Clone BO14068 Report

Search the DGRC for BO14068

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG31098-RA
Protein status:BO14068.pep: Imported from assembly
Sequenced Size:1285

Clone Sequence Records

BO14068.3prime Sequence

688 bp (602 high quality bases) assembled on 2006-05-29

> BO14068.3prime
ATGGTCTAGAAAGCTTGCTTCATCCAAGAATCCAGATAGCTCGAATTCTT
TAATAGTTCGCTGAAGGAAAGCCCGATACTTGGGGTTTTCAACATTTTCC
CGGCGGAAACGATCACCGCTCTCAGTGCGTGAGTTCAGATCCTCAAGGTT
TTCGAAACCAGCTCCCTCCCTGAAGATCAGTGGAGTCAGGCAAGTGGCGC
CAATGACACCCATAAGACTGGTCTTGATCAACTCGATGTGGATTTCTTTA
AGAGTTGGAATGTGTCCCTGGTAGTTTAGCTTCTCCAGGGTCTGCTGAAG
CACTCTCTGGTATTCCCTCACAATGTACTTATAGTGGACCTTACGAACAT
TCTCGTTCAAGGATCCGTACAGGAAGTAATTGAGATCAATGGTTGGGGAT
CCCACATAGGCCAACTGAAAGTCCAATGTGACCACATCGTCTGGCTCCTT
GGTCTCGTTGTTGATGTGGAACAAGAGATTGTTGATCCACAGATCGGTGA
GGTTGAAGACCCGGAAATCCTTGCCTGTGCTCTCAAACATGGTCAGCGCT
CTTTGCAGGACATTCTCGGCCAGGTTGAACATCTTTCTCGGTGATCTCCT
CGTAGCCCTTCCAGTGAGCCACTTCCCTCGGCCACGCAGCGAATGTTGAC
GGGGAAAAAGGTGAGGAAAGTCACGACGGTCCGGATTC

BO14068.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-PA 1254 CG31098-RA 685..1251 585..19 2810 99.8 Minus
CG31098-PA 1254 CG31098-RA 645..686 626..585 210 100 Minus
CG31098-PA 1254 CG31098-RA 604..646 668..626 190 97.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-RA 1487 CG31098-RA 692..1358 688..19 3245 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25292028..25292286 427..688 1145 98.5 Plus
3R 32079331 3R 25291746..25291964 208..426 1080 99.5 Plus
3R 32079331 3R 25291499..25291695 19..215 970 99.5 Plus
Blast to na_te.dros performed on 2015-01-30 19:16:59 has no hits.

BO14068.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:14 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-PA 585..1254 18..688 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:18 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-PA 585..1254 18..688 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:07:43 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 692..1358 19..688 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:19:36 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 692..1358 19..688 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:19:36 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25291499..25291689 19..209 100 <- Plus
3R 25291748..25291964 210..426 99 <- Plus
3R 25292028..25292286 427..688 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:07:43 Download gff for BO14068.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21117221..21117411 19..209 100 <- Plus
arm_3R 21117470..21117686 210..426 99 <- Plus
arm_3R 21117750..21118008 427..688 98   Plus

BO14068.5prime Sequence

661 bp (618 high quality bases) assembled on 2006-05-29

> BO14068.5prime
GAAGTTATCAGTCGACATGGGAACCGGCAGCAAGAACTACCAGGCTCCGG
AATGGCTCACCGCCGAATTCCTGCAGGATGTGCTGAAGGAACACTTCAAG
GAAGAGCAGCTGGCAGTCACCGAGTTGATAGTAAAGAGCGCCCAAGTGGG
CGACCAGGCGGCGGGATTTGCCAGCGAAATGCATCGGGCCAGTTTCAATC
TTCAGAGGGGCACTGCACCCAAAGGCAAGTTTTCAGTGATTGTGAAGGAT
CATCCCAAGGGACAAACAGGTGCTGTGGCCCACAGGAGTAAGCTCTTCAA
GCGTGAGATTCTGGCTTACAAGGAGGTGCTTCCACGTATTCAAGCCTTGC
TCCAATCCATTGGAGATCAAACGAAAATTGCACCTACGTGCTACTACACC
ACGGAATCGCCGGAGCCATTCCTGATTCTGGAGGACATGCAGCTGTCCGG
CTTCGAGAACTTCGAACGCGGTCGACTGCTGAATCTGGACTACGTACTGC
CCACCATCGAGAAGGTCGCCAAGCTGCACGCTTGCAGCGCCCTTATCGCC
CAGGATAGCCCCGAGGTGCTGGAGTTCTTCGACGAGGCGCCCATTTCGAG
GAATCCGGACCGTCGTGACTTCCTCACCTTCTTCCCCGTCAACATTCGCT
GCGTGGCCGAG

BO14068.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-PA 1254 CG31098-RA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-RA 1487 CG31098-RA 108..752 17..661 3225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25292226..25292870 661..17 3225 100 Minus
Blast to na_te.dros performed on 2015-02-09 23:08:33 has no hits.

BO14068.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:15 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-PA 1..645 17..661 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:19 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-PA 1..645 17..661 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:25:48 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 108..752 17..661 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:52:14 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 108..752 17..661 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:52:14 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25292226..25292870 17..661 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:25:48 Download gff for BO14068.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21117948..21118592 17..661 100   Minus

BO14068.complete Sequence

1285 bp assembled on 2008-11-10

GenBank Submission: KX797505

> BO14068.complete
GAAGTTATCAGTCGACATGGGAACCGGCAGCAAGAACTACCAGGCTCCGG
AATGGCTCACCGCCGAATTCCTGCAGGATGTGCTGAAGGAACACTTCAAG
GAAGAGCAGCTGGCAGTCACCGAGTTGATAGTAAAGAGCGCCCAAGTGGG
CGACCAGGCGGCGGGATTTGCCAGCGAAATGCATCGGGCCAGTTTCAATC
TTCAGAGGGGCACTGCACCCAAAGGCAAGTTTTCAGTGATTGTGAAGGAT
CATCCCAAGGGACAAACAGGTGCTGTGGCCCACAGGAGTAAGCTCTTCAA
GCGTGAGATTCTGGCTTACAAGGAGGTGCTTCCACGTATTCAAGCCTTGC
TCCAATCCATTGGAGATCAAACGAAAATTGCACCTACGTGCTACTACACC
ACGGAATCGCCGGAGCCATTCCTGATTCTGGAGGACATGCAGCTGTCCGG
CTTCGAGAACTTCGAACGCGGTCGACTGCTGAATCTGGACTACGTACTGC
CCACCATCGAGAAGGTCGCCAAGCTGCACGCTTGCAGCGCCCTTATCGCC
CAGGATAGCCCCGAGGTGCTGGAGTTCTTCGACGAGGCGCCCATTTCGAG
GAATCCGGACCGTCGTGACTTCCTCACCTTCTTCCCCGTCAACATTCGCT
GCGTGGCCGAGGAAGTGGCTCACTGGAAGGGCTACGAGGAGATCACCGAG
AAGATGTTCAACCTGGCCGAGAATGTCCTGCAAAGAGCGCTGACCATGTT
TGAGAGCACAGGCAAGGATTTCCGGGTCTTCAACCTCACCGATCTGTGGA
TCAACAATCTCTTGTTCCACATCAACAACGAGACCAAGGAGCCAGACGAT
GTGGTCACATTGGACTTTCAGTTGGCCTATGTGGGATCCCCAACCATTGA
TCTCAATTACTTCCTCTACGGATCCTTGAACGAGAATGTTCGTAAGGTCC
ACTATAAGTACATTGTGAGGGAATACCAGAGAGTGCTTCAGCAGACCCTG
GAGAAGCTAAACTACCAGGGACACATTCCAACTCTTAAAGAAATCCACAT
CGAGTTGATCAAGACCAGTCTTATGGGTGTCATTGGCGCCACTTGCCTGA
CTCCACTGATCTTCAGGGAGGGAGCTGGTTTCGAAAACCTTGAGGATCTG
AACTCACGCACTGAGAGCGGTGATCGTTTCCGCCGGGAAAATGTTGAAAA
CCCCAAGTATCGGGCTTTCCTTCAGCGAACTATTAAAGAATTCGAGCTAT
CTGGATTCTTGGATGAAGCAAGCTTTCTAGACCAT

BO14068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-RA 1254 CG31098-PA 1..1251 17..1267 6255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-RA 1487 CG31098-RA 108..1358 17..1267 6255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25292028..25292870 859..17 4215 100 Minus
3R 32079331 3R 25291746..25291964 1078..860 1095 100 Minus
3R 32079331 3R 25291499..25291695 1267..1071 970 99.5 Minus
Blast to na_te.dros performed on 2014-11-27 16:35:18 has no hits.

BO14068.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:15:54 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 102..1352 17..1267 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:16 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 108..1358 17..1269 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:08 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 102..1352 17..1269 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:59 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
CG31098-RA 108..1358 17..1269 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:59 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25291748..25291964 860..1076 100 <- Minus
3R 25291497..25291689 1077..1269 98 <- Minus
3R 25292028..25292870 17..859 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:16 Download gff for BO14068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21117219..21117411 1077..1269 98 <- Minus
arm_3R 21117470..21117686 860..1076 100 <- Minus
arm_3R 21117750..21118592 17..859 100   Minus

BO14068.pep Sequence

Translation from 16 to 1285

> BO14068.pep
MGTGSKNYQAPEWLTAEFLQDVLKEHFKEEQLAVTELIVKSAQVGDQAAG
FASEMHRASFNLQRGTAPKGKFSVIVKDHPKGQTGAVAHRSKLFKREILA
YKEVLPRIQALLQSIGDQTKIAPTCYYTTESPEPFLILEDMQLSGFENFE
RGRLLNLDYVLPTIEKVAKLHACSALIAQDSPEVLEFFDEAPISRNPDRR
DFLTFFPVNIRCVAEEVAHWKGYEEITEKMFNLAENVLQRALTMFESTGK
DFRVFNLTDLWINNLLFHINNETKEPDDVVTLDFQLAYVGSPTIDLNYFL
YGSLNENVRKVHYKYIVREYQRVLQQTLEKLNYQGHIPTLKEIHIELIKT
SLMGVIGATCLTPLIFREGAGFENLEDLNSRTESGDRFRRENVENPKYRA
FLQRTIKEFELSGFLDEASFLDH

BO14068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31098-PA 417 CG31098-PA 1..417 1..417 2159 100 Plus
CG11892-PA 439 CG11892-PA 33..436 10..416 442 30.2 Plus
CG11892-PB 439 CG11892-PB 33..436 10..416 442 30.2 Plus
CG10514-PA 413 CG10514-PA 4..408 10..416 426 28 Plus
CG13360-PA 421 CG13360-PA 12..421 8..416 389 24.3 Plus