Clone BO14086 Report

Search the DGRC for BO14086

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG11905-RC
Protein status:BO14086.pep: validated full length
Sequenced Size:979

Clone Sequence Records

BO14086.3prime Sequence

787 bp (687 high quality bases) assembled on 2006-05-29

> BO14086.3prime
ATGGTCTAGAAAGCTTGCCGTGAACAGATCCAATTCCAAATCCGCCGTAG
CATGCGCCTTGCCACCCACACCTGCTATGGCCACAGATTCCGGATTGAAG
TAAACGTTGGTGGGTACACCCTTCTTCAGATACGCCTTGGAAATGGGCGT
GGATATGGCAGTGCCACCATTACCAACCACCGCTTTGGAATGAGGTTCCA
GGATGAGTGCAGCCTGCTTGCGTCCCTGGATCGCCTGAGCCTGCTCCGGT
CTATAGGGCAGGAAGTAGTTTCCAAATGGGATCTGCGGAAAGTTGCCGGA
ACTCGTGCTGGTCTTTCCGGTGGCCTCAACCTTCAAGGGAACTCTTCCAC
CCGCCTGCTTTCTCATTTTTTGTGGGGCAATCGCCTTCTTCAACTGCTGC
TTGGCGGAGCGGGGTGACCCAGAAGTGGAGATCACTAGCTTGCCCGGCAC
CGGAACGATCTCTTCGATCACATACTCGGGGTTTATTTTGCTGACCGCTG
AGCGGAGACCCACATCACTCTTCAGATCCCCAGTGGTTCGGGTCTTCACT
GCAGGCAGAGCCTGTAGCTTTTCTGGTTTCTCCAACTCGCTGGAGCTGTC
ATCAGCTAAGCTTTCGGGTCGGCCAGTTGTGGTAGTGGTCGTTGTGGTTG
TTGCACTGGCTATGGTGGCTTGATCGGCACTGGCGATGGTGGGTTGCACC
ACATAGGCCAGGGGCAGATTGTAGGCGGCGTAGTATGGGGCACTGAACAG
CACGGGTTGATAGGCTCCATAGGGCGTGAGGTCCTGG

BO14086.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-PC 948 CG11905-RC 177..945 787..19 3845 100 Minus
CG11905-PE 948 CG11905-RE 177..945 787..19 3845 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-RH 1480 CG11905-RH 446..1214 787..19 3845 100 Minus
CG11905-RE 1539 CG11905-RE 505..1273 787..19 3845 100 Minus
CG11905-RC 1357 CG11905-RC 323..1091 787..19 3845 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16930120..16930888 19..787 3845 100 Plus
Blast to na_te.dros performed on 2015-02-12 12:08:10 has no hits.

BO14086.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:44 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-PE 177..948 15..787 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:56 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-PE 177..948 15..787 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:11:19 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 323..1096 14..787 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:04:20 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 323..1096 14..787 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:04:20 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 16930115..16930888 14..787 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:11:19 Download gff for BO14086.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16923215..16923988 14..787 99   Plus

BO14086.5prime Sequence

713 bp (670 high quality bases) assembled on 2006-05-29

> BO14086.5prime
GAAGTTATCAGTCGACATGCGCTTTCTTGTTCTCTCAACACTGCTTCTGG
CCTCTTTGGCACTTGGCCAGGCTCAACAGCACGGTGGACTGGCCGTCGAT
GCCTACTGGCGCACAACCAATATCGAGGCCTGGCCACCAGGAGCACCCGT
CGCAGAGAAGTCCGGAAAACTCATTGCAGGATCTGCTCCGGCCCAGGACC
TCACGCCCTATGGAGCCTATCAACCCGTGCTGTTCAGTGCCCCATACTAC
GCCGCCTACAATCTGCCCCTGGCCTATGTGGTGCAACCCACCATCGCCAG
TGCCGATCAAGCCACCATAGCCAGTGCAACAACCACAACGACCACTACCA
CAACTGGCCGACCCGAAAGCTTAGCTGATGACAGCTCCAGCGAGTTGGAG
AAACCAGAAAAGCTACAGGCTCTGCCTGCAGTGAAGACCCGAACCACTGG
GGATCTGAAGAGTGATGTGGGTCTCCGCTCAGCGGTCAGCAAAATAAACC
CCGAGTATGTGATCGAAGAGATCGTTCCGGTGCCGGGCAAGCTAGTGATC
TCCACTTCTGGGTCACCCCGCTCCGCCAAGCAGCAGTTGAAGAAGGCGAT
TGCCCCACAAAAAATGAGAAAGCAGGCGGGTGGAAGAGTTCCCTTGAAGG
TTGAGGCCACCGGAAAGACCAGCACGAGTTCCGGCAACTTTCCCCAAATC
CCATTTGGAAACC

BO14086.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-PC 948 CG11905-RC 1..696 17..712 3430 99.7 Plus
CG11905-PE 948 CG11905-RE 1..696 17..712 3430 99.7 Plus
CG11905-PB 1212 CG11905-RB 1..83 17..99 415 100 Plus
CG11905-PF 1212 CG11905-RF 1..83 17..99 415 100 Plus
CG11905-PA 1824 CG11905-RA 1..83 17..99 415 100 Plus
CG11905-PG 1824 CG11905-RG 1..83 17..99 415 100 Plus
CG11905-PD 1824 CG11905-RD 1..83 17..99 415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-RH 1480 CG11905-RH 270..965 17..712 3450 99.7 Plus
CG11905-RE 1539 CG11905-RE 329..1024 17..712 3450 99.7 Plus
CG11905-RC 1357 CG11905-RC 147..842 17..712 3450 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16930369..16930981 712..100 3035 99.7 Minus
3L 28110227 3L 16933293..16933360 99..32 340 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:35:00 has no hits.

BO14086.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:45 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-PE 1..696 17..713 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:58 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-PE 1..696 17..713 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:47:39 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 141..842 11..713 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:11:20 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 141..842 11..713 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:11:20 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16930368..16930981 100..713 99 <- Minus
3L 16933293..16933360 32..99 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:47:39 Download gff for BO14086.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16923468..16924081 100..713 99 <- Minus
arm_3L 16926393..16926460 32..99 100 <- Minus

BO14086.complete Sequence

979 bp assembled on 2006-10-11

GenBank Submission: FJ633021

> BO14086.complete
GAAGTTATCAGTCGACATGCGCTTTCTTGTTCTCTCAACACTGCTTCTGG
CCTCTTTGGCACTTGGCCAGGCTCAACAGCACGGTGGACTGGCCGTCGAT
GCCTACTGGCGCACAACCAATATCGAGGCCTGGCCACCAGGAGCACCCGT
CGCAGAGAAGTCCGGAAAACTCATTGCAGGATCTGCTCCGGCCCAGGACC
TCACGCCCTATGGAGCCTATCAACCCGTGCTGTTCAGTGCCCCATACTAC
GCCGCCTACAATCTGCCCCTGGCCTATGTGGTGCAACCCACCATCGCCAG
TGCCGATCAAGCCACCATAGCCAGTGCAACAACCACAACGACCACTACCA
CAACTGGCCGACCCGAAAGCTTAGCTGATGACAGCTCCAGCGAGTTGGAG
AAACCAGAAAAGCTACAGGCTCTGCCTGCAGTGAAGACCCGAACCACTGG
GGATCTGAAGAGTGATGTGGGTCTCCGCTCAGCGGTCAGCAAAATAAACC
CCGAGTATGTGATCGAAGAGATCGTTCCGGTGCCGGGCAAGCTAGTGATC
TCCACTTCTGGGTCACCCCGCTCCGCCAAGCAGCAGTTGAAGAAGGCGAT
TGCCCCACAAAAAATGAGAAAGCAGGCGGGTGGAAGAGTTCCCTTGAAGG
TTGAGGCCACCGGAAAGACCAGCACGAGTTCCGGCAACTTTCCGCAGATC
CCATTTGGAAACTACTTCCTGCCCTATAGACCGGAGCAGGCTCAGGCGAT
CCAGGGACGCAAGCAGGCTGCACTCATCCTGGAACCTCATTCCAAAGCGG
TGGTTGGTAATGGTGGCACTGCCATATCCACGCCCATTTCCAAGGCGTAT
CTGAAGAAGGGTGTACCCACCAACGTTTACTTCAATCCGGAATCTGTGGC
CATAGCAGGTGTGGGTGGCAAGGCGCATGCTACGGCGGATTTGGAATTGG
ATCTGTTCACGGCAAGCTTTCTAGACCAT

BO14086.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-RH 948 CG11905-PH 1..945 17..961 4725 100 Plus
CG11905-RE 948 CG11905-PE 1..945 17..961 4725 100 Plus
CG11905-RC 948 CG11905-PC 1..945 17..961 4725 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:37:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-RH 1480 CG11905-RH 270..1214 17..961 4725 100 Plus
CG11905-RE 1539 CG11905-RE 329..1273 17..961 4725 100 Plus
CG11905-RC 1357 CG11905-RC 147..1091 17..961 4725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16930120..16930981 961..100 4310 100 Minus
3L 28110227 3L 16933293..16933360 99..32 340 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:37:29 has no hits.

BO14086.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:22:45 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
CG11905-RH 1..948 17..965 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:56:40 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
CG11905-RH 260..1215 11..966 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:06 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 147..1091 17..963 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:22:46 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
CG11905-RH 260..1215 11..966 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:49:19 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
CG11905-RC 147..1091 17..963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:49:19 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16930118..16930981 100..963 99 <- Minus
3L 16933293..16933360 32..99 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:06 Download gff for BO14086.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16923218..16924081 100..963 99 <- Minus
arm_3L 16926393..16926460 32..99 100 <- Minus

BO14086.pep Sequence

Translation from 16 to 979

> BO14086.pep
MRFLVLSTLLLASLALGQAQQHGGLAVDAYWRTTNIEAWPPGAPVAEKSG
KLIAGSAPAQDLTPYGAYQPVLFSAPYYAAYNLPLAYVVQPTIASADQAT
IASATTTTTTTTTGRPESLADDSSSELEKPEKLQALPAVKTRTTGDLKSD
VGLRSAVSKINPEYVIEEIVPVPGKLVISTSGSPRSAKQQLKKAIAPQKM
RKQAGGRVPLKVEATGKTSTSSGNFPQIPFGNYFLPYRPEQAQAIQGRKQ
AALILEPHSKAVVGNGGTAISTPISKAYLKKGVPTNVYFNPESVAIAGVG
GKAHATADLELDLFTASFLDH

BO14086.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11905-PH 315 CG11905-PH 1..315 1..315 1589 100 Plus
CG11905-PE 315 CG11905-PE 1..315 1..315 1589 100 Plus
CG11905-PC 315 CG11905-PC 1..315 1..315 1589 100 Plus