BO14109.complete Sequence
511 bp assembled on 2010-07-02
GenBank Submission: KX796645
> BO14109.complete
GAAGTTATCAGTCGACATGCATAGTGCACATATATTATTTTTCGTACTCG
GGCTCACATTCGTTGGCATTTGGGTTCAAGCCGAGGTCCAAAAACCCATC
ACGGAACAATGCCTGATCTGTATGTGTGAGGCTTTGAGTGGCTGCAACGC
GACGGCTGTGTGCGTGAATGGGGCATGTGGCATTTTCAGGATCACTTGGG
ATCAGTGGGTGGACTCAGGCAGATTGACCATACCTGGCGACTCGCCATTG
ACGGATAGTTCTTTTACCAACTGCGCCAATGATCCGTATTGTGCGGCCGA
TACTTTGCAGAGTTATATGGTGAAGTACGGACAGGATTGCAACGATGATC
AGAAGGAGGACTGTTACGATTATGGTGCCATTCACTATATGGGTCCCTTC
AACTGCAAGGCGGATATGCCCTACACCTACGAGAGCATTTTCAAACGATG
TTTGAGGAACGCGATGCGGAATGACAAGCGTCAGAATTCCAGCGCAAGCT
TTCTAGACCAT
BO14109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6429-RA | 480 | CG6429-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6429-RA | 672 | CG6429-RA | 62..538 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:18:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16873076..16873319 | 17..260 | 1220 | 100 | Plus |
2R | 25286936 | 2R | 16873389..16873621 | 261..493 | 1165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:18:21 has no hits.
BO14109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:30 Download gff for
BO14109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6429-RA | 60..536 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:08 Download gff for
BO14109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6429-RA | 62..538 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:18 Download gff for
BO14109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6429-RA | 62..538 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:18 Download gff for
BO14109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16873389..16873621 | 261..495 | 99 | | Plus |
2R | 16873076..16873319 | 17..260 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:08 Download gff for
BO14109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12760581..12760824 | 17..260 | 100 | -> | Plus |
arm_2R | 12760894..12761126 | 261..495 | 99 | | Plus |
BO14109.pep Sequence
Translation from 16 to 511
> BO14109.pep
MHSAHILFFVLGLTFVGIWVQAEVQKPITEQCLICMCEALSGCNATAVCV
NGACGIFRITWDQWVDSGRLTIPGDSPLTDSSFTNCANDPYCAADTLQSY
MVKYGQDCNDDQKEDCYDYGAIHYMGPFNCKADMPYTYESIFKRCLRNAM
RNDKRQNSSASFLDH
BO14109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6429-PA | 159 | CG6429-PA | 1..159 | 1..159 | 889 | 100 | Plus |
CG6435-PA | 163 | CG6435-PA | 19..148 | 23..151 | 465 | 56.9 | Plus |
CG6421-PA | 161 | CG6421-PA | 27..152 | 24..146 | 454 | 57.1 | Plus |
CG6426-PA | 161 | CG6426-PA | 24..160 | 20..157 | 425 | 49.3 | Plus |