BO14027.complete Sequence
517 bp assembled on 2008-11-10
GenBank Submission: KX798991
> BO14027.complete
GAAGTTATCAGTCGACATGAAACTTTTCATCGCGCTCTCTGTTCTGGTGG
CTGTGGCATCGGCCCTGCCTCAATTCGGCGGAAACGCCAACGCCAACGCG
AATGCTAATGCCAATGCCCAGGGCGGCCTTGGAGGTCGTCCTGGATTCGG
CGGTGGCCCAGGGTTTGGCGGTGGCCCAGGTTTCGGCGGTGGCCCAGGTT
TCGGCGGTCGCCCAGGCTTTGGCGGTGGCCCAGGATTCGGCGGTGGCCCA
GGTTTCGGCGGTGGCCAAGGTTTCGGCGGTCGCCCAGGATTCGGCGGTGG
CCCAGGATTCGGCGGTGGATTTGGTGGAGGTCCTGGATTTGGTGGTGGCT
CAGGATTCGGTGGTGGACGTCCTGCAGTCGGTGGCTCATCTGCGGCCTCA
GCCTCTTCCTCGGCATCGGCTAGTGGTGGCGGACGTGGTGGCGCTGGATC
CGCTTCTGCATCGTCATCCGCCAATGCCTCCGGAGGTGGACTGTACGGTG
CAAGCTTTCTAGACCAT
BO14027.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7296-RB | 486 | CG7296-PB | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG7296-RA | 486 | CG7296-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG7296-RB | 486 | CG7296-PB | 184..302 | 146..264 | 460 | 92.4 | Plus |
| CG7296-RB | 486 | CG7296-PB | 113..264 | 165..316 | 460 | 86.8 | Plus |
| CG7296-RB | 486 | CG7296-PB | 130..248 | 200..318 | 460 | 92.4 | Plus |
| CG7296-RB | 486 | CG7296-PB | 149..300 | 129..280 | 460 | 86.8 | Plus |
| CG7296-RA | 486 | CG7296-PA | 113..264 | 165..316 | 460 | 86.8 | Plus |
| CG7296-RA | 486 | CG7296-PA | 130..248 | 200..318 | 460 | 92.4 | Plus |
| CG7296-RA | 486 | CG7296-PA | 149..300 | 129..280 | 460 | 86.8 | Plus |
| CG7296-RA | 486 | CG7296-PA | 184..302 | 146..264 | 460 | 92.4 | Plus |
| CG7296-RB | 486 | CG7296-PB | 118..230 | 206..318 | 430 | 92 | Plus |
| CG7296-RB | 486 | CG7296-PB | 190..302 | 134..246 | 430 | 92 | Plus |
| CG7296-RA | 486 | CG7296-PA | 118..230 | 206..318 | 430 | 92 | Plus |
| CG7296-RA | 486 | CG7296-PA | 190..302 | 134..246 | 430 | 92 | Plus |
| CG7296-RB | 486 | CG7296-PB | 109..212 | 215..318 | 325 | 87.5 | Plus |
| CG7296-RB | 486 | CG7296-PB | 199..302 | 125..228 | 325 | 87.5 | Plus |
| CG7296-RA | 486 | CG7296-PA | 109..212 | 215..318 | 325 | 87.5 | Plus |
| CG7296-RA | 486 | CG7296-PA | 199..302 | 125..228 | 325 | 87.5 | Plus |
| CG7296-RB | 486 | CG7296-PB | 130..248 | 254..366 | 230 | 81.5 | Plus |
| CG7296-RB | 486 | CG7296-PB | 238..350 | 146..264 | 230 | 81.5 | Plus |
| CG7296-RA | 486 | CG7296-PA | 130..248 | 254..366 | 230 | 81.5 | Plus |
| CG7296-RA | 486 | CG7296-PA | 238..350 | 146..264 | 230 | 81.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7296-RB | 943 | CG7296-RB | 118..602 | 15..499 | 2425 | 100 | Plus |
| CG7296-RA | 599 | CG7296-RA | 41..525 | 15..499 | 2425 | 100 | Plus |
| CG7296-RB | 943 | CG7296-RB | 268..419 | 129..280 | 460 | 86.8 | Plus |
| CG7296-RB | 943 | CG7296-RB | 249..367 | 200..318 | 460 | 92.4 | Plus |
| CG7296-RB | 943 | CG7296-RB | 232..383 | 165..316 | 460 | 86.8 | Plus |
| CG7296-RB | 943 | CG7296-RB | 303..421 | 146..264 | 460 | 92.4 | Plus |
| CG7296-RA | 599 | CG7296-RA | 155..306 | 165..316 | 460 | 86.8 | Plus |
| CG7296-RA | 599 | CG7296-RA | 172..290 | 200..318 | 460 | 92.4 | Plus |
| CG7296-RA | 599 | CG7296-RA | 191..342 | 129..280 | 460 | 86.8 | Plus |
| CG7296-RA | 599 | CG7296-RA | 226..344 | 146..264 | 460 | 92.4 | Plus |
| CG7296-RB | 943 | CG7296-RB | 237..349 | 206..318 | 430 | 92 | Plus |
| CG7296-RB | 943 | CG7296-RB | 309..421 | 134..246 | 430 | 92 | Plus |
| CG7296-RA | 599 | CG7296-RA | 160..272 | 206..318 | 430 | 92 | Plus |
| CG7296-RA | 599 | CG7296-RA | 232..344 | 134..246 | 430 | 92 | Plus |
| CG7296-RB | 943 | CG7296-RB | 228..331 | 215..318 | 325 | 87.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 318..421 | 125..228 | 325 | 87.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 151..254 | 215..318 | 325 | 87.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 241..344 | 125..228 | 325 | 87.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 249..367 | 254..366 | 230 | 81.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 357..469 | 146..264 | 230 | 81.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 172..290 | 254..366 | 230 | 81.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 280..392 | 146..264 | 230 | 81.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10686465..10686949 | 499..15 | 2425 | 100 | Minus |
| 2L | 23513712 | 2L | 10686646..10686764 | 264..146 | 460 | 92.4 | Minus |
| 2L | 23513712 | 2L | 10686648..10686799 | 280..129 | 460 | 86.8 | Minus |
| 2L | 23513712 | 2L | 10686684..10686835 | 316..165 | 460 | 86.8 | Minus |
| 2L | 23513712 | 2L | 10686700..10686818 | 318..200 | 460 | 92.4 | Minus |
| 2L | 23513712 | 2L | 10686646..10686758 | 246..134 | 430 | 92 | Minus |
| 2L | 23513712 | 2L | 10686718..10686830 | 318..206 | 430 | 92 | Minus |
| 2L | 23513712 | 2L | 10686646..10686749 | 228..125 | 325 | 87.5 | Minus |
| 2L | 23513712 | 2L | 10686736..10686839 | 318..215 | 325 | 87.5 | Minus |
| 2L | 23513712 | 2L | 10686598..10686710 | 264..146 | 230 | 81.5 | Minus |
| 2L | 23513712 | 2L | 10686700..10686818 | 366..254 | 230 | 81.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:58:17 has no hits.
BO14027.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:16:05 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 37..524 | 12..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:48 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 43..525 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:02:47 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 42..524 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:11 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 43..525 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:11 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10686463..10686947 | 17..501 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:48 Download gff for
BO14027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10686463..10686947 | 17..501 | 99 | | Minus |
BO14027.pep Sequence
Translation from 16 to 517
> BO14027.pep
MKLFIALSVLVAVASALPQFGGNANANANANANAQGGLGGRPGFGGGPGF
GGGPGFGGGPGFGGRPGFGGGPGFGGGPGFGGGQGFGGRPGFGGGPGFGG
GFGGGPGFGGGSGFGGGRPAVGGSSAASASSSASASGGGRGGAGSASASS
SANASGGGLYGASFLDH
BO14027.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7296-PB | 161 | CG7296-PB | 1..161 | 1..161 | 871 | 100 | Plus |
| CG7296-PA | 161 | CG7296-PA | 1..161 | 1..161 | 871 | 100 | Plus |
| CG7299-PC | 177 | CG7299-PC | 1..161 | 1..158 | 402 | 56.3 | Plus |
| CG7299-PA | 177 | CG7299-PA | 1..161 | 1..158 | 402 | 56.3 | Plus |
| CG7294-PA | 127 | CG7294-PA | 1..127 | 1..161 | 368 | 58.9 | Plus |
