Clone BO14055 Report

Search the DGRC for BO14055

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptInvadolysin-RA
Protein status:BO14055.pep: Imported from assembly
Sequenced Size:2083

Clone Sequence Records

BO14055.3prime Sequence

607 bp (528 high quality bases) assembled on 2006-05-29

> BO14055.3prime
ATGGTCTAGAAAGCTTGCACTGAATCCCCATCGCAGGCCGAAAAGCAGCA
GTACAGCGGTGATTATGGCCACGGAACGTGATTTCTCACTGCCCGCTCCA
CAGGCGAGGTTGTCGCGCGGGTACTTATTGAGCGGATCGGGCTCCTCGCC
CGGACGACACTGCTTGCCCTGAGCAGCAAATTGTGCTCCGCACAGCTCGT
GGCACGGCGGGCACATGATCGCGCCCTTGTGCAGCCATCCATTGGCCGCA
ATTCGAATAGAAAGCTTCTGCCCGGGAAAGGAGCACTTGTAGCTATAGTT
GCCCACCAGGATGTGCAGTCGCCCGTCGAAGCAATCGTACTTGTAGCATC
CGCTGCCCCAATGCTGCCACTCACGCGTCTGGTGACAGGATCGCTCCTCC
CACATCGATTCGCTGTGATCAAAGCACTTTGCTCCCTCGCCATAGCTCTC
CAAGGCGAAGTTCTTTTCAGGCCTGGGATTATTCTCTGTAAATCGACAAT
GAGATCCGCGCACTATCACGTTCTTGCTGCGCCAGGTAAACTCCTGAATG
TAGGGACAGTGATCGGCCAGCGAAACCGAGCCGCCGTAGAACCCCTCCTC
GCCGTCC

BO14055.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG3953-PA 2052 l(3)IX-14-RA 1461..2049 607..19 2945 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Invadolysin-RA 3610 CG3953-RA 2194..2782 607..19 2945 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10157852..10158306 473..19 2275 100 Minus
3R 32079331 3R 10157655..10157789 607..473 675 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:00:14 has no hits.

BO14055.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:55 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3953-PA 1461..2052 18..607 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:50 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3953-PA 1461..2052 18..607 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:46:11 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 2194..2788 12..607 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:00:16 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 2194..2788 12..607 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:00:16 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10157655..10157788 474..607 100 -> Minus
3R 10157852..10158312 12..473 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:46:11 Download gff for BO14055.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5983377..5983510 474..607 100 -> Minus
arm_3R 5983574..5984034 12..473 99   Minus

BO14055.5prime Sequence

664 bp (578 high quality bases) assembled on 2006-05-29

> BO14055.5prime
GAAGTTATCAGTCGACATGGCCAAAACGCCCCCGCTCCGCCCCCACGGTA
ACATGGCCAAATTCCTGGCAGCCCTCGGCATCTGCTCTTGGCTCCTCGTT
TCGGCCACCGCTCACAACTGCCAACACCAGCATCCAAAGGCCCACGAGGT
CGTCCATGGCGTGCGCATCCAACTGGCTGATAGCGAAGATGACTCCGCCG
GAGATCCAGCGAGGCATAGCGTCCGACGGCGCAGCGTTGCCGCCGAGCAG
CCACTGCGAATTCTGCTCGTCTACGACGAATCCGTCTACAGGCTGGAAGA
AGAGAAATTTAATTTGATAAATGACACCGTTCTCCCGGAAGCCGTGCAGT
TCTGGGAACAGGCCCTGATGGTGCGAGAGACCAAGGGCGTTATCCGACTC
AATAGGAAATGCGACAGCACGCAGGTGTACGTGAAAAACGGACACACCCA
CTGCATCGACCATTGCAAGGCGACGACGATGTGCGGCGAGGTTCAGGTGC
CCGATGCGCACTTGGATGTATGTCGGGTGTGCAATGCCACGGGTCAGAAT
TGTAGAATCGATAGTAACACACAGCCGGGCGAAGGAATTGAGAATGCGGA
CTTTGTGTTCTACGTGTCCGCCAGGCAGACGCAGCGTTGTTTCAAGGGTC
TAACCGTTGCCTAT

BO14055.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3953-PA 2052 l(3)IX-14-RA 1..648 17..664 3240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:38:44
Subject Length Description Subject Range Query Range Score Percent Strand
Invadolysin-RA 3610 CG3953-RA 733..1381 16..664 3245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10156576..10156722 518..664 735 100 Plus
3R 32079331 3R 10154222..10154367 147..292 730 100 Plus
3R 32079331 3R 10145400..10145534 16..150 675 100 Plus
3R 32079331 3R 10155975..10156091 404..520 585 100 Plus
3R 32079331 3R 10155822..10155905 323..406 420 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:38:42 has no hits.

BO14055.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:17:56 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3953-PA 1..648 17..664 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:52 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3953-PA 1..648 17..664 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:58:16 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 730..1381 9..664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:45:50 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 730..1381 9..664 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:45:50 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10145397..10145532 9..148 97 -> Plus
3R 10154224..10154366 149..291 100 -> Plus
3R 10155712..10155742 292..322 100 -> Plus
3R 10155822..10155904 323..405 100 -> Plus
3R 10155977..10156088 406..517 100 -> Plus
3R 10156576..10156722 518..664 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:58:16 Download gff for BO14055.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5982298..5982444 518..664 100   Plus
arm_3R 5971119..5971254 9..148 97 -> Plus
arm_3R 5979946..5980088 149..291 100 -> Plus
arm_3R 5981434..5981464 292..322 100 -> Plus
arm_3R 5981544..5981626 323..405 100 -> Plus
arm_3R 5981699..5981810 406..517 100 -> Plus

BO14055.complete Sequence

2083 bp assembled on 2008-08-14

GenBank Submission: FJ633010

> BO14055.complete
GAAGTTATCAGTCGACATGGCCAAAACGCCCCCGCTCCGCCCCCACGGTA
ACATGGCCAAATTCCTGGCAGCCCTCGGCATCTGCTCTTGGCTCCTCGTT
TCGGCCACCGCTCACAACTGCCAACACCAGCATCCAAAGGCCCACGAGGT
CGTCCATGGCGTGCGCATCCAACTGGCTGATAGCGAAGATGACTCCGCCG
GAGATCCAGCGAGGCATAGCGTCCGACGGCGCAGCGTTGCCGCCGAGCAG
CCACTGCGAATTCTGCTCGTCTACGACGAATCCGTCTACAGGCTGGAAGA
AGAGAAATTTAATTTGATAAATGACACCGTTCTCCCGGAAGCCGTGCAGT
TCTGGGAACAGGCCCTGATGGTGCGAGAGACCAAGGGCGTTATCCGACTC
AATAGGAAATGCGACAGCACGCAGGTGTACGTGAAAAACGGACACACCCA
CTGCATCGACCATTGCAAGGCGACGACGATGTGCGGCGAGGTTCAGGTGC
CCGATGCGCACTTGGATGTATGTCGGGTGTGCAATGCCACGGGTCAGAAT
TGTAGAATCGATAGTAACACACAGCCGGGCGAAGGAATTGAGAATGCGGA
CTTTGTGTTCTACGTGTCCGCCAGGCAGACGCAGCGTTGTTTCAAGGGTC
TAACCGTTGCCTATGCGGCCCATTGTCAACAGGAAGCGGCTCTGGATCGT
CCAATCGCCGGTCATGCGAATCTCTGTCCGGAGAGCATTAGCACAAAGCC
GCAGGAACTGCAGACACTGATCTCCACCGTAAAGCACGAGATTCTCCATG
CACTGGGATTCTCCGTGAGCTTGTACGCATTCTTTAGGGACGATGATGGA
AAACCCCGAACGCCCCGAAAATTAGACACTGGCAAGCCGTACCTGAATGA
AAAATTGCAGATCCATCAGTGGAGCAACGAGACCATTCGCAAGGTGGTGC
GAGAGAACTGGTCTGTGCGTGGTGGCCATGTTAACAAGGTAGTGGACATG
ATGGTCACGCCTCGCGTAATTGCCGAGGTGCGCGCCCACTTTAACTGCAA
TAAGTTGGAGGGCGCCGAGCTGGAGGATCAGGGTGGCGAAGGTACCGCCC
TGACCCACTGGGAAAAGCGCATCCTGGAGAATGAGGCCATGACTGGCACG
CACACACAGTCGCCGGTCTTCTCGCGCATCACCCTTGCATTGATGGAGGA
TTCCGGCTGGTATCGGGCCAACTACTCCATGGCAACGCCGCTGACTTGGG
GCAAGGGACTGGGATGTGCGTTTGCTATGCGTAGTTGCAAGGATTGGATA
CAGTACAACCATGCTAGGGGTCGCTCTATACATCCCTTCTGCTCGAAGGT
CAAGCAGGATCCCCTCCAAACCGAATGCACAGATGATCGCAACTCTGTGG
CGCTTTGCAATCTTATCCGCCATGAGTTTGAGCTGCCCAAAGGCTATCAG
AACTTCGACAGCCTAAATCATGTGAAGGACGGCGAGGAGGGGTTCTACGG
CGGCTCGGTTTCGCTGGCCGATCACTGTCCCTACATTCAGGAGTTTACCT
GGCGCAGCAAGAACGTGATAGTGCGCGGATCTCATTGTCGATTTACAGAG
AATAATCCCAGGCCTGAAAAGAACTTCGCCTTGGAGAGCTATGGCGAGGG
AGCAAAGTGCTTTGATCACAGCGAATCGATGTGGGAGGAGCGATCCTGTC
ACCAGACGCGTGAGTGGCAGCATTGGGGCAGCGGATGCTACAAGTACGAT
TGCTTCGACGGGCGACTGCACATCCTGGTGGGCAACTATAGCTACAAGTG
CTCCTTTCCCGGGCAGAAGCTTTCTATTCGAATTGCGGCCAATGGATGGC
TGCACAAGGGCGCGATCATGTGCCCGCCGTGCCACGAGCTGTGCGGAGCA
CAATTTGCTGCTCAGGGCAAGCAGTGTCGTCCGGGCGAGGAGCCCGATCC
GCTCAATAAGTACCCGCGCGACAACCTCGCCTGTGGAGCGGGCAGTGAGA
AATCACGTTCCGTGGCCATAATCACCGCTGTACTGCTGCTTTTCGGCCTG
CGATGGGGATTCAGTGCAAGCTTTCTAGACCAT

BO14055.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
Invadolysin-RA 2052 CG3953-PA 1..2049 17..2065 10245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
Invadolysin-RA 3610 CG3953-RA 733..2782 16..2065 10250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10157852..10158306 1611..2065 2275 100 Plus
3R 32079331 3R 10157017..10157431 904..1318 2075 100 Plus
3R 32079331 3R 10156576..10156961 518..903 1930 100 Plus
3R 32079331 3R 10157494..10157789 1316..1611 1480 100 Plus
3R 32079331 3R 10154222..10154367 147..292 730 100 Plus
3R 32079331 3R 10145400..10145534 16..150 675 100 Plus
3R 32079331 3R 10155975..10156091 404..520 585 100 Plus
3R 32079331 3R 10155822..10155905 323..406 420 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:52:28 has no hits.

BO14055.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:39:26 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 699..2757 9..2072 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:16 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 734..2782 17..2067 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:00:22 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 703..2751 17..2067 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:49 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
Invadolysin-RA 734..2782 17..2067 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:49 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10155977..10156088 406..517 100 -> Plus
3R 10156576..10156961 518..903 100 -> Plus
3R 10157017..10157430 904..1317 100 -> Plus
3R 10145401..10145532 17..148 100 -> Plus
3R 10154224..10154366 149..291 100 -> Plus
3R 10155712..10155742 292..322 100 -> Plus
3R 10155822..10155904 323..405 100 -> Plus
3R 10157496..10157788 1318..1610 100 -> Plus
3R 10157852..10158306 1611..2067 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:16 Download gff for BO14055.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5981699..5981810 406..517 100 -> Plus
arm_3R 5971123..5971254 17..148 100 -> Plus
arm_3R 5979946..5980088 149..291 100 -> Plus
arm_3R 5981434..5981464 292..322 100 -> Plus
arm_3R 5981544..5981626 323..405 100 -> Plus
arm_3R 5982298..5982683 518..903 100 -> Plus
arm_3R 5982739..5983152 904..1317 100 -> Plus
arm_3R 5983218..5983510 1318..1610 100 -> Plus
arm_3R 5983574..5984028 1611..2067 99   Plus

BO14055.pep Sequence

Translation from 16 to 2083

> BO14055.pep
MAKTPPLRPHGNMAKFLAALGICSWLLVSATAHNCQHQHPKAHEVVHGVR
IQLADSEDDSAGDPARHSVRRRSVAAEQPLRILLVYDESVYRLEEEKFNL
INDTVLPEAVQFWEQALMVRETKGVIRLNRKCDSTQVYVKNGHTHCIDHC
KATTMCGEVQVPDAHLDVCRVCNATGQNCRIDSNTQPGEGIENADFVFYV
SARQTQRCFKGLTVAYAAHCQQEAALDRPIAGHANLCPESISTKPQELQT
LISTVKHEILHALGFSVSLYAFFRDDDGKPRTPRKLDTGKPYLNEKLQIH
QWSNETIRKVVRENWSVRGGHVNKVVDMMVTPRVIAEVRAHFNCNKLEGA
ELEDQGGEGTALTHWEKRILENEAMTGTHTQSPVFSRITLALMEDSGWYR
ANYSMATPLTWGKGLGCAFAMRSCKDWIQYNHARGRSIHPFCSKVKQDPL
QTECTDDRNSVALCNLIRHEFELPKGYQNFDSLNHVKDGEEGFYGGSVSL
ADHCPYIQEFTWRSKNVIVRGSHCRFTENNPRPEKNFALESYGEGAKCFD
HSESMWEERSCHQTREWQHWGSGCYKYDCFDGRLHILVGNYSYKCSFPGQ
KLSIRIAANGWLHKGAIMCPPCHELCGAQFAAQGKQCRPGEEPDPLNKYP
RDNLACGAGSEKSRSVAIITAVLLLFGLRWGFSASFLDH

BO14055.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
Invadolysin-PA 683 CG3953-PA 1..683 1..683 3736 100 Plus