Clone Sequence Records
BO14028.3prime Sequence
479 bp (478 high quality bases) assembled on 2006-05-29
> BO14028.3prime
ATGGTCTAGAAAGCTTGCTTCGTTTAATTTGTTTGTATTTTTACCCGCTT
CGGTGACCTCATCGCTCTGCTCGAAGCTTTCAGTTAGACAAGTCACCATC
TTAAACGCATATTCGCAATGATCTTCTTCCTCATCGTAGATTTTCTTGCA
ATCGTAGAGTATCTCTCGCAGTTCATCGCTCACGGGCTCAATTTGATCAA
TTTTATCCACATCCAAATAGCCATTGGTATCCAAAAGATTTCCCTTCTCC
GCTAGGCAATGGATGAAGCATTTGTATCTTCTGTCGGTATTCTCGAGGTC
ATCCTCTTCGGAGCTGTTGCGATCGATGAGTTCCTGGAATTCAGCCTGGC
TGATGTTATTGCTGGCCAGGCAATCTGACACGTAATTGGTTTCCTCCAGA
AGTGAGAGACTCTGTATGGAGACCACGCTGACAGTCAAGATACATATTAG
CCATAGCTTAAGCATGTCGACTGATAACT
BO14028.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13421-PA | 450 | Obp57c-RA | 1..447 | 465..19 | 2235 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..530 | 465..19 | 2235 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:11:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504175 | 413..19 | 1975 | 100 | Minus |
2R | 25286936 | 2R | 20503667..20503720 | 465..412 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 14:11:19 has no hits.
BO14028.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:25 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 15..465 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:08 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 15..465 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 03:02:25 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 15..465 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:54:46 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 15..465 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:54:46 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 412..465 | 100 | -> | Minus |
2R | 20503783..20504178 | 15..411 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 03:02:25 Download gff for
BO14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 412..465 | 100 | -> | Minus |
arm_2R | 16391288..16391683 | 15..411 | 99 | | Minus |
BO14028.5prime Sequence
479 bp (478 high quality bases) assembled on 2006-05-29
> BO14028.5prime
GAAGTTATCAGTCGACATGCTTAAGCTATGGCTAATATGTATCTTGACTG
TCAGCGTGGTCTCCATACAGAGTCTCTCACTTCTGGAGGAAACCAATTAC
GTGTCAGATTGCCTGGCCAGCAATAACATCAGCCAGGCTGAATTCCAGGA
ACTCATCGATCGCAACAGCTCCGAAGAGGATGACCTCGAGAATACCGACA
GAAGATACAAATGCTTCATCCATTGCCTAGCGGAGAAGGGAAATCTTTTG
GATACCAATGGCTATTTGGATGTGGATAAAATTGATCAAATTGAGCCCGT
GAGCGATGAACTGCGAGAGATACTCTACGATTGCAAGAAAATCTACGATG
AGGAAGAAGATCATTGCGAATATGCGTTTAAGATGGTGACTTGTCTAACT
GAAAGCTTCGAGCAGAGCGATGAGGTCACCGAAGCGGGTAAAAATACAAA
CAAATTAAACGAAGCAAGCTTTCTAGACC
BO14028.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13421-PA | 450 | Obp57c-RA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..530 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:43:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504175 | 69..463 | 1975 | 100 | Plus |
2R | 25286936 | 2R | 20503667..20503720 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:43:47 has no hits.
BO14028.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:26 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:10 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:58:52 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:45:08 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:45:08 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 17..70 | 100 | -> | Plus |
2R | 20503783..20504178 | 71..467 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:58:52 Download gff for
BO14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 17..70 | 100 | -> | Plus |
arm_2R | 16391288..16391683 | 71..467 | 99 | | Plus |
BO14028.complete Sequence
481 bp assembled on 2006-10-11
GenBank Submission: FJ633002
> BO14028.complete
GAAGTTATCAGTCGACATGCTTAAGCTATGGCTAATATGTATCTTGACTG
TCAGCGTGGTCTCCATACAGAGTCTCTCACTTCTGGAGGAAACCAATTAC
GTGTCAGATTGCCTGGCCAGCAATAACATCAGCCAGGCTGAATTCCAGGA
ACTCATCGATCGCAACAGCTCCGAAGAGGATGACCTCGAGAATACCGACA
GAAGATACAAATGCTTCATCCATTGCCTAGCGGAGAAGGGAAATCTTTTG
GATACCAATGGCTATTTGGATGTGGATAAAATTGATCAAATTGAGCCCGT
GAGCGATGAACTGCGAGAGATACTCTACGATTGCAAGAAAATCTACGATG
AGGAAGAAGATCATTGCGAATATGCGTTTAAGATGGTGACTTGTCTAACT
GAAAGCTTCGAGCAGAGCGATGAGGTCACCGAAGCGGGTAAAAATACAAA
CAAATTAAACGAAGCAAGCTTTCTAGACCAT
BO14028.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:43:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 450 | CG13421-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:43:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..530 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:43:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504175 | 69..463 | 1975 | 100 | Plus |
2R | 25286936 | 2R | 20503667..20503720 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:43:20 has no hits.
BO14028.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:23:19 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 1..450 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:57:06 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 53..502 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:20 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..530 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:23:19 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 53..502 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:57 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..530 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:57 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 17..70 | 100 | -> | Plus |
2R | 20503783..20504175 | 71..465 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:20 Download gff for
BO14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 17..70 | 100 | -> | Plus |
arm_2R | 16391288..16391680 | 71..465 | 99 | | Plus |
BO14028.pep Sequence
Translation from 16 to 481
> BO14028.pep
MLKLWLICILTVSVVSIQSLSLLEETNYVSDCLASNNISQAEFQELIDRN
SSEEDDLENTDRRYKCFIHCLAEKGNLLDTNGYLDVDKIDQIEPVSDELR
EILYDCKKIYDEEEDHCEYAFKMVTCLTESFEQSDEVTEAGKNTNKLNEA
SFLDH
BO14028.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-PA | 149 | CG13421-PA | 1..149 | 1..149 | 777 | 100 | Plus |