Clone Sequence Records
BO14062.3prime Sequence
709 bp (620 high quality bases) assembled on 2006-05-29
> BO14062.3prime
ATGGTCTAGAAAGCTTGCTTCGTTCGCCAGCTCATCAATGCGACACCGCA
CAGCGTGCTCCAGAACCTCCAGACTGGCGTAGTCTAACTCCTTCACCAAA
CACAGCGCGGCGGAGAGAATATTTGAATTCCTATTTATGGGCCTGCGATG
GTAGCCCGAGTAGTGATTCATCACAGAGGCCGACAATGACGAGGTCCCAT
CACTATATCTTCCCTCGGGTCGCCTCGCCCTCGACCTGTCCTCCGGATCC
CATTCGCCGCCGTTCTCCCGGGCACTGCCGTTACGATAGGGCGTCATCTC
CGGACCTGCGCTGCGTCGCTGCGGCTGGTGCAACTGCTTCTGGCTGCCAT
AGGGATTGTGGTGCACCTGGGGCACCTGCTGGTGCTCCTCCCACTCGGTT
AGGTCCGTCTGGCTGTGGCGGTAGTGCGCCGGGTAGGCGGGTCTGTCCGA
CTGGTAGTATTCCTTCATCGAGTGCGCAGAAATGCTGGGCGGGAACGGCG
TGGGCCGCACCTCCCTGTACGTGTGCGGACTACTCTCCTGGTCGGATCCC
GGCGAGCGATCGTACTGGTGGTAGGAGGTGCGCTGCTCTTTGGTTATGGT
GTTATACATGGGCGATGGCGGATGCACGGGTTCCTCTTTCGTGGGAGTGG
TGCAGCCGCCCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGATATTGC
TGCTGCCGC
BO14062.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PC | 1236 | CG14995-RC | 546..1233 | 706..19 | 3415 | 99.8 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 746..1362 | 635..19 | 3085 | 100 | Minus |
| CG14995-PB | 1170 | CG14995-RB | 722..1167 | 464..19 | 2230 | 100 | Minus |
| CG14995-PD | 1065 | CG14995-RD | 617..1062 | 464..19 | 2230 | 100 | Minus |
| CG14995-PB | 1170 | CG14995-RB | 651..726 | 706..631 | 355 | 98.6 | Minus |
| CG14995-PD | 1065 | CG14995-RD | 546..621 | 706..631 | 355 | 98.6 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 546..618 | 706..634 | 340 | 98.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:17:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RC | 3043 | CG14995-RC | 1687..2374 | 706..19 | 3425 | 99.9 | Minus |
| CG14995-RI | 3067 | CG14995-RI | 1687..2398 | 706..19 | 3175 | 96.5 | Minus |
| CG14995-RA | 3435 | CG14995-RA | 2150..2766 | 635..19 | 3085 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4095635..4095876 | 223..464 | 1210 | 100 | Plus |
| 3L | 28110227 | 3L | 4095012..4095123 | 19..130 | 560 | 100 | Plus |
| 3L | 28110227 | 3L | 4095971..4096067 | 462..558 | 485 | 100 | Plus |
| 3L | 28110227 | 3L | 4095200..4095295 | 130..225 | 480 | 100 | Plus |
| 3L | 28110227 | 3L | 4096904..4096980 | 559..635 | 385 | 100 | Plus |
| 3L | 28110227 | 3L | 4097506..4097579 | 633..706 | 355 | 98.6 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:17:39 has no hits.
BO14062.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:05 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PC | 543..1236 | 16..709 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:04 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PC | 543..1236 | 16..709 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:55:47 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1684..2374 | 19..709 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:08 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1684..2374 | 19..709 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:08 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095012..4095122 | 19..129 | 100 | <- | Plus |
| 3L | 4095200..4095293 | 130..223 | 100 | <- | Plus |
| 3L | 4095636..4095874 | 224..462 | 100 | <- | Plus |
| 3L | 4095972..4096067 | 463..558 | 100 | <- | Plus |
| 3L | 4096904..4096978 | 559..633 | 100 | <- | Plus |
| 3L | 4097507..4097582 | 634..709 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:55:47 Download gff for
BO14062.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095012..4095122 | 19..129 | 100 | <- | Plus |
| arm_3L | 4095200..4095293 | 130..223 | 100 | <- | Plus |
| arm_3L | 4095636..4095874 | 224..462 | 100 | <- | Plus |
| arm_3L | 4095972..4096067 | 463..558 | 100 | <- | Plus |
| arm_3L | 4096904..4096978 | 559..633 | 100 | <- | Plus |
| arm_3L | 4097507..4097582 | 634..709 | 97 | | Plus |
BO14062.5prime Sequence
696 bp (671 high quality bases) assembled on 2006-05-29
> BO14062.5prime
GAAGTTATCAGTCGACATGTCGAGACTCACCGAGGAAATGGTGATAGCGC
GGGCCAAGCAATCCGATTTGTCCCTGATCAAAAAGCTAAATTGCTGGGGC
AGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTGGAAGT
TCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGAGGATT
GCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTGACATC
AACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTCTGGCT
GGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTCGATCG
TATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGGTCACA
CAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCACCCGA
GGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAGGCGAT
CATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGCAACAC
TCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCACCAGCAGCA
GCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAACCCGTGCATCCGC
CATCGCCCATGTATAACACCATAACCAAAGAGCAGCCGCACCTCCT
BO14062.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PC | 1236 | CG14995-RC | 1..670 | 17..686 | 3325 | 99.8 | Plus |
| CG14995-PD | 1065 | CG14995-RD | 1..621 | 17..637 | 3080 | 99.8 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 1..618 | 17..634 | 3065 | 99.8 | Plus |
| CG14995-PB | 1170 | CG14995-RB | 185..726 | 96..637 | 2685 | 99.8 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 746..799 | 633..686 | 270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:55:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RI | 3067 | CG14995-RI | 1142..1820 | 17..696 | 3360 | 99.7 | Plus |
| CG14995-RC | 3043 | CG14995-RC | 1142..1820 | 17..696 | 3360 | 99.7 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1636..2256 | 17..637 | 3090 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 635..337 | 1480 | 99.7 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 336..161 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4101476..4101556 | 97..17 | 405 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 162..96 | 335 | 100 | Minus |
| 3L | 28110227 | 3L | 4096927..4096980 | 686..633 | 270 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 19:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 459..607 | 294 | 69.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6946 | 474..652 | 273 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 474..608 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6894 | 472..620 | 270 | 68 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6739..6890 | 505..656 | 264 | 65.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6938 | 474..608 | 260 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 474..608 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 474..608 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2399..2535 | 472..608 | 225 | 64.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 474..629 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 473..608 | 197 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..2965 | 474..620 | 195 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7018 | 474..652 | 144 | 56.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 474..549 | 136 | 67.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1089..1157 | 474..541 | 108 | 63.8 | Plus |
BO14062.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:06 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PC | 1..679 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:05 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PC | 1..679 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:11:36 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1136..1820 | 9..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:07:45 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1136..1820 | 9..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:07:45 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4098026..4098199 | 163..336 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 97..162 | 100 | <- | Minus |
| 3L | 4101477..4101560 | 9..96 | 95 | | Minus |
| 3L | 4096918..4096978 | 635..696 | 98 | <- | Minus |
| 3L | 4097507..4097804 | 337..634 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:11:36 Download gff for
BO14062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4101477..4101560 | 9..96 | 95 | | Minus |
| arm_3L | 4096918..4096978 | 635..696 | 98 | <- | Minus |
| arm_3L | 4097507..4097804 | 337..634 | 99 | <- | Minus |
| arm_3L | 4098026..4098199 | 163..336 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 97..162 | 100 | <- | Minus |
BO14062.complete Sequence
1267 bp assembled on 2006-12-18
GenBank Submission: FJ633014
> BO14062.complete
GAAGTTATCAGTCGACATGTCGAGACTCACCGAGGAAATGGTGATAGCGC
GGGCCAAGCAATCCGATTTGTCCCTGATCAAAAAGCTAAATTGCTGGGGC
AGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTGGAAGT
TCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGAGGATT
GCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTGACATC
AACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTCTGGCT
GGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTCGATCG
TATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGGTCACA
CAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCACCCGA
GGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAGGCGAT
CATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGCAACAC
TCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAGCAGCA
GCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAACCCGTGCATCCGC
CATCGCCCATGTATAACACCATAACCAAAGAGCAGCGCACCTCCTACCAC
CAGTACGATCGCTCGCCGGGATCCGACCAGGAGAGTAGTCCGCACACGTA
CAGGGAGGTGCGGCCCACGCCGTTCCCGCCCAGCATTTCTGCGCACTCGA
TGAAGGAATACTACCAGTCGGACAGACCCGCCTACCCGGCGCACTACCGC
CACAGCCAGACGGACCTAACCGAGTGGGAGGAGCACCAGCAGGTGCCCCA
GGTGCACCACAATCCCTATGGCAGCCAGAAGCAGTTGCACCAGCCGCAGC
GACGCAGCGCAGGTCCGGAGATGACGCCCTATCGTAACGGCAGTGCCCGG
GAGAACGGCGGCGAATGGGATCCGGAGGACAGGTCGAGGGCGAGGCGACC
CGAGGGAAGATATAGTGATGGGACCTCGTCATTGTCGGCCTCTGTGATGA
ATCACTACTCGGGCTACCATCGCAGGCCCATAAATAGGAATTCAAATATT
CTCTCCGCCGCGCTGTGTTTGGTGAAGGAGTTAGACTACGCCAGTCTGGA
GGTTCTGGAGCACGCTGTGCGGTGTCGCATTGATGAGCTGGCGAACGAAG
CAAGCTTTCTAGACCAT
BO14062.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:14:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RC | 1236 | CG14995-PC | 1..1233 | 17..1249 | 6165 | 100 | Plus |
| CG14995-RI | 1260 | CG14995-PI | 1..1122 | 17..1138 | 5610 | 100 | Plus |
| CG14995-RG | 1089 | CG14995-PG | 1..621 | 17..637 | 3105 | 100 | Plus |
| CG14995-RI | 1260 | CG14995-PI | 1146..1257 | 1138..1249 | 560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RC | 3043 | CG14995-RC | 1142..2374 | 17..1249 | 6165 | 100 | Plus |
| CG14995-RI | 3067 | CG14995-RI | 1142..2263 | 17..1138 | 5610 | 100 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1636..2256 | 17..637 | 3105 | 100 | Plus |
| CG14995-RI | 3067 | CG14995-RI | 2287..2398 | 1138..1249 | 560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 635..337 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 4095635..4095876 | 1045..804 | 1210 | 100 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 336..161 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4095012..4095123 | 1249..1138 | 560 | 100 | Minus |
| 3L | 28110227 | 3L | 4095971..4096067 | 806..710 | 485 | 100 | Minus |
| 3L | 28110227 | 3L | 4095200..4095295 | 1138..1043 | 480 | 100 | Minus |
| 3L | 28110227 | 3L | 4101476..4101556 | 97..17 | 405 | 100 | Minus |
| 3L | 28110227 | 3L | 4096904..4096980 | 709..633 | 385 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 162..96 | 335 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 15:14:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 459..607 | 303 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6946 | 474..652 | 273 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 474..608 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6938 | 474..608 | 269 | 67.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 474..608 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 474..608 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 474..629 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..2965 | 474..620 | 204 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 473..605 | 199 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7018 | 474..652 | 137 | 57.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 474..549 | 136 | 67.5 | Plus |
BO14062.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:12:17 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1..1236 | 17..1252 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:30:34 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1136..2374 | 9..1249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:38:47 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1142..2374 | 17..1251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:12:17 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1136..2374 | 9..1249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:08 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RC | 1142..2374 | 17..1251 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:08 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095009..4095122 | 1139..1251 | 98 | <- | Minus |
| 3L | 4095200..4095293 | 1045..1138 | 100 | <- | Minus |
| 3L | 4095636..4095874 | 806..1044 | 100 | <- | Minus |
| 3L | 4095972..4096067 | 710..805 | 100 | <- | Minus |
| 3L | 4096904..4096978 | 635..709 | 100 | <- | Minus |
| 3L | 4097507..4097804 | 337..634 | 100 | <- | Minus |
| 3L | 4098026..4098199 | 163..336 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 97..162 | 100 | <- | Minus |
| 3L | 4101477..4101556 | 17..96 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:38:47 Download gff for
BO14062.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095009..4095122 | 1139..1251 | 98 | <- | Minus |
| arm_3L | 4095200..4095293 | 1045..1138 | 100 | <- | Minus |
| arm_3L | 4098026..4098199 | 163..336 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 97..162 | 100 | <- | Minus |
| arm_3L | 4101477..4101556 | 17..96 | 100 | | Minus |
| arm_3L | 4095636..4095874 | 806..1044 | 100 | <- | Minus |
| arm_3L | 4095972..4096067 | 710..805 | 100 | <- | Minus |
| arm_3L | 4096904..4096978 | 635..709 | 100 | <- | Minus |
| arm_3L | 4097507..4097804 | 337..634 | 100 | <- | Minus |
BO14062.pep Sequence
Translation from 16 to 1267
> BO14062.pep
MSRLTEEMVIARAKQSDLSLIKKLNCWGSDLSDVSIIKRMRGVEVLALSV
NKISTLSTFEDCTKLQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPC
CERAGPNYRSIVLRALPNLKKLDNVEVTQQEVEDALRGGGVAAPEDEVYE
DAYQQQQQSRRSSPQQILQQQQHSYPQHSPPPQQQYQQQQQQQQQQQRGC
TTPTKEEPVHPPSPMYNTITKEQRTSYHQYDRSPGSDQESSPHTYREVRP
TPFPPSISAHSMKEYYQSDRPAYPAHYRHSQTDLTEWEEHQQVPQVHHNP
YGSQKQLHQPQRRSAGPEMTPYRNGSARENGGEWDPEDRSRARRPEGRYS
DGTSSLSASVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHA
VRCRIDELANEASFLDH
BO14062.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:31:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PC | 411 | CG14995-PC | 1..411 | 1..411 | 2181 | 100 | Plus |
| CG14995-PI | 419 | CG14995-PI | 1..419 | 1..411 | 2162 | 98.1 | Plus |
| CG14995-PA | 454 | CG14995-PA | 1..454 | 1..411 | 2127 | 90.5 | Plus |
| CG14995-PD | 354 | CG14995-PD | 1..354 | 1..411 | 1745 | 84.9 | Plus |
| CG14995-PG | 362 | CG14995-PG | 1..362 | 1..411 | 1726 | 83.3 | Plus |
