Clone BO14053 Report

Search the DGRC for BO14053

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:53
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14053.pep: validated full length
Sequenced Size:364

Clone Sequence Records

BO14053.3prime Sequence

362 bp (361 high quality bases) assembled on 2006-05-29

> BO14053.3prime
ATGGTCTAGAAAGCTTGCGTCAGTCCGGGCAGCTTTGGGAATGGTTTTCA
CTTGGGCCTGGGTTGGATTCTGTCTGAGGGCTTGGGATTGGGATTCGGCT
TGGGTTTGGCACTGGCACTGAACCTGCTGCGACCATAAATTCCATTGATT
GTCGCGCCAGCGTTTTGTATGACAAGTTCGAAGTCTTGTATTGTCTGTCG
CCTCGTTTTGTCTTGCGTTTGTATGACTTCTGGTACCAGCCAGCCACACC
CTGTCCCCTGGAGTCCCCGGAAACCCCCTGATGGCCTCTGAGAAGCCCCC
CTTTAACCCCCTGAAACTCCACCTCTGCTGCCACTCACCTGCCAGCATGT
CGACTGATAACT

BO14053.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32399-PA 333 CG32399-RA 1..330 348..19 1650 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-03 06:45:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6344563..6344892 19..348 1650 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:45:11 has no hits.

BO14053.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:53 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32399-PA 1..333 16..348 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:48 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32399-PA 1..333 16..348 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:40:40 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6344563..6344899 19..356 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:40:40 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6344563..6344899 19..356 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:24:57 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337663..6337999 19..356 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:24:57 Download gff for BO14053.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337663..6337999 19..356 99   Plus

BO14053.5prime Sequence

362 bp (361 high quality bases) assembled on 2006-05-29

> BO14053.5prime
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACGCAA
GCTTTCTAGACC

BO14053.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32399-PA 333 CG32399-RA 1..330 17..346 1650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 07:38:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:38:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6344563..6344892 346..17 1650 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:38:55 has no hits.

BO14053.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:54 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32399-PA 1..333 17..349 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:49 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32399-PA 1..333 17..349 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:19 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6344563..6344899 9..346 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:19 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6344563..6344899 9..346 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:32:48 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337663..6337999 9..346 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:32:48 Download gff for BO14053.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337663..6337999 9..346 99   Minus

BO14053.complete Sequence

364 bp assembled on 2006-10-11

GenBank Submission: FJ633009

> BO14053.complete
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACGCAA
GCTTTCTAGACCAT

BO14053.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 22:19:17 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 22:19:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6344563..6344892 346..17 1650 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:19:16 has no hits.

BO14053.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:22:37 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
CG34382-RC 1590..1615 260..285 92   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:22:37 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
CG34382-RC 2145..2170 260..285 92   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:35 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6344559..6344892 17..348 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:35 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6344559..6344892 17..348 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:14 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337659..6337992 17..348 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:14 Download gff for BO14053.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6337659..6337992 17..348 99   Minus

BO14053.pep Sequence

Translation from 16 to 364

> BO14053.pep
MLAGEWQQRWSFRGLKGGFSEAIRGFPGTPGDRVWLAGTRSHTNARQNEA
TDNTRLRTCHTKRWRDNQWNLWSQQVQCQCQTQAESQSQALRQNPTQAQV
KTIPKAARTDASFLDH
Sequence BO14053.pep has no blast hits.