Clone BO14094 Report

Search the DGRC for BO14094

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:140
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG5694-RA
Protein status:BO14094.pep: Imported from assembly
Sequenced Size:1903

Clone Sequence Records

BO14094.3prime Sequence

645 bp (633 high quality bases) assembled on 2006-05-29

> BO14094.3prime
ATGGTCTAGAAAGCTTGCAGAAGTTAAATCAATGGAAATTATACGCCCAG
TGCCATTGAAAGGCGGAGCCGCGGAAATCGCATCAAACGTACTACTCTCA
GTAGTCTGATTTGTAGTGCTTTTTTTCGAATTAGCCGAATGAGCGTACCA
GTCTGTGAGTGCGACCAAGTTCTTAGAAAAATTGCAGTTTTCCTGATTGT
ATTCCTTTCTGTGTCCCTCAGAATCAGCAAAAGTATTCGATGTACTCAGG
GAACCAACCAGTGAATGATTGGCTATCGAGTCTACGGTACAGCGACTAAT
TACTGAATTAGCCTTATAGTTTGAATAAATATATAAAGATTGCTGTAGGG
GCTTAACCGAATTATCAACTATTACTGATTCTGGCTCTGGAGCACATTTA
CTTGGCTCGACGACGCGGCTACTGTACAAATTTCTGTTGTTATGTGTAAG
TTTTATTACAGTCAGTGCATCCGAGCCAAGTCTTTTGGGCGAGCCTATTG
CTGGCTCTTGTTGCTCATCGTCGTCCGAGGAGCATAAGTCAATTGTATCA
ACAACAACTTCCTTTGTGGGTGAAATTCTCCAGTGTGAGTTGAGCGAATT
TGTGGCGCCGTTATCTTATATTGAGTTTTGTATTTGCAGTGTGAT

BO14094.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-PA 1872 CG5694-RA 1288..1869 600..19 2910 100 Minus
CG5694-PB 1872 CG5694-RB 1288..1869 600..19 2910 100 Minus
CG5694-PA 1872 CG5694-RA 1244..1275 645..614 160 100 Minus
CG5694-PB 1872 CG5694-RB 1244..1275 645..614 160 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-RB 2388 CG5694-RB 1659..2284 645..19 3065 99.5 Minus
CG5694-RA 2132 CG5694-RA 1403..2028 645..19 3065 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10227864..10228489 19..645 3025 99.2 Plus
Blast to na_te.dros performed on 2015-02-10 16:58:00 has no hits.

BO14094.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:56 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-PA 1244..1872 18..645 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:11:14 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-PB 1244..1872 18..645 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:45:54 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-RA 1403..2028 19..645 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:00:00 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-RA 1403..2028 19..645 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:00:00 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10227864..10228489 19..645 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:45:54 Download gff for BO14094.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10227864..10228489 19..645 99   Plus

BO14094.5prime Sequence

685 bp (668 high quality bases) assembled on 2006-05-29

> BO14094.5prime
GAAGTTATCAGTCGACATGGATGAAAAAGATAAAGCTCAACACAACATGA
TATCCAACCTACCACTTTTGTTTGCGAACGGATATCCAACATCCCTAGAA
AAAATTACGGAGTCCCAGTTAGAAAATTTTATTCCCTTCATGGTGCAATG
CTCTTTAGGACACATAAACTTACCAAAGAAAATAGATTGCAGTGAACCAG
AATGGTGGCCCGAAAGCGCTCCTTTCGAGATTCCGCTCAAAAAGCCGAAA
GCATTTGTTGGGAATTGGATGGAAAAAATGAAAGAAATTGTGGTTATATG
CTATCAATTTCACAAAAGCTTATTTCTATTAAGATTTTGTAATGATTTAG
CTGCGTATGAACACGCGAGCTTAAGATTCATAAACAATTATAACTCAACA
ACTTCATTGTATGACAGGAGAAACAACAAACTGTTGGTTACATTTCGAAA
TGAAAACATGTCATATGATAGACAACAAAAGAACAGAAAGTGCTTGTTGC
TGCAAAAGAACAACAGTTCCATTAGCGAAAACGTACAGCATATGATGGTT
GAGCCACCACCTTTTGATATCTACCTATGTGACAACTGTGATGCCGAACT
TTATTCTAAAGAAGCTATACTCGAACACGAAAACATTTGTTGCATGGAGG
ATGACGTTATACTTTGTGATTCCCCTGAGCCAAAT

BO14094.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-PA 1872 CG5694-RA 1..666 17..682 3330 100 Plus
CG5694-PB 1872 CG5694-RB 1..666 17..682 3330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-RB 2388 CG5694-RB 406..1081 7..682 3335 99.7 Plus
CG5694-RA 2132 CG5694-RA 160..825 17..682 3330 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10229705..10229950 262..17 1230 100 Minus
2L 23513712 2L 10229414..10229612 460..262 995 100 Minus
2L 23513712 2L 10229184..10229347 623..460 820 100 Minus
2L 23513712 2L 10229067..10229126 682..623 300 100 Minus
Blast to na_te.dros performed on 2015-02-11 11:13:13 has no hits.

BO14094.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:18:57 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-PA 1..669 17..685 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:11:16 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-PB 1..669 17..685 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:14:29 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-RB 404..1084 2..685 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:41:37 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5694-RB 404..1084 2..685 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:41:37 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10229064..10229126 623..685 98 <- Minus
2L 10229185..10229346 461..622 100 <- Minus
2L 10229414..10229611 263..460 100 <- Minus
2L 10229705..10229961 5..262 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:14:29 Download gff for BO14094.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10229064..10229126 623..685 98 <- Minus
arm_2L 10229185..10229346 461..622 100 <- Minus
arm_2L 10229414..10229611 263..460 100 <- Minus
arm_2L 10229705..10229961 5..262 98   Minus

BO14094.complete Sequence

1903 bp assembled on 2008-08-14

GenBank Submission: FJ633025

> BO14094.complete
GAAGTTATCAGTCGACATGGATGAAAAAGATAAAGCTCAACACAACATGA
TATCCAACCTACCACTTTTGTTTGCGAACGGATATCCAACATCCCTAGAA
AAAATTACGGAGTCCCAGTTAGAAAATTTTATTCCCTTCATGGTGCAATG
CTCTTTAGGACACATAAACTTACCAAAGAAAATAGATTGCAGTGAACCAG
AATGGTGGCCCGAAAGCGCTCCTTTCGAGATTCCGCTCAAAAAGCCGAAA
GCATTTGTTGGGAATTGGATGGAAAAAATGAAAGAAATTGTGGTTATATG
CTATCAATTTCACAAAAGCTTATTTCTATTAAGATTTTGTAATGATTTAG
CTGCGTATGAACACGCGAGCTTAAGATTCATAAACAATTATAACTCAACA
ACTTCATTGTATGACAGGAGAAACAACAAACTGTTGGTTACATTTCGAAA
TGAAAACATGTCATATGATAGACAACAAAAGAACAGAAAGTGCTTGTTGC
TGCAAAAGAACAACAGTTCCATTAGCGAAAACGTACAGCATATGATGGTT
GAGCCACCACCTTTTGATATCTACCTATGTGACAACTGTGATGCCGAACT
TTATTCTAAAGAAGCTATACTCGAACACGAAAACATTTGTTGCATGGAGG
ATGACGTTATACTTTGTGATTCCCCTGAGCCAGATAACAAAAGTGATGGG
AAAAACGAAGATATCGAACAGCGCAACGCCTTTCTCTTAAACTTTAAACT
GCAACCCAAATTCTCCGATAATAGTTTATCTAAAGAGAAACAGAAAACAT
ATTCATTCAGCGAAGAAACATCAACGGAAACATCAAACAGAAAGAGGCGT
TTACCATCGCGGAGAAATCGAACAGTTCATTCGTTTAGTAGGTGTTCGTT
TATCCCAATATCATCACCTGCAGGACAGCAATTGTTAAAATCGACAAAAC
AAACAATATCAATGGATTATATTGCGGAAAGACAGGAACGCCTGGAACGC
TTTTGTTACACTCCATTGATCAATAAATCAAATACCAAGCAAAAGTATTT
TGAAAAAAAAACAAACACTACAGTGCATTGTACATTTAAAAAGTCACATG
AACACAATTATCACATATATTCCTTTCCGCGGCGTCAATTTGTTAAACGC
AGGGACACTACTGAGAACTTTTTGTTTTTGAACTCTCCGCTGATTAAACA
ATGCCGTCCAATATCAGTCAGATTGAAAAAAATATCCGAACACGTAATGG
AAGAGCAAAATCACACTGCAAATACAAAACTCAATATAAGACTAACGCGC
CACAATTCGCTCAACTCACACTGGAGAATTTCACCCACAAAGGAAGTTGT
TGTTGATACAATTGACTTATGCTCCTCGGACGACGATGAGCAACAAGAGC
CAGCAATAGGCTCGCCCAAAAGACTTGGCTCGGATGCACTGACTGTAATA
AAACTTACACATAACAACAGAAATTTGTACAGTAGCCGCGTCGTCGAGCC
AAGTAAATGTGCTCCAGAGCCAGAATCAGTAATAGTTGATAATTCGGTTA
AGCCCCTACAGCAATCTTTATATATTTATTCAAACTATAAGGCTAATTCA
GTAATTAGTCGCTGTACCGTAGACTCGATAGCCAATCATTCACTGGTTGG
TTCCCTGAGTACATCGAATACTTTTGCTGATTCTGAGGGACACAGAAAGG
AATACAATCAGGAAAACTGCAATTTTTCTAAGAACTTGGTCGCACTCACA
GACTGGTACGCTCATTCGGCTAATTCGAAAAAAAGCACTACAAATCAGAC
TACTGAGAGTAGTACGTTTGATGCGATTTCCGCGGCTCCGCCTTTCAATG
GCACTGGGCGTATAATTTCCATTGATTTAACTTCTGCAAGCTTTCTAGAC
CAT

BO14094.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-RB 1872 CG5694-PB 1..1869 17..1885 9345 100 Plus
CG5694-RA 1872 CG5694-PA 1..1869 17..1885 9345 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-RB 2388 CG5694-RB 416..2284 17..1885 9345 100 Plus
CG5694-RA 2132 CG5694-RA 160..2028 17..1885 9345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10227864..10229126 1885..623 6315 100 Minus
2L 23513712 2L 10229705..10229950 262..17 1230 100 Minus
2L 23513712 2L 10229414..10229612 460..262 995 100 Minus
2L 23513712 2L 10229184..10229347 623..460 820 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:35:05 has no hits.

BO14094.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:39:33 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
CG5694-RB 401..2281 2..1885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:33 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
CG5694-RA 160..2028 17..1887 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:45 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
CG5694-RB 413..2281 17..1887 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:22:37 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
CG5694-RA 160..2028 17..1887 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:22:37 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10229705..10229950 17..262 100   Minus
2L 10229414..10229611 263..460 100 <- Minus
2L 10227862..10229126 623..1887 99 <- Minus
2L 10229185..10229346 461..622 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:33 Download gff for BO14094.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10227862..10229126 623..1887 99 <- Minus
arm_2L 10229185..10229346 461..622 100 <- Minus
arm_2L 10229414..10229611 263..460 100 <- Minus
arm_2L 10229705..10229950 17..262 100   Minus

BO14094.pep Sequence

Translation from 16 to 1903

> BO14094.pep
MDEKDKAQHNMISNLPLLFANGYPTSLEKITESQLENFIPFMVQCSLGHI
NLPKKIDCSEPEWWPESAPFEIPLKKPKAFVGNWMEKMKEIVVICYQFHK
SLFLLRFCNDLAAYEHASLRFINNYNSTTSLYDRRNNKLLVTFRNENMSY
DRQQKNRKCLLLQKNNSSISENVQHMMVEPPPFDIYLCDNCDAELYSKEA
ILEHENICCMEDDVILCDSPEPDNKSDGKNEDIEQRNAFLLNFKLQPKFS
DNSLSKEKQKTYSFSEETSTETSNRKRRLPSRRNRTVHSFSRCSFIPISS
PAGQQLLKSTKQTISMDYIAERQERLERFCYTPLINKSNTKQKYFEKKTN
TTVHCTFKKSHEHNYHIYSFPRRQFVKRRDTTENFLFLNSPLIKQCRPIS
VRLKKISEHVMEEQNHTANTKLNIRLTRHNSLNSHWRISPTKEVVVDTID
LCSSDDDEQQEPAIGSPKRLGSDALTVIKLTHNNRNLYSSRVVEPSKCAP
EPESVIVDNSVKPLQQSLYIYSNYKANSVISRCTVDSIANHSLVGSLSTS
NTFADSEGHRKEYNQENCNFSKNLVALTDWYAHSANSKKSTTNQTTESST
FDAISAAPPFNGTGRIISIDLTSASFLDH

BO14094.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5694-PB 623 CG5694-PB 1..623 1..623 3290 100 Plus
CG5694-PA 623 CG5694-PA 1..623 1..623 3290 100 Plus