Clone Sequence Records
BO14053.3prime Sequence
362 bp (361 high quality bases) assembled on 2006-05-29
> BO14053.3prime
ATGGTCTAGAAAGCTTGCGTCAGTCCGGGCAGCTTTGGGAATGGTTTTCA
CTTGGGCCTGGGTTGGATTCTGTCTGAGGGCTTGGGATTGGGATTCGGCT
TGGGTTTGGCACTGGCACTGAACCTGCTGCGACCATAAATTCCATTGATT
GTCGCGCCAGCGTTTTGTATGACAAGTTCGAAGTCTTGTATTGTCTGTCG
CCTCGTTTTGTCTTGCGTTTGTATGACTTCTGGTACCAGCCAGCCACACC
CTGTCCCCTGGAGTCCCCGGAAACCCCCTGATGGCCTCTGAGAAGCCCCC
CTTTAACCCCCTGAAACTCCACCTCTGCTGCCACTCACCTGCCAGCATGT
CGACTGATAACT
BO14053.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32399-PA | 333 | CG32399-RA | 1..330 | 348..19 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-03 06:45:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:45:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344563..6344892 | 19..348 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:45:11 has no hits.
BO14053.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:53 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 16..348 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:48 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 16..348 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:40:40 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344563..6344899 | 19..356 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 09:40:40 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344563..6344899 | 19..356 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:24:57 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337663..6337999 | 19..356 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:24:57 Download gff for
BO14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337663..6337999 | 19..356 | 99 | | Plus |
BO14053.5prime Sequence
362 bp (361 high quality bases) assembled on 2006-05-29
> BO14053.5prime
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACGCAA
GCTTTCTAGACC
BO14053.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32399-PA | 333 | CG32399-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 07:38:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:38:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344563..6344892 | 346..17 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:38:55 has no hits.
BO14053.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:54 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 17..349 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:49 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 17..349 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:19 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344563..6344899 | 9..346 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:19 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344563..6344899 | 9..346 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:32:48 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337663..6337999 | 9..346 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:32:48 Download gff for
BO14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337663..6337999 | 9..346 | 99 | | Minus |
BO14053.complete Sequence
364 bp assembled on 2006-10-11
GenBank Submission: FJ633009
> BO14053.complete
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACGCAA
GCTTTCTAGACCAT
BO14053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 22:19:17 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 22:19:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:19:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344563..6344892 | 346..17 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:19:16 has no hits.
BO14053.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:22:37 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 1590..1615 | 260..285 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:22:37 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 2145..2170 | 260..285 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:35 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344559..6344892 | 17..348 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:35 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344559..6344892 | 17..348 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:14 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337659..6337992 | 17..348 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:14 Download gff for
BO14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337659..6337992 | 17..348 | 99 | | Minus |
BO14053.pep Sequence
Translation from 16 to 364
> BO14053.pep
MLAGEWQQRWSFRGLKGGFSEAIRGFPGTPGDRVWLAGTRSHTNARQNEA
TDNTRLRTCHTKRWRDNQWNLWSQQVQCQCQTQAESQSQALRQNPTQAQV
KTIPKAARTDASFLDH
Sequence BO14053.pep has no blast hits.