Clone BO14131 Report

Search the DGRC for BO14131

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:141
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG17572-RA
Protein status:BO14131.pep: Imported from assembly
Sequenced Size:1189

Clone Sequence Records

BO14131.complete Sequence

1189 bp assembled on 2010-11-19

GenBank Submission: KX797445

> BO14131.complete
GAAGTTATCAGTCGACATGTACGCGTTAACAATACTTTTACCAATTTTGC
AACTATTTGCAATCGTTCGAGCGGAATCGGGAGAATTCGAGAAACTCCTG
GTGCCCGTGAGCCACGGAAGCGCAGAGCAAAGGAGCGGAGCACGGAGCAA
CGAGACTACTGGACACTCGGTGGCCGCCCGCTCCTACTACGACGTGGTGC
AAAACGCCGGACAGACGGGCTGCTCCGTGGGCACCGAGTGCACCCCGCTC
CACGACTGCACCGCCCTGATCTACGAGGTTGCCCGGAGTTGCTACTACGG
CGACAAGTCGCTCTACTGCGGCGGATCCAGCGAGGAGCTGCCCTACGTCT
GCTGCCCCAGCAGTCCGTTGGAGAAGAACCAGGTGTGCGGCAAGTCACTG
GTCCAGGGGCACTTCTACAAGGGACTGGGCTCCTATCCCTTTGTCGCGCG
CATCGGCTTCAAACATGTCAACACTGGAGCTTTTGCTTATCCGTGTGCCG
GAGCCGTAATTGCCCGCCGGGTCATCCTCACGGCCGCCCATTGCGCTCTG
GCCAAGGCCGATGGACACCGACTGTCATCGGTGCGCGTGGGCGAGTACGA
TACTAGTAGCGATCCGGACTGCGCCAACACCGGATTCTGTGCACCGCGGT
CGGTCAACCACGCCATCAGCCATGTGATCGTGCATCCCGACTACAAGCAG
GGCCAGTATCACCATGACATTGCTCTGCTGGTGCTTAAAACGCCGCTAAA
CTATTCGGTGGCTACACAGCCCATCTGCCTGCAGAAGACACGCGCCAACC
TGGTGGTGGGCAAACGGGCTACCATCGCCGGTTGGGGCAAGATGTCCACG
TCGAGTGTCCGCCAGCCGGAGATGTCGCATCTGGACGTGCCGCTGACCAG
CTGGGACCTGTGCCTGCGCAACTACGGCTCCACGGGTGCCCTGGAATCGC
CCAACTCCATCGAGGGTCAATGGATGTGCGCCGGCGGCGAGGGCAAGGAC
GTCTGCCAAGGATTCGGCGGAGCACCGCTTTTCATACAAGAGAACGGCAT
CTTTTCACAGATCGGCATCATGTCCTTTGGATCTGATAACTGCGGCGGTC
TGCGCATCCCGAGTGTCTACACATCCGTGGCCCACTTTTCCGAGTGGATT
CACGACAACACGCCGCCGGAGGCAAGCTTTCTAGACCAT

BO14131.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG17572-RA 1158 CG17572-PA 1..1155 17..1171 5775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG17572-RA 1344 CG17572-RA 126..1280 17..1171 5775 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19073308..19073683 464..89 1880 100 Minus
2L 23513712 2L 19071424..19071726 1060..758 1515 100 Minus
2L 23513712 2L 19072831..19073015 758..574 925 100 Minus
2L 23513712 2L 19071195..19071310 1171..1056 580 100 Minus
2L 23513712 2L 19073104..19073214 575..465 555 100 Minus
2L 23513712 2L 19073952..19074024 89..17 365 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:35:51 has no hits.

BO14131.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-19 09:48:55 Download gff for BO14131.complete
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 123..1277 17..1173 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:24 Download gff for BO14131.complete
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 126..1280 17..1173 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:27 Download gff for BO14131.complete
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 126..1280 17..1173 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:27 Download gff for BO14131.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19071193..19071305 1061..1173 98 <- Minus
2L 19071424..19071725 759..1060 100 <- Minus
2L 19072831..19073015 574..758 100 <- Minus
2L 19073106..19073214 465..573 100 <- Minus
2L 19073308..19073682 90..464 100 <- Minus
2L 19073952..19074024 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:24 Download gff for BO14131.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19071193..19071305 1061..1173 98 <- Minus
arm_2L 19071424..19071725 759..1060 100 <- Minus
arm_2L 19072831..19073015 574..758 100 <- Minus
arm_2L 19073106..19073214 465..573 100 <- Minus
arm_2L 19073308..19073682 90..464 100 <- Minus
arm_2L 19073952..19074024 17..89 100   Minus

BO14131.5prime Sequence

755 bp (558 high quality bases) assembled on 2010-02-20

> BO14131.5prime
TAACAATACTTTTACCAATTTTGCAACTATTTGCAATCGTTCGAGCGGAA
TCGGGAGAATTCGAGAAACTCCTGGTGCCCGTGAGCCACGGAAGCGCAGA
GCAAAGGAGCGGAGCACGGAGCAACGAGACTACTGGACACTCGGTGGCCG
CCCGCTCCTACTACGACGTGGTGCAAAACGCCGGACAGACGGGCTGCTCC
GTGGGCACCGAGTGCACCCCGCTCCACGACTGCACCGCCCTGATCTACGA
GGTTGCCCGGAGTTGCTACTACGGCGACAAGTCGCTCTACTGCGGCGGAT
CCAGCGAGGAGCTGCCCTACGTCTGCTGCCCCAGCAGTCCGTTGGAGAAG
AACCAGGTGTGCGGCAAGTCACTGGTCCAGGGGCACTTCTACAAGGGACT
GGGCTCCTATCCCTTTTGTCGCGCGCATCGGCTTCAAACATGTCAACACT
GGAGCTTTTGCTTATCCGTGTGCCGGACCCGTAATTGCCCGCCGGGTCAT
CCTCACGGCCGCCCATTTGCGCTCTGGCCAAGGCCGATGGACACCGACTG
TCATCGGTGCGCGTGGGCGAATACCATACTAGTAACGATCCGGACTGCGC
CCACACCGGATTCTGTGCCCCGCGGTCGGGCCACCACCCCATCAGCCATG
TGATCGTGCATCCCGAACTACAAGCAGGGCCAGTATCACCATGAATTTGG
TCTGCTGGTGCTTAAAACGCCGCTAAACATTCCGGGGGCTCCCAGCCCAT
CTTGC

BO14131.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17572-RA 1344 CG17572-RA 136..885 1..752 3410 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19073308..19073683 439..63 1835 99.7 Minus
2L 23513712 2L 19072838..19073015 728..550 680 93.3 Minus
2L 23513712 2L 19073104..19073214 551..440 495 98.2 Minus
2L 23513712 2L 19073952..19074014 63..1 315 100 Minus
Blast to na_te.dros performed on 2015-02-11 04:53:49 has no hits.

BO14131.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 04:02:33 Download gff for BO14131.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 133..882 1..752 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 08:38:20 Download gff for BO14131.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 136..885 1..752 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:38:25 Download gff for BO14131.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 136..885 1..752 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:38:25 Download gff for BO14131.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19072830..19073015 550..736 92 <- Minus
2L 19073106..19073214 440..549 98 <- Minus
2L 19073308..19073682 64..439 99 <- Minus
2L 19073952..19074014 1..63 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 08:38:20 Download gff for BO14131.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19072830..19073015 550..736 92 <- Minus
arm_2L 19073106..19073214 440..549 98 <- Minus
arm_2L 19073308..19073682 64..439 99 <- Minus
arm_2L 19073952..19074014 1..63 100   Minus

BO14131.3prime Sequence

665 bp (446 high quality bases) assembled on 2010-02-20

> BO14131.3prime
CTCGGAAAAGTGGGCCACGGATGTGTAGACACTCGGGATGCGCAGACCGC
CGCAGTTATCAGATCCAAAGGACATGATGCCGATCTGTGAAAAGATGCCG
TTCTCTTGTATGAAAAGCGGTGCTCCGCCGAATCCTTGGCAGACGTCCTT
GCCCTCGCCGCCGGCGCACATCCATTGACCCTCGATGGAGTTGGGCGATT
CCAGGGCACCCGTGGAGCCGTAGTTGCGCAGGCACAGGTCCCAGCTGGTC
AGCGGCACGTCCAGATGCGACATCTCCGGCTGGCGGACACTCGACGTGGA
CATCTTGCCCCAACCGGCGATGGTAGCCCGTTTGCCCACCACCAGGTTGG
CGCGTGTCTTCTGCAGGCAGATGGGCTGTGTAGCCCCCGAATATTTTAGC
GGCGTTTTAAGCACCAGCAGAGCAATGTCATGGTGATACTGGGCCCCTGC
TTGTAGTCGGGATGCACGATCCACTTGGTTGATGGCGTGGTTGACCGACC
GCGGGGCACAAAATCCGGGGTTGGCGCAATCCGGATCGCTACTAGTATCG
TACTCGCCCACGCCCACCGATGACAGTCGGTGCCCTCCGGCCTTGGCCAA
AGCGAAATGGGCGGGCGTGAGGATGACCCGGCGGGCAATTCGGGTCCGGG
ACACGGATAAACCAA

BO14131.3prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG17572-RA 1344 CG17572-RA 596..1253 660..1 2960 96.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19071424..19071724 85..385 1505 100 Plus
2L 23513712 2L 19072830..19073015 386..574 710 94.2 Plus
2L 23513712 2L 19071222..19071310 1..89 445 100 Plus
2L 23513712 2L 19073104..19073192 573..660 275 89.9 Plus
Blast to na_te.dros performed on 2015-02-12 06:16:23 has no hits.

BO14131.3prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 04:02:32 Download gff for BO14131.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 590..1250 1..663 96   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 08:53:03 Download gff for BO14131.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 593..1253 1..663 96   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:00:16 Download gff for BO14131.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17572-RA 593..1253 1..663 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:00:16 Download gff for BO14131.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19071222..19071305 1..84 100 <- Plus
2L 19071424..19071725 85..386 99 <- Plus
2L 19072831..19073015 387..574 94 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 08:53:03 Download gff for BO14131.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19071222..19071305 1..84 100 <- Plus
arm_2L 19071424..19071725 85..386 99 <- Plus
arm_2L 19072831..19073015 387..574 94 <- Plus

BO14131.pep Sequence

Translation from 16 to 1189

> BO14131.pep
MYALTILLPILQLFAIVRAESGEFEKLLVPVSHGSAEQRSGARSNETTGH
SVAARSYYDVVQNAGQTGCSVGTECTPLHDCTALIYEVARSCYYGDKSLY
CGGSSEELPYVCCPSSPLEKNQVCGKSLVQGHFYKGLGSYPFVARIGFKH
VNTGAFAYPCAGAVIARRVILTAAHCALAKADGHRLSSVRVGEYDTSSDP
DCANTGFCAPRSVNHAISHVIVHPDYKQGQYHHDIALLVLKTPLNYSVAT
QPICLQKTRANLVVGKRATIAGWGKMSTSSVRQPEMSHLDVPLTSWDLCL
RNYGSTGALESPNSIEGQWMCAGGEGKDVCQGFGGAPLFIQENGIFSQIG
IMSFGSDNCGGLRIPSVYTSVAHFSEWIHDNTPPEASFLDH

BO14131.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG17572-PA 385 CG17572-PA 1..385 1..385 2065 100 Plus
Ser7-PA 397 CG2045-PA 118..388 118..378 323 31.4 Plus
CG31219-PB 345 CG31219-PB 65..339 111..378 318 32.4 Plus
CG31728-PC 639 CG31728-PC 377..637 102..381 307 28.9 Plus
MP1-PA 390 CG1102-PA 158..387 160..381 300 32.9 Plus