Clone BO14033 Report

Search the DGRC for BO14033

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG7967-RA
Protein status:BO14033.pep: Imported from assembly
Sequenced Size:982

Clone Sequence Records

BO14033.3prime Sequence

626 bp (563 high quality bases) assembled on 2006-05-29

> BO14033.3prime
ATGGTCTAGAAAGCTTGCCTCGGACCCGGTGCTCAGCAGCTTCAGGGCCT
TCTGCAGGTTCTCGATGGCTGTCTTGACGTCGTCGTAGTTGAGGGCACTG
CCGGCGTACTTGCAATACTTCTGGGCGGTAATCATTTGGTCGGGAGTGAT
TTGCACCCCGGCCACGGGCACAATGGGCTGGTAAATGGTGGCCGCCGTGG
CCGGATTAGGCTGAGCTGTGGGCACGTAGGGCACAAAGCCGCCCGGCTTC
TCCTCGTCCACCGGTGGACTGGGCAATTTGTTCGGGTTGTTCAGCACCTC
CTCGGCGGTGGGAGGGACCACTCCGGAAGTTGTCGGTGATGATGGAGCTG
GTGGCTGTGAGTCAGGCTCCGGCTTGGTAGGGCGCTGGAGCAGCTGCTCC
CGCGGCGTCCTCCGGCGATGTGTCTGCCGAGGCGTTGGCATTCTCCCCCT
CGAGCTCCGCCTCATCGTCGTCGTCTGGCAAGGGGCCGGGAATCGGTGTC
TCACCGTTCTTCAGGCATTTGTGGATTGTAGGCGGCCTTCCACTTGGCGT
ACTTCCTGTTGTGCAGCGCCTCTTCGCTCAGTTCACCGAAGGTCTGGAGA
ATGTCGTAGAGCACACCACTGGAGTA

BO14033.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG7967-PA 951 CG7967-RA 593..948 374..19 1780 100 Minus
CG7967-PA 951 CG7967-RA 442..593 526..375 735 99.3 Minus
CG7967-PA 951 CG7967-RA 343..442 626..527 500 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7967-RA 1257 CG7967-RA 444..1049 626..19 2975 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1651640..1652245 19..626 2925 99.5 Plus
Blast to na_te.dros performed on 2015-02-08 13:26:23 has no hits.

BO14033.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:29 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7967-PA 344..951 18..625 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:14 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7967-PA 344..951 18..625 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:52:32 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7967-RA 445..1049 19..625 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:55:41 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7967-RA 445..1049 19..625 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:55:41 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 1651640..1652244 19..625 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:52:32 Download gff for BO14033.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1651640..1652244 19..625 99   Plus

BO14033.complete Sequence

982 bp assembled on 2010-07-02

GenBank Submission: KX799976

> BO14033.complete
GAAGTTATCAGTCGACATGGAGTTTCCGCCTTGTCCTCCCTCGCTGAAGT
CCATCCAACACTTTCTGAAGCTGGCCCAGGAACATGATACCCGGGATGTG
GTCATCGCCTACTGGGCGAGACTCTATGCTCTCCAGGTGGGCCTCAAAGC
CTCCACCCAAACGGGTGAAGAAACCAAACTGCTGCTGGGCATCATGGACT
GGCTGGAGCAGATGAAGAAACAGTATGCTGAGAACGAGGCCATCACCAAC
GAGGTGGCTGCCCAGGCACACATCGAGAACTACGCCTTGAAACTATTCCT
GTACGCCGACAAACAGGATCGCGAGGAGAACTTCGGAAAAAACGTCGTTA
AGGCCTTCTACTCCAGTGGTGTGCTCTACGACATTCTCCAGACCTTCGGT
GAACTGAGCGAAGAGGCGCTGCACAACAGGAAGTACGCCAAGTGGAAGGC
CGCCTACATCCACAATTGCCTGAAGAACGGTGAGACACCGATTCCCGGCC
CCTTGCCAGACGACGACGATGAGGCGGAGCTCGAGGGGGAGAATGCCAAC
GCCTCGGCAGACACATCGCCGGAGGACGCCGCGGGAGCAGCTGCTCCAGC
GCCCTACCAGCCGGAGCCTGACTCACAGCCACCAGCTCCATCATCACCGA
CAACTTCCGGAGTGGTCCCTCCCACCGCCGAGGAGGTGCTGAACAACCCG
AACAAATTGCCCAGTCCACCGGTGGACGAGGAGAAGCCGGGCGGCTTTGT
GCCCTACGTGCCCACAGCTCAGCCTAATCCGGCCACGGCGGCCACCATTT
ACCAGCCCATTGTGCCCGTGGCCGGGGTGCAAATCACTCCCGACCAAATG
ATTACCGCCCAGAAGTATTGCAAGTACGCCGGCAGTGCCCTCAACTACGA
CGACGTCAAGACAGCCATCGAGAACCTGCAGAAGGCCCTGAAGCTGCTGA
GCACCGGGTCCGAGGCAAGCTTTCTAGACCAT

BO14033.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG7967-RA 951 CG7967-PA 1..948 17..964 4740 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7967-RA 1257 CG7967-RA 102..1049 17..964 4740 100 Plus
CG7970-RC 1270 CG7970-RC 1..50 66..17 250 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1651640..1652264 964..340 3125 100 Minus
3L 28110227 3L 1652332..1652483 339..188 760 100 Minus
3L 28110227 3L 1652690..1652799 126..17 550 100 Minus
3L 28110227 3L 1652566..1652628 189..127 315 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:20:26 has no hits.

BO14033.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:49 Download gff for BO14033.complete
Subject Subject Range Query Range Percent Splice Strand
CG7967-RA 120..1067 17..966 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:58 Download gff for BO14033.complete
Subject Subject Range Query Range Percent Splice Strand
CG7967-RA 102..1049 17..966 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:07 Download gff for BO14033.complete
Subject Subject Range Query Range Percent Splice Strand
CG7967-RA 102..1049 17..966 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:07 Download gff for BO14033.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1651638..1652264 340..966 99 <- Minus
3L 1652332..1652482 189..339 100 <- Minus
3L 1652567..1652628 127..188 100 <- Minus
3L 1652690..1652799 17..126 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:58 Download gff for BO14033.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1651638..1652264 340..966 99 <- Minus
arm_3L 1652332..1652482 189..339 100 <- Minus
arm_3L 1652567..1652628 127..188 100 <- Minus
arm_3L 1652690..1652799 17..126 100   Minus

BO14033.pep Sequence

Translation from 16 to 982

> BO14033.pep
MEFPPCPPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTG
EETKLLLGIMDWLEQMKKQYAENEAITNEVAAQAHIENYALKLFLYADKQ
DREENFGKNVVKAFYSSGVLYDILQTFGELSEEALHNRKYAKWKAAYIHN
CLKNGETPIPGPLPDDDDEAELEGENANASADTSPEDAAGAAAPAPYQPE
PDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPT
AQPNPATAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTA
IENLQKALKLLSTGSEASFLDH

BO14033.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7967-PA 316 CG7967-PA 1..316 1..316 1661 100 Plus