Clone BO14067 Report

Search the DGRC for BO14067

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG2698-RA
Protein status:BO14067.pep: Imported from assembly
Sequenced Size:2485

Clone Sequence Records

BO14067.3prime Sequence

755 bp (569 high quality bases) assembled on 2006-05-29

> BO14067.3prime
ATGGTCTAGAAAGCTTGCCGTGGTCCGCTCCTCGTCCGTACTGTTCCTGG
GCTCTTGATGACTGCGCATGGCCAGCGTGGCCACCTCAAAAAGGCCGATG
AAGAAGCAAAGCATAAGGGGTCCGAAAATAGCTCCTTGCCAACCGATCCA
ATACATTCCGCCTGCTATGGCCAGGCCGTTGAGGTAGGGATGTCCACCTT
TGAGGTCCGCATATATAGCAGTTTCAAAAGATGATGGCACGAAAAACTGA
AGCAGGAACAATATAAGTCCTGCATAGAAGCGGTCCTGGGCCAGCCAAAG
CTCTAGAAAGGCTGGCACCGCACACCAGTAACTGCCTAGGAAAGGAGCAG
CAGCCAACATAGCTGCCAAGGCGGACGGCAGGAACACAATCCGGGCCCCG
AAAACCGTATGGACTAACCAGGTGAACAGACCCGTAAAGGTGGAGCACCT
AAACATTGAGACTAGGACTACGGTAATGGAGTTTTCCAGGGCATCGGCGA
TTTTGATACCCGAGCTGGAATAGCCCAGGTATTTTGTGATCTGCAGGGGC
GCGTACTTCTCCTGACTGCTCGAGAGCAGGTAGAACAGAGCCGTAAAGAA
ATACAATCATATCTAGAATAAACTCAATGCACGCTTGTCCACCCGAAAAG
CACAAGGGATAGAATCTCCCCGGTCACGCCCATTTATCATGGACATGTTG
GCCCGGATGATGGTGCCCCACGACTCTGCAACCTCCAGGATCGTCTGCGT
ATTGC

BO14067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PA 2454 CG2698-RA 1870..2451 600..19 2910 100 Minus
CG2698-PA 2454 CG2698-RA 1823..1871 648..600 245 100 Minus
CG2698-PA 2454 CG2698-RA 1788..1825 684..647 190 100 Minus
CG2698-PA 2454 CG2698-RA 1718..1753 755..720 155 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RG 3138 CG2698-RG 1967..2700 755..19 3520 98.9 Minus
CG2698-RE 3162 CG2698-RE 1991..2724 755..19 3520 98.9 Minus
CG2698-RC 3377 CG2698-RC 2206..2939 755..19 3520 98.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8004244..8004647 600..197 2020 100 Minus
3R 32079331 3R 8004713..8004864 197..46 760 100 Minus
3R 32079331 3R 8004033..8004178 755..608 535 93.9 Minus
Blast to na_te.dros performed on 2015-02-10 23:32:33 has no hits.

BO14067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:12 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1718..2454 16..755 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:15 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1718..2454 16..755 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:18:14 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RC 2206..2945 11..755 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:04:11 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RC 2206..2945 11..755 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:04:11 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8004238..8004647 197..607 99 -> Minus
3R 8004714..8004863 47..196 100 -> Minus
3R 8004033..8004178 608..755 95 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:18:14 Download gff for BO14067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3829755..3829900 608..755 95 -> Minus
arm_3R 3829960..3830369 197..607 99 -> Minus
arm_3R 3830436..3830585 47..196 100 -> Minus

BO14067.5prime Sequence

591 bp (589 high quality bases) assembled on 2006-05-29

> BO14067.5prime
GAAGTTATCAGTCGACATGAATCGGTCCGAACCGATTCCCATTCGACGGG
ACCGCTCTTTTGACAGTGTGATCAACCGCCTGCTCCGTATGAGGTCCCAG
AATCATGAGAGCTTTCGCGCCGCCATGTACAATTTCCTGATCGCCGCAGG
AGTTGCGGCATTCGTCGCTGTGTGCTTCATTCTTGGGCCCTTCGTCCGTC
CATTGCTGTGGGCCTTCCTCATGGGCGCCGTGCTCTTTCCATTCAAGCGA
CGTTTGGCGGAGAGCGTAAACAGTTGGTTTCACCGCTTGGAGGTGCGCGA
CTCCAATGTACTGGTTTCGATCTGCCTATCGCCGCTGGAAGCCACAGAGC
ATTGCGGGCGGTTGCTGATCGGGTGGCTCTGCGAACACTGGCAACTCCTC
CTGGCCGGATGCGGAGTGGCCGGGTGCATTAAGCTGCTGGTTTTATATGC
ACCGAAGGGTTTTCTGCTGGCCATCTGGCATTGGATCACCTTTTCCCATG
GCTTGTTCGTTCAAATTATTGGATTCCTCAACGTATACGTGCTCATTTCC
TTGATCGTGGTCTACTTGAGCTGCGTCCACTTCTTTTGGAG

BO14067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PA 2454 CG2698-RA 1..575 17..591 2875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RI 3147 CG2698-RI 262..836 17..591 2875 100 Plus
CG2698-RH 2976 CG2698-RH 262..836 17..591 2875 100 Plus
CG2698-RG 3138 CG2698-RG 262..836 17..591 2875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:16:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8001922..8002458 17..553 2640 99.4 Plus
3R 32079331 3R 8002553..8002603 541..591 255 100 Plus
Blast to na_te.dros performed on 2015-02-09 11:16:05 has no hits.

BO14067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:13 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1..575 17..591 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:16 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1..575 17..591 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:43:23 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RG 262..836 17..591 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:43:55 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RG 262..836 17..591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:43:55 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8001922..8002446 17..541 100 -> Plus
3R 8002554..8002603 542..591 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:43:23 Download gff for BO14067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3828276..3828325 542..591 100   Plus
arm_3R 3827644..3828168 17..541 100 -> Plus

BO14067.complete Sequence

2485 bp assembled on 2008-08-14

GenBank Submission: FJ633015

> BO14067.complete
GAAGTTATCAGTCGACATGAATCGGTCCGAACCGATTCCCATTCGACGGG
ACCGCTCTTTTGACAGTGTGATCAACCGCCTGCTCCGTATGAGGTCCCAG
AATCATGAGAGCTTTCGCGCCGCCATGTACAATTTCCTGATCGCCGCAGG
AGTTGCGGCATTCGTCGCTGTGTGCTTCATTCTTGGGCCCTTCGTCCGTC
CATTGCTGTGGGCCTTCCTCATGGGCGCCGTGCTCTTTCCATTCAAGCGA
CGTTTGGCGGAGAGCGTAAACAGTTGGTTTCACCGCTTGGAGGTGCGCGA
CTCCAATGTACTGGTTTCGATCTGCCTATCGCCGCTGGAAGCCACAGAGC
ATTGCGGGCGGTTGCTGATCGGGTGGCTCTGCGAACACTGGCAACTCCTC
CTGGCCGGATGCGGAGTGGCCGGGTGCATTAAGCTGCTGGTTTTATATGC
ACCGAAGGGTTTTCTGCTGGCCATCTGGCATTGGATCACCTTTTCCCATG
GCTTGTTCGTTCAAATTATTGGATTCCTCAACGTATACGTGCTCATTTCC
TTGATCGTGGTCTACTTGAGCTGCGTCCACTTCTTTTGGAGGCCAGAGAA
TAGTGCCCACTTCGTGGTCGCCGGACAATCCATGTGGATAGCTGTAGCGG
GCTATCTGAGTAGCTTTCTTGGCGCCCTGCAGGTGCCGGTATTTCTACTG
GTTATGACCTATGTAACAGCATCTACGGCATATCATCTGCAAACCCTAGA
TGATTCGGGATCTTATCTTCACCGCCTGCAAAAGTTGTTCGACAAGAACG
ATTTTGAGCGATCGCTAAGCAACTTCAGCATTTGTGGCAGACCAGGCAAC
GAGCCACTGAGTCCGGGGCTGCAGTCGGATGTGGAGGATGTATCGTTAAG
TGACACTGTCGACTCGACGGACACGTTTGATGTCAAGCCAGAAACGGAGG
TTCCCAGTCACCAGAGCGACACATTCTTTAAGCTCCTTTTTTATGCCTGC
TTGGGCACATTCCTCTATCGCAACGTGTGGATGTTTATCCTAGCGGCAAT
CCCAGTAATTCTGCATCTTATTTACACCGTAGGAGAGTATACGGGAATTA
CTAAATTTGTTTGCAACAAAATTAGCGAAGTTTACGCAGCGCTGCGTTTC
TGGGCAATCGAACACCATTCTGCCGTGCTGCCACTCTGTCTACCTGGTGT
CCTGGAACTAAACTATAAAATCAACACTATCGTGCGGGATTCACTAAAGG
CCTCCGTTGAATCAGTCACCTCCATCCTAATGATCATCCTCATGCTGCTT
ATCATCGTGTTTCTAAGCGTGTTCTTCTGCGTGAACATTTACTCGGAGAC
GATTGAGGTGGCTTACCTGGGCAAGGATTTAATTAACAAGACGATCACAG
ATCGGCCTGAGCTAATTGACATCTTGCCTGCCAACATGCAATCGTCCATC
GAGGATGCTCTTGATAACGCACACCATTATGGTCGCCGTAAGATTGAAAC
CTACATAGACGACTGGCTGGCAGACGCCGATAAGGTGCACGCCACCAAGT
TGAAGGAGCAGATCCTCGAAGTGTGGGACCGGCTCATCCAGTATTGGATC
GATTTCAATAAGGCCGGTTCATCGTACGGGCCGCGGGTACCAACGGATGC
CCTGAAAAGCACATTTGGCGAAATCGTCGACAATCCAGAGCTAGTTTTAG
TGGCAAAACAGGGCATTATCGGCTGGGCGCAGAGCAATACGCAGACGATC
CTCGAGGTTGCAGAGTCGTTGTGGCACATCATCCGGACCAACATGTCCAT
GATAATGGGCGTGACCGGGGAGATTCTATCCCTTGTGCTTTCGGGTGGAC
AAGCGTGCATTGAGTTTATTCTAGATATGATTGTATTCTTTACGGCTCTG
TTCTACCTGCTCTCGAGCAGTCAGGAGAAGTACGCGCCCCTGCAGATCAC
AAAATACCTGGGCTATTCCAGCTCGGGTATCAAAATCGCCGATGCCCTGG
AAAACTCCATTACCGTAGTCCTAGTCTCAATGTTTAGGTGCTCCACCTTT
ACGGGTCTGTTCACCTGGTTAGTCCATACGGTTTTCGGGGCCCGGATTGT
GTTCCTGCCGTCCGCCTTGGCAGCTATGTTGGCTGCTGCTCCTTTCCTAG
GCAGTTACTGGTGTGCGGTGCCAGCCTTTCTAGAGCTTTGGCTGGCCCAG
GACCGCTTCTATGCAGGACTTATATTGTTCCTGCTTCAGTTTTTCGTGCC
ATCATCTTTTGAAACTGCTATATATGCGGACCTCAAAGGTGGACATCCCT
ACCTCAACGGCCTGGCCATAGCAGGCGGAATGTATTGGATCGGTTGGCAA
GGAGCTATTTTCGGACCCCTTATGCTTTGCTTCTTCATCGGCCTTTTTGA
GGTGGCCACGCTGGCCATGCGCAGTCATCAAGAGCCCAGGAACAGTACGG
ACGAGGAGCGGACCACGGCAAGCTTTCTAGACCAT

BO14067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RA 2454 CG2698-PA 1..2451 17..2467 12255 100 Plus
CG2698-RD 2610 CG2698-PD 1..2450 17..2466 12250 100 Plus
CG2698-RE 2466 CG2698-PE 1..2463 17..2467 12100 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:31:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RA 3150 CG2698-RA 262..2712 17..2467 12255 100 Plus
CG2698-RD 2988 CG2698-RD 262..2711 17..2466 12250 100 Plus
CG2698-RE 3162 CG2698-RE 262..2724 17..2467 12100 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8002553..8003159 541..1147 3035 100 Plus
3R 32079331 3R 8003220..8003760 1148..1688 2705 100 Plus
3R 32079331 3R 8001922..8002458 17..553 2640 99.4 Plus
3R 32079331 3R 8004237..8004647 1879..2289 2055 100 Plus
3R 32079331 3R 8003986..8004178 1687..1879 965 100 Plus
3R 32079331 3R 8004713..8004864 2289..2440 760 100 Plus
Blast to na_te.dros performed 2014-11-28 00:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 3311..3385 1194..1269 134 65.8 Plus

BO14067.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:37:31 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 240..2696 17..2475 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:26:23 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 262..2712 17..2469 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:02:35 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 240..2690 17..2469 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:33:29 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 262..2712 17..2469 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:33:29 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8001922..8002446 17..541 100 -> Plus
3R 8002554..8003159 542..1147 100 -> Plus
3R 8003220..8003760 1148..1688 100 -> Plus
3R 8003988..8004178 1689..1879 100 -> Plus
3R 8004238..8004647 1880..2289 100 -> Plus
3R 8004714..8004863 2290..2439 100 -> Plus
3R 8005254..8005281 2440..2469 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:26:23 Download gff for BO14067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3827644..3828168 17..541 100 -> Plus
arm_3R 3828276..3828881 542..1147 100 -> Plus
arm_3R 3828942..3829482 1148..1688 100 -> Plus
arm_3R 3829710..3829900 1689..1879 100 -> Plus
arm_3R 3829960..3830369 1880..2289 100 -> Plus
arm_3R 3830436..3830585 2290..2439 100 -> Plus
arm_3R 3830976..3831003 2440..2469 93   Plus

BO14067.pep Sequence

Translation from 16 to 2485

> BO14067.pep
MNRSEPIPIRRDRSFDSVINRLLRMRSQNHESFRAAMYNFLIAAGVAAFV
AVCFILGPFVRPLLWAFLMGAVLFPFKRRLAESVNSWFHRLEVRDSNVLV
SICLSPLEATEHCGRLLIGWLCEHWQLLLAGCGVAGCIKLLVLYAPKGFL
LAIWHWITFSHGLFVQIIGFLNVYVLISLIVVYLSCVHFFWRPENSAHFV
VAGQSMWIAVAGYLSSFLGALQVPVFLLVMTYVTASTAYHLQTLDDSGSY
LHRLQKLFDKNDFERSLSNFSICGRPGNEPLSPGLQSDVEDVSLSDTVDS
TDTFDVKPETEVPSHQSDTFFKLLFYACLGTFLYRNVWMFILAAIPVILH
LIYTVGEYTGITKFVCNKISEVYAALRFWAIEHHSAVLPLCLPGVLELNY
KINTIVRDSLKASVESVTSILMIILMLLIIVFLSVFFCVNIYSETIEVAY
LGKDLINKTITDRPELIDILPANMQSSIEDALDNAHHYGRRKIETYIDDW
LADADKVHATKLKEQILEVWDRLIQYWIDFNKAGSSYGPRVPTDALKSTF
GEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVT
GEILSLVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGY
SSSGIKIADALENSITVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSA
LAAMLAAAPFLGSYWCAVPAFLELWLAQDRFYAGLILFLLQFFVPSSFET
AIYADLKGGHPYLNGLAIAGGMYWIGWQGAIFGPLMLCFFIGLFEVATLA
MRSHQEPRNSTDEERTTASFLDH

BO14067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PD 869 CG2698-PD 1..818 1..818 4251 99.9 Plus
CG2698-PA 817 CG2698-PA 1..817 1..817 4250 100 Plus
CG2698-PE 821 CG2698-PE 1..821 1..817 4235 99.5 Plus
CG2698-PH 865 CG2698-PH 1..814 1..818 4219 99.4 Plus
CG2698-PG 813 CG2698-PG 1..813 1..817 4218 99.5 Plus