Clone Sequence Records
BO14048.complete Sequence
730 bp assembled on 2008-09-03
GenBank Submission: KX794123
> BO14048.complete
GAAGTTATCAGTCGACATGAATGTAGGCAAGATAAGCGTTGTCACCAGAC
TTCCTGCCCTCCGCTCGTGCGCCCAGTACTCGAGCGCTGCGAAAGCGGAA
CTGCCGGCTTCCTTGGTCGGCGACGTGGATGTGGAACCAACATATCCCCA
GACGGTGGACAGATCCGGCCTGCAACCACAACACAAAAATGTGCTCCTTA
ACAAATTGCCATACCAGGAACCTCACTCCTGGATTCATTTGACCGAGAAG
TACCAGAGACAGGCATTCGGCCGGTATGGGGCCCAGAGCAATGTGAATCC
CAAGATTTGCTTCGATTCCCACGGAGAGAAAGACAGCAGGCAGGTTATGC
AACTAGAAACACTCCTGAAAATGCTGGAGAAGAACCGCGCGCAGAAGGCA
GAGGAGCTGGCAAGGATAAATGCCCGTGAAGAGGACATTGCGAAGAAGAT
GGAGAAGTTGACACAGTGGAAGGCGGACCTGCACGCGAAGATCGCTAAGC
GGGAGGCGGATGCAGCGGCAGCCATACAACGCAAGGAACGCCTGGTAGAG
GAGGTGCGCCGACACTTCGGGTTCAAGGTGGATACACGCGACGAACGCTT
TAAGGAAATGCTAGAGCAAAAAGAGAAGGAGGACAAGAAGAAGCAGAAGG
AGGCCAAGCGAAAGGCCAAGGAGGAGAAGATGATGGCCAAGCTGGTAGAG
AAAGCATCAGTGGCAAGCTTTCTAGACCAT
BO14048.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7172-RA | 699 | CG7172-PA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7172-RA | 840 | CG7172-RA | 66..761 | 17..712 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21568138..21568833 | 712..17 | 3480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:01:25 has no hits.
BO14048.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:16:59 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 69..783 | 6..721 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:49 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 66..761 | 17..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:47 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 62..757 | 17..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:58 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 66..761 | 17..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:58 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21568136..21568833 | 17..714 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:49 Download gff for
BO14048.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21561236..21561933 | 17..714 | 99 | | Minus |
BO14048.3prime Sequence
559 bp (503 high quality bases) assembled on 2006-05-29
> BO14048.3prime
ATGGTCTAGAAAGCTTGCCACTGATGCTTTCTCTACCAGCTTGGCCATCA
TCTTCTCCTCCTTGGCCTTTCGCTTGGCCTCCTTCTGCTTCTTCTTGTCC
TCCTTCTCTTTTTGCTCTAGCATTTCCTTAAAGCGTTCGTCGCGTGTATC
CACCTTGAACCCGAAGTGTCGGCGCACCTCCTCTACCAGGCGTTCCTTGC
GTTGTATGGCTGCCGCTGCATCCGCCTCCCGCTTAGCGATCTTCGCGTGC
AGGTCCGCCTTCCACTGTGTCAACTTCTCCATCTTCTTCGCAATGTCCTC
TTCACGGGCATTTATCCTTGCCAGCTCCTCTGCCTTCTGCGCGCGGTTCT
TCTCCAGCATTTTCAGGAGTGTTTCTAGTTGCATAACCTGCCTGCTGTCT
TTCTCTCCGTGGGAATCGAAGCAAAATCTTGGGATTCACATTGCTCTGGG
CCCCATACCGGCCGAATGCCTGTCTCTGGTACTTCTCGGTCAAATGAATC
CAGGAGTGAGGTTCCTGGTATGGCAATTTGTTAAGGAGCACATTTTTGTG
TTGTGGTTG
BO14048.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7172-PA | 699 | CG7172-RA | 290..696 | 425..19 | 2035 | 100 | Minus |
CG7172-PA | 699 | CG7172-RA | 157..292 | 559..424 | 680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:09:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7172-RA | 840 | CG7172-RA | 222..761 | 559..19 | 2680 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:09:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21568138..21568677 | 19..559 | 2655 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:09:24 has no hits.
BO14048.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:47 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-PA | 157..699 | 15..559 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:37 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-PA | 157..699 | 15..559 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:36:38 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 222..769 | 10..559 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:36:36 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7172-RA | 222..769 | 10..559 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:36:36 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21568130..21568677 | 10..559 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:36:38 Download gff for
BO14048.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21561230..21561777 | 10..559 | 99 | | Plus |
BO14048.pep Sequence
Translation from 16 to 730
> BO14048.pep
MNVGKISVVTRLPALRSCAQYSSAAKAELPASLVGDVDVEPTYPQTVDRS
GLQPQHKNVLLNKLPYQEPHSWIHLTEKYQRQAFGRYGAQSNVNPKICFD
SHGEKDSRQVMQLETLLKMLEKNRAQKAEELARINAREEDIAKKMEKLTQ
WKADLHAKIAKREADAAAAIQRKERLVEEVRRHFGFKVDTRDERFKEMLE
QKEKEDKKKQKEAKRKAKEEKMMAKLVEKASVASFLDH
BO14048.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7172-PA | 232 | CG7172-PA | 1..232 | 1..232 | 1177 | 100 | Plus |