAATGACTCGTGGATGTGACCGTTG
CGCCCGGATGCCTGTGAAGTGCAAATTGCCCGGTTGTGGGCTGCGCCGAT
TAATGATGTAGATGCGAAGGCACTGCTTCCCGCAACTTGACGAAGTCC

BO14016.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-PA 960 CG14618-RA 422..957 554..19 2655 99.8 Minus
CG14618-PA 960 CG14618-RA 348..423 629..554 305 96 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-RA 1210 CG14618-RA 442..1069 648..19 3010 98.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22474139..22474545 648..240 1855 98 Minus
X 23542271 X 22474636..22474857 240..19 1110 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:36:12 has no hits.

BO14016.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:09 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-PA 330..960 16..648 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:46 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-PA 330..960 16..648 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:18:51 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 442..1069 19..648 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:18:30 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 442..1069 19..648 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:18:30 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
X 22474139..22474545 240..648 98 -> Minus
X 22474637..22474855 21..239 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:18:51 Download gff for BO14016.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21875975..21876381 240..648 98 -> Minus
arm_X 21876473..21876691 21..239 100 -> Minus

BO14016.5prime Sequence

618 bp (602 high quality bases) assembled on 2006-05-29

> BO14016.5prime
GAAGTTATCAGTCGACATGGATACGACAGAAAAGGCTCTCAAGGAGGTGA
CCCCGGCGATGCTTAGCCTGAACAATTGCCCGGGCACAACGCCCGGCACG
CCGATGAGCAAAAATCAGCTTAAGAAGCAGCGAAAGCTGGCGGAGTTTGC
CGAACTCCGGAAGCTGCGACGCGAACGGGAGCGTGAGAAGAAAAAGCAGA
AGCGGCGGGAGGCCAAGGAGCTGGGTCTGCCCGTCCGGACGGGACCCTCC
CGCAAGGAGCTGAAGAAACGCCAGTTGGCAGACGGCGGAAAGTCTGGCCT
CTCGGTCGCTATAGATCTGGACTACGACGATCTGATGCACGAACGGGACA
TCGTCAAGTGCGTGAAGCAGTGCCTTCGCATCTACACCATTAATCGGCGC
AGCCCACAGCCGGGCAATCTGCACTTCACAGGCATCCGGCGCAACGGTCA
CATCCACGAGTCATTCAAGAAGAACGAAGGCTGGGAGAACTGGCACGTGC
AGTACTACTTCGATCGCGGGCACACCGATATTTTCGAGCATAGCCCAACT
GGTCTACCTCACCTGCGAGTCGGATCGGGTGTTGGACAAGCTGCAGCCCG
GCTGCACCTACGTCATCG

BO14016.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-PA 960 CG14618-RA 1..529 17..545 2620 99.8 Plus
CG14618-PA 960 CG14618-RA 528..601 545..618 370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-RA 1210 CG14618-RA 113..713 17..618 2970 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22473810..22474410 17..618 2945 99.7 Plus
Blast to na_te.dros performed on 2015-02-11 09:44:32 has no hits.

BO14016.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:10 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-PA 1..601 17..618 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:47 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-PA 1..601 17..618 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:05:02 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 102..713 6..618 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:59:59 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14618-RA 102..713 6..618 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:59:59 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
X 22473799..22474410 6..618 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:05:02 Download gff for BO14016.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21875635..21876246 6..618 98   Plus

BO14016.pep Sequence

Translation from 16 to 991

> BO14016.pep
MDTTEKALKEVTPAMLSLNNCPGTTPGTPMSKNQLKKQRKLAEFAELRKL
RREREREKKKQKRREAKELGLPVRTGPSRKELKKRQLADGGKSGLSVAID
LDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESF
KKNEGWENWHVQYYFDRGHTDIFEHSQLVYLTCESDRVLDKLQPGCTYVI
GGLVDHNHFKGLCHSRATSAGLTTARLPLSEHVDMKTRAVLSTYHVFELL
TKVAAGQDWTTAILETIPMRKGAKAKITDKKEPNHCLEQQDEKQKQEAES
DKPTLTAVESEIESHSLDSASFLDH

BO14016.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14618-PA 319 CG14618-PA 1..319 1..319 1679 100 Plus
CG5190-PA 446 CG5190-PA 127..384 43..285 174 22.3 Plus