Clone BO14072 Report

Search the DGRC for BO14072

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG9297-RB
Protein status:BO14072.pep: Imported from assembly
Sequenced Size:2890

Clone Sequence Records

BO14072.complete Sequence

2890 bp assembled on 2010-04-13

GenBank Submission: KX795777

> BO14072.complete
GAAGTTATCATTCGACATGGGGCGGCTAACCATTTGGTTCCTACTGGGAC
TAACGTTAATCGCCGTTTCCAATAATGTTGGGTTTGTCAATGCCGATGTC
GGACCAAGCGAATCAGAATGTCGACCCTACATTGAAAAGGCTATTCATGA
ATTGAAAACAGATGGTGTCAGGGATGGATCTGGAGAACTGCAATCCGATC
AGCCACGTGGGGACGACGACGATGACGACGATGATGGTGGGCATTCTGCG
GTTGATGAGAAAGATACGATTGAAATTGAAACTGTCGAATTGGATTCCAC
AGAGGACGCGAAAAGTGCCAACGATTTGGATGGAGATGGAATACCCGATG
ACGAGGACGATGATATCGATGGGGACGGCATTCCGAACGAAAAGGACGAT
GATATCGATGGAGATGGCATACCGAACGACGAGGATGATGACATCGATGG
CGATGGCATCCCGAATGAAGATGACGACGATATTGATGGGGATGGTGTGC
CCAACTCCAAGGACGAGGACATCGATGGGGATGGTGTGCCCAACTCCAAG
GACGAAGACATCGATGGCGATGGCAAGGCAAATCACGAGGATGATGATCT
AGATGGTGATGGCACTCCAAATCATGAGGACGAAGATCTCGACGGGGACG
GTGTGCCCAACGAGGAAGATGATGACCTCGATGGTGATGGCAAAATAAAT
CACGAGGATGAAGACCTCGATGGTGATGGAGTGAAAAATGACGAAGACGA
GGATCTGGATGGAGATGGCAAAGTAAATCACGAGGACGAAGATCTTGATG
GAGATGGCGTGAAGAATGAAAAGGACGACGATTTGGATGGCGATGGTACC
AACAATTCTCAGGATGAAGACCTAGATGGTGATGGTGTGCCAAATGAAAA
GGATGACGATCTGGATGGAGATGGCATCCTGAACGAGCACGACGGTGATG
TGGATGGCGATGGAGTTCCCAATGAACACGATCACAAGGATAGCGGTGAG
AATGCCGATGATGATGATGACGACGATGATGAGGATGACAAGGAGGCGGT
CAAGAAGCGAAGCAAACGTGAAGTGGATGCTGCTCCTGTTCTGGACATTG
AGGCTCCACCAAGTCCCGCCGAAGAATTTCCCGTAGAGGAAGAAATCGTC
AAGGAGGCATCTGCCGAAGAGGAAGCCGAAGTTGAGGCTGTGAAAGAAGA
GGAGCCCGAGCAGGAAGCTGTTCAGGAACCCGAACCGGAACCGGTAGTGG
AACCAGAAGCGGAAGTGCAACCCGAACCAGTCCAGCAGGAAGAAGAGAAG
GCCGAATCTGCGGAAGCGAAGGAGGAGGAAAAGCCAGCACCAGTTGAGGA
GGCTGAGGCTGAGGAGGAATCTGTGCAGCCTGAAGCCGCTCCCAAAGAAC
CCGAAGCTGTCCAGGAGGAAGCACAGGAAGATGAACCACAAACCGATGGC
GCACAAGATGCCGCTGATGATGATGATGACACCAAGCCAGAGGATGAGCT
TCTTTGGGAAGGACACATTCCCGAGAACCGACGCAGTCGCCAGCACATCA
CCGAACTGCTCCAGTTGGATGAGGAGTTCAATGCCCGTGAGAAGGCTACC
GACAACGTTGCTGAGATCATCCTGCGGGACATTAAGCGCATCTACGAGAA
TGCTGTCAAGCCCCTGGAGACCCTGTACAAATATCGCGATCTGAGCAACC
GCCACTTCAGCGATCCCGAGATCTTCTCAAAGCCACTGATTCTATTCATG
GGTCCTTGGTCCGGCGGCAAGTCGTCCATTCTTAACTATCTGACCGACAA
TGAGTACACGCCGAACTCTTTGAGAACTGGTGCTGAACCCTCTCCGGCCT
ACTTCAACATTCTGATGTGGGGCAATGAGACGGAGGTTCTGGACGGCACT
CAACTGGCGGCGGACTACACCTTTGCCGGCCTCCAGAAGTTCGGTCAGGG
ATTGGAGGAGCGCCTGCGTGGTCTGAAGATGAAGAGCAAGATCCTCGAAA
AGGTCAACATCGTCGAGATACCCGGCATTCTAGAGGTGCGCAAGCAAGTG
TCCCGCGTCTTCCCCTTCAACGACGCCTGCCAGTGGTTCATCGATCGGGC
GGACATCATCTTCTTGGTCTACGACCCGGCCAAGTTGGATGTGGGCCCCG
AGACGGAGGCCATTCTCGACCAGCTGAAGGGGCGCGAGTACCAGACGCGC
ATCATCCTCAACAAGGCAGACACCGTCAAGCCCGAGGAGTTGTTGCGCGT
CCAGGGCGCCCTCATCTGGAACATCTCGCCATTGATGTCCTCCGCCCAGC
CGCCGCTGATGTACACCACCTCGCTGTGGACCCATCCCTACCAGGATGGT
GCTCCCGCCCGCCTGCTGCTCGCCCAGGAGCGCGCCTTCTTGCGCGACCT
GCGCACAGCCATCGACAAGCGCATCGAGCACAAGATCGCCAGCGCACGTC
GTTTTGCGGTGCGTGTGCGCAACCACGCCAAGATGGTGGACTGCTACCTG
AACACGTTCAACAACCACAAGACGCTGTTTGGCAACAAGAAGCGCATCGC
CGATGACATCATCGATCATCCGCAGAACTACCACATCTACGAGGGACTCT
CCACACTGACGAACATCTCGCGCTACGATCTTCCGGATCCGGAAGTCTAC
CGCGACTTCTTCCGCCTGAATCCGCTGTACGAGTTCAAGAAGCTGAGGGA
CACCTGCACCTACTTCCGCGGCTGTCCGATCACCAAACTGGACCTGGCCA
TTGCCTACGAACTGCCCGAATTGGCCGGCAAGTACAAGAAGATGTCCGAG
GCTGCGTTGGCCGCCATTGAGGCCCAACAGCAGGATGGAACCATAGGCCA
GGCCGAGCCTAAGAGGACGAGTGCAAGCTTTCTAGACCAT

BO14072.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG9297-RE 2859 CG9297-PE 1..2856 17..2872 14280 100 Plus
CG9297-RD 2859 CG9297-PD 1..2856 17..2872 14280 100 Plus
CG9297-RC 2859 CG9297-PC 1..2856 17..2872 14280 100 Plus
CG9297-RE 2859 CG9297-PE 313..830 407..924 565 73.9 Plus
CG9297-RE 2859 CG9297-PE 391..908 329..846 565 73.9 Plus
CG9297-RD 2859 CG9297-PD 313..830 407..924 565 73.9 Plus
CG9297-RD 2859 CG9297-PD 391..908 329..846 565 73.9 Plus
CG9297-RE 2859 CG9297-PE 338..753 393..808 490 74.5 Plus
CG9297-RE 2859 CG9297-PE 377..792 354..769 490 74.5 Plus
CG9297-RD 2859 CG9297-PD 338..753 393..808 490 74.5 Plus
CG9297-RD 2859 CG9297-PD 377..792 354..769 490 74.5 Plus
CG9297-RE 2859 CG9297-PE 338..754 510..926 450 73.9 Plus
CG9297-RE 2859 CG9297-PE 494..910 354..770 450 73.9 Plus
CG9297-RD 2859 CG9297-PD 338..754 510..926 450 73.9 Plus
CG9297-RD 2859 CG9297-PD 494..910 354..770 450 73.9 Plus
CG9297-RE 2859 CG9297-PE 313..596 446..729 355 75 Plus
CG9297-RE 2859 CG9297-PE 430..713 329..612 355 75 Plus
CG9297-RD 2859 CG9297-PD 313..596 446..729 355 75 Plus
CG9297-RD 2859 CG9297-PD 430..713 329..612 355 75 Plus
CG9297-RE 2859 CG9297-PE 379..559 746..926 185 73.5 Plus
CG9297-RE 2859 CG9297-PE 730..910 395..575 185 73.5 Plus
CG9297-RD 2859 CG9297-PD 379..559 746..926 185 73.5 Plus
CG9297-RD 2859 CG9297-PD 730..910 395..575 185 73.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG9297-RE 4134 CG9297-RE 285..3140 17..2872 14280 100 Plus
CG9297-RD 4127 CG9297-RD 278..3133 17..2872 14280 100 Plus
CG9297-RC 4111 CG9297-RC 262..3117 17..2872 14280 100 Plus
CG9297-RE 4134 CG9297-RE 597..1114 407..924 565 73.9 Plus
CG9297-RE 4134 CG9297-RE 675..1192 329..846 565 73.9 Plus
CG9297-RD 4127 CG9297-RD 590..1107 407..924 565 73.9 Plus
CG9297-RD 4127 CG9297-RD 668..1185 329..846 565 73.9 Plus
CG9297-RE 4134 CG9297-RE 622..1037 393..808 490 74.5 Plus
CG9297-RE 4134 CG9297-RE 661..1076 354..769 490 74.5 Plus
CG9297-RD 4127 CG9297-RD 615..1030 393..808 490 74.5 Plus
CG9297-RD 4127 CG9297-RD 654..1069 354..769 490 74.5 Plus
CG9297-RE 4134 CG9297-RE 622..1038 510..926 450 73.9 Plus
CG9297-RE 4134 CG9297-RE 778..1194 354..770 450 73.9 Plus
CG9297-RD 4127 CG9297-RD 615..1031 510..926 450 73.9 Plus
CG9297-RD 4127 CG9297-RD 771..1187 354..770 450 73.9 Plus
CG9297-RE 4134 CG9297-RE 597..880 446..729 355 75 Plus
CG9297-RE 4134 CG9297-RE 714..997 329..612 355 75 Plus
CG9297-RD 4127 CG9297-RD 590..873 446..729 355 75 Plus
CG9297-RD 4127 CG9297-RD 707..990 329..612 355 75 Plus
CG9297-RE 4134 CG9297-RE 663..843 746..926 185 73.5 Plus
CG9297-RE 4134 CG9297-RE 1014..1194 395..575 185 73.5 Plus
CG9297-RD 4127 CG9297-RD 656..836 746..926 185 73.5 Plus
CG9297-RD 4127 CG9297-RD 1007..1187 395..575 185 73.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13775530..13776177 861..1508 3240 100 Plus
3R 32079331 3R 13777251..13777711 2001..2461 2305 100 Plus
3R 32079331 3R 13774309..13774737 159..587 2145 100 Plus
3R 32079331 3R 13777909..13778323 2458..2872 2075 100 Plus
3R 32079331 3R 13776230..13776558 1503..1831 1630 99.7 Plus
3R 32079331 3R 13776787..13776966 1825..2004 885 99.4 Plus
3R 32079331 3R 13773934..13774018 77..161 425 100 Plus
3R 32079331 3R 13774504..13774684 393..573 425 82.3 Plus
3R 32079331 3R 13774543..13774723 354..534 425 82.3 Plus
3R 32079331 3R 13775091..13775169 626..704 395 100 Plus
3R 32079331 3R 13775227..13775305 704..782 395 100 Plus
3R 32079331 3R 13775381..13775459 782..860 395 100 Plus
3R 32079331 3R 13772350..13772410 17..77 305 100 Plus
3R 32079331 3R 13774479..13774737 446..704 275 73.7 Plus
3R 32079331 3R 13774479..13774606 407..534 265 80.5 Plus
3R 32079331 3R 13774557..13774684 329..456 265 80.5 Plus
3R 32079331 3R 13774504..13774684 510..690 260 76.2 Plus
3R 32079331 3R 13774596..13774725 329..458 215 77.7 Plus
3R 32079331 3R 13774798..13774837 587..626 200 100 Plus
3R 32079331 3R 13775529..13775595 704..770 200 86.6 Plus
3R 32079331 3R 13775228..13775293 861..926 195 86.4 Plus
3R 32079331 3R 13774503..13774645 626..768 190 75.5 Plus
3R 32079331 3R 13774545..13774725 746..926 185 73.5 Plus
Blast to na_te.dros performed on 2014-11-27 08:35:15 has no hits.

BO14072.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:25:58 Download gff for BO14072.complete
Subject Subject Range Query Range Percent Splice Strand
CG9297-RB 231..3086 17..2874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:25 Download gff for BO14072.complete
Subject Subject Range Query Range Percent Splice Strand
CG9297-RC 262..3117 17..2874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:22:40 Download gff for BO14072.complete
Subject Subject Range Query Range Percent Splice Strand
CG9297-RC 262..3117 17..2874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:22:40 Download gff for BO14072.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13772350..13772410 17..77 100 -> Plus
3R 13773935..13774018 78..161 100 -> Plus
3R 13774312..13774737 162..587 100 -> Plus
3R 13774799..13774837 588..626 100 -> Plus
3R 13775092..13775169 627..704 100 -> Plus
3R 13775228..13775305 705..782 100 -> Plus
3R 13775382..13775459 783..860 100 -> Plus
3R 13775530..13776176 861..1507 100 -> Plus
3R 13776235..13776556 1508..1829 100 -> Plus
3R 13776792..13776964 1830..2002 100 -> Plus
3R 13777253..13777708 2003..2458 100 -> Plus
3R 13777910..13778323 2459..2874 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:25 Download gff for BO14072.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9598072..9598132 17..77 100 -> Plus
arm_3R 9599657..9599740 78..161 100 -> Plus
arm_3R 9600034..9600459 162..587 100 -> Plus
arm_3R 9600521..9600559 588..626 100 -> Plus
arm_3R 9600814..9600891 627..704 100 -> Plus
arm_3R 9600950..9601027 705..782 100 -> Plus
arm_3R 9601104..9601181 783..860 100 -> Plus
arm_3R 9601252..9601898 861..1507 100 -> Plus
arm_3R 9601957..9602278 1508..1829 100 -> Plus
arm_3R 9602514..9602686 1830..2002 100 -> Plus
arm_3R 9602975..9603430 2003..2458 100 -> Plus
arm_3R 9603632..9604045 2459..2874 99   Plus

BO14072.3prime Sequence

715 bp (616 high quality bases) assembled on 2006-05-29

> BO14072.3prime
ATGGTCTAGAAAGCTTGCACTCGTCCTCTTAGGCTCGGCCTGGCCTATGG
TTCCATCCTGCTGTTGGGCCTCAATGGCGGCCAACGCAGCCTCGGACATC
TTCTTGTACTTGCCGGCCAATTCGGGCAGTTCGTAGGCAATGGCCAGGTC
CAGTTTGGTGATCGGACAGCCGCGGAAGTAGGTGCAGGTGTCCCTCAGCT
TCTTGAACTCGTACAGCGGATTCAGGCGGAAGAAGTCGCGGTAGACTTCC
GGATCCGGAAGATCGTAGCGCGAGATGTTCGTCAGTGTGGAGAGTCCCTC
GTAGATGTGGTAGTTCTGCGGATGATCGATGATGTCATCGGCGATGCGCT
TCTTGTTGCCAAACAGCGTCTTGTGGTTGTTGAACGTGTTCAGGTAGCAG
TCCACCATCTTGGCGTGGTTGCGCACACGCACCGCAAAACGACGTGCGCT
GGCGATCTTGTGCTCGATGCGCTTGTCGATGGCTGTGCGCAGGTCGCGCA
AGAAGGCGCGCTCCTGGGCGAGCAGCAGGCGGGCGGGAGCACCATCCTGG
TAGGGATGGGTCCACAGCGAGGTGGTGTACATCAGCGGCGGCTGGGCGGA
GGACATCAATGGCGAGATGTTCCAGATGAGGGCGCCCTGGACGCGCAAAC
ACTCCTCGGGCTTGACGGTGTCTGCCTTGTTGAGGATGAATGCCGTCTGG
TACTCGCGCCCCTTC

BO14072.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG9297-PB 2859 CG9297-RB 2186..2856 689..19 3305 99.7 Minus
CG9297-PA 2793 CG9297-RA 2120..2790 689..19 3305 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9297-RE 4134 CG9297-RE 2444..3140 715..19 3410 99.4 Minus
CG9297-RD 4127 CG9297-RD 2437..3133 715..19 3410 99.4 Minus
CG9297-RC 4111 CG9297-RC 2421..3117 715..19 3410 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13777909..13778323 433..19 2075 100 Minus
3R 32079331 3R 13777426..13777711 715..430 1340 97.9 Minus
Blast to na_te.dros performed on 2015-01-30 19:16:49 has no hits.

BO14072.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:23 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9297-PA 2094..2793 16..715 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:29 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9297-PA 2094..2793 16..715 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:07:40 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9297-RC 2421..3117 19..715 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:19:34 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9297-RC 2421..3117 19..715 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:19:34 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 13777426..13777708 433..715 98 -> Minus
3R 13777910..13778323 19..432 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:07:40 Download gff for BO14072.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9603148..9603430 433..715 98 -> Minus
arm_3R 9603632..9604045 19..432 100   Minus

BO14072.pep Sequence

Translation from 16 to 2890

> BO14072.pep
MGRLTIWFLLGLTLIAVSNNVGFVNADVGPSESECRPYIEKAIHELKTDG
VRDGSGELQSDQPRGDDDDDDDDGGHSAVDEKDTIEIETVELDSTEDAKS
ANDLDGDGIPDDEDDDIDGDGIPNEKDDDIDGDGIPNDEDDDIDGDGIPN
EDDDDIDGDGVPNSKDEDIDGDGVPNSKDEDIDGDGKANHEDDDLDGDGT
PNHEDEDLDGDGVPNEEDDDLDGDGKINHEDEDLDGDGVKNDEDEDLDGD
GKVNHEDEDLDGDGVKNEKDDDLDGDGTNNSQDEDLDGDGVPNEKDDDLD
GDGILNEHDGDVDGDGVPNEHDHKDSGENADDDDDDDDEDDKEAVKKRSK
REVDAAPVLDIEAPPSPAEEFPVEEEIVKEASAEEEAEVEAVKEEEPEQE
AVQEPEPEPVVEPEAEVQPEPVQQEEEKAESAEAKEEEKPAPVEEAEAEE
ESVQPEAAPKEPEAVQEEAQEDEPQTDGAQDAADDDDDTKPEDELLWEGH
IPENRRSRQHITELLQLDEEFNAREKATDNVAEIILRDIKRIYENAVKPL
ETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSILNYLTDNEYTPN
SLRTGAEPSPAYFNILMWGNETEVLDGTQLAADYTFAGLQKFGQGLEERL
RGLKMKSKILEKVNIVEIPGILEVRKQVSRVFPFNDACQWFIDRADIIFL
VYDPAKLDVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALI
WNISPLMSSAQPPLMYTTSLWTHPYQDGAPARLLLAQERAFLRDLRTAID
KRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTLFGNKKRIADDIID
HPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKKLRDTCTYF
RGCPITKLDLAIAYELPELAGKYKKMSEAALAAIEAQQQDGTIGQAEPKR
TSASFLDH

BO14072.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9297-PE 952 CG9297-PE 1..952 1..952 5037 100 Plus
CG9297-PD 952 CG9297-PD 1..952 1..952 5037 100 Plus
CG9297-PC 952 CG9297-PC 1..952 1..952 5037 100 Plus
CG9297-PB 952 CG9297-PB 1..952 1..952 5037 100 Plus
CG9297-PA 930 CG9297-PA 1..930 1..952 4894 97.7 Plus