Clone BO14109 Report

Search the DGRC for BO14109

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:141
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG6429-RA
Protein status:BO14109.pep: Imported from assembly
Sequenced Size:511

Clone Sequence Records

BO14109.complete Sequence

511 bp assembled on 2010-07-02

GenBank Submission: KX796645

> BO14109.complete
GAAGTTATCAGTCGACATGCATAGTGCACATATATTATTTTTCGTACTCG
GGCTCACATTCGTTGGCATTTGGGTTCAAGCCGAGGTCCAAAAACCCATC
ACGGAACAATGCCTGATCTGTATGTGTGAGGCTTTGAGTGGCTGCAACGC
GACGGCTGTGTGCGTGAATGGGGCATGTGGCATTTTCAGGATCACTTGGG
ATCAGTGGGTGGACTCAGGCAGATTGACCATACCTGGCGACTCGCCATTG
ACGGATAGTTCTTTTACCAACTGCGCCAATGATCCGTATTGTGCGGCCGA
TACTTTGCAGAGTTATATGGTGAAGTACGGACAGGATTGCAACGATGATC
AGAAGGAGGACTGTTACGATTATGGTGCCATTCACTATATGGGTCCCTTC
AACTGCAAGGCGGATATGCCCTACACCTACGAGAGCATTTTCAAACGATG
TTTGAGGAACGCGATGCGGAATGACAAGCGTCAGAATTCCAGCGCAAGCT
TTCTAGACCAT

BO14109.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6429-RA 480 CG6429-PA 1..477 17..493 2385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG6429-RA 672 CG6429-RA 62..538 17..493 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16873076..16873319 17..260 1220 100 Plus
2R 25286936 2R 16873389..16873621 261..493 1165 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:18:21 has no hits.

BO14109.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:30 Download gff for BO14109.complete
Subject Subject Range Query Range Percent Splice Strand
CG6429-RA 60..536 17..495 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:08 Download gff for BO14109.complete
Subject Subject Range Query Range Percent Splice Strand
CG6429-RA 62..538 17..495 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:18 Download gff for BO14109.complete
Subject Subject Range Query Range Percent Splice Strand
CG6429-RA 62..538 17..495 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:18 Download gff for BO14109.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16873389..16873621 261..495 99   Plus
2R 16873076..16873319 17..260 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:08 Download gff for BO14109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12760581..12760824 17..260 100 -> Plus
arm_2R 12760894..12761126 261..495 99   Plus

BO14109.pep Sequence

Translation from 16 to 511

> BO14109.pep
MHSAHILFFVLGLTFVGIWVQAEVQKPITEQCLICMCEALSGCNATAVCV
NGACGIFRITWDQWVDSGRLTIPGDSPLTDSSFTNCANDPYCAADTLQSY
MVKYGQDCNDDQKEDCYDYGAIHYMGPFNCKADMPYTYESIFKRCLRNAM
RNDKRQNSSASFLDH

BO14109.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6429-PA 159 CG6429-PA 1..159 1..159 889 100 Plus
CG6435-PA 163 CG6435-PA 19..148 23..151 465 56.9 Plus
CG6421-PA 161 CG6421-PA 27..152 24..146 454 57.1 Plus
CG6426-PA 161 CG6426-PA 24..160 20..157 425 49.3 Plus