Clone Sequence Records
BO14134.3prime Sequence
458 bp (457 high quality bases) assembled on 2006-05-29
> BO14134.3prime
ATGGTCTAGAAAGCTTGCGGCCTTCGGGGCCAGGCTCTTCTGGATCTGGG
CCAGGTTCTCCTTCAGCAGACAGGTGGCTCCGCGGTAGGCCCACTCGCAG
GCATTGGATCCCTGCTCGTTCTTGTCCACGCAGGCGGCCAAGGAGGCGTG
GAAGGCCTCGTTGTGGTCAGCGTGGTTGCCCACCAGCTGTTGGTGGATGT
TCTCCACGTTGAAACCGCTCTGGACGTCGAACAGGCCCCACTTGGTGAAG
ACGCACTTGATGTAGCACTGGGTCTTGGCGTCGTTGGGGTACTCCCACTT
CTGGTACTTCTCCACCAGATCCACGGGCACGGCCAGCTCCTTGACGCACT
CATCGCGGTAGGCCAGCATGTCGTGTCGGTTCTTCACCACATAGTCGGCG
GAGGCCAGTCCAATCAGCACGCAGATGGCAACGAAAACCTTCATGTCGAC
TGATAACT
BO14134.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18111-PA | 429 | Obp99a-RA | 1..426 | 444..19 | 2130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..485 | 444..19 | 2130 | 100 | Minus |
Obp99a-RA | 610 | CG18111-RA | 60..485 | 444..19 | 2130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:51:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672209 | 406..19 | 1940 | 100 | Minus |
3R | 32079331 | 3R | 29671716..29671755 | 444..405 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:51:56 has no hits.
BO14134.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:28 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 18..444 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:11:58 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 18..444 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:13:10 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..485 | 19..451 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:05:55 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..485 | 19..451 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:05:55 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671709..29671754 | 406..451 | 93 | -> | Minus |
3R | 29671823..29672209 | 19..405 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:13:10 Download gff for
BO14134.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497431..25497476 | 406..451 | 93 | -> | Minus |
arm_3R | 25497545..25497931 | 19..405 | 100 | | Minus |
BO14134.5prime Sequence
458 bp (457 high quality bases) assembled on 2006-05-29
> BO14134.5prime
GAAGTTATCAGTCGACATGAAGGTTTTCGTTGCCATCTGCGTGCTGATTG
GACTGGCCTCCGCCGACTATGTGGTGAAGAACCGACACGACATGCTGGCC
TACCGCGATGAGTGCGTCAAGGAGCTGGCCGTGCCCGTGGATCTGGTGGA
GAAGTACCAGAAGTGGGAGTACCCCAACGACGCCAAGACCCAGTGCTACA
TCAAGTGCGTCTTCACCAAGTGGGGCCTGTTCGACGTCCAGAGCGGTTTC
AACGTGGAGAACATCCACCAACAGCTGGTGGGCAACCACGCTGACCACAA
CGAGGCCTTCCACGCCTCCTTGGCCGCCTGCGTGGACAAGAACGAGCAGG
GATCCAATGCCTGCGAGTGGGCCTACCGCGGAGCCACCTGTCTGCTGAAG
GAGAACCTGGCCCAGATCCAGAAGAGCCTGGCCCCGAAGGCCGCAAGCTT
TCTAGACC
BO14134.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18111-PA | 429 | Obp99a-RA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:37:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..485 | 17..442 | 2130 | 100 | Plus |
Obp99a-RA | 610 | CG18111-RA | 60..485 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:37:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672209 | 55..442 | 1940 | 100 | Plus |
3R | 32079331 | 3R | 29671716..29671755 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 08:37:47 has no hits.
BO14134.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:30 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:00 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:49:17 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..485 | 10..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:22:25 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..485 | 10..442 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:22:25 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671709..29671754 | 10..55 | 93 | -> | Plus |
3R | 29671823..29672209 | 56..442 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:49:17 Download gff for
BO14134.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497431..25497476 | 10..55 | 93 | -> | Plus |
arm_3R | 25497545..25497931 | 56..442 | 100 | | Plus |
BO14134.complete Sequence
460 bp assembled on 2006-10-11
GenBank Submission: FJ633027
> BO14134.complete
GAAGTTATCAGTCGACATGAAGGTTTTCGTTGCCATCTGCGTGCTGATTG
GACTGGCCTCCGCCGACTATGTGGTGAAGAACCGACACGACATGCTGGCC
TACCGCGATGAGTGCGTCAAGGAGCTGGCCGTGCCCGTGGATCTGGTGGA
GAAGTACCAGAAGTGGGAGTACCCCAACGACGCCAAGACCCAGTGCTACA
TCAAGTGCGTCTTCACCAAGTGGGGCCTGTTCGACGTCCAGAGCGGTTTC
AACGTGGAGAACATCCACCAACAGCTGGTGGGCAACCACGCTGACCACAA
CGAGGCCTTCCACGCCTCCTTGGCCGCCTGCGTGGACAAGAACGAGCAGG
GATCCAATGCCTGCGAGTGGGCCTACCGCGGAGCCACCTGTCTGCTGAAG
GAGAACCTGGCCCAGATCCAGAAGAGCCTGGCCCCGAAGGCCGCAAGCTT
TCTAGACCAT
BO14134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 429 | CG18111-PB | 1..426 | 17..442 | 2130 | 100 | Plus |
Obp99a-RA | 429 | CG18111-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..485 | 17..442 | 2130 | 100 | Plus |
Obp99a-RA | 610 | CG18111-RA | 60..485 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672209 | 55..442 | 1940 | 100 | Plus |
3R | 32079331 | 3R | 29671716..29671755 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:05:39 has no hits.
BO14134.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:23:14 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 1..429 | 17..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:43:08 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 50..482 | 10..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:01 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 60..485 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:23:15 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 50..482 | 10..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:21 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 60..485 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:21 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671716..29671754 | 17..55 | 100 | -> | Plus |
3R | 29671823..29672209 | 56..444 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:01 Download gff for
BO14134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497438..25497476 | 17..55 | 100 | -> | Plus |
arm_3R | 25497545..25497931 | 56..444 | 99 | | Plus |
BO14134.pep Sequence
Translation from 16 to 460
> BO14134.pep
MKVFVAICVLIGLASADYVVKNRHDMLAYRDECVKELAVPVDLVEKYQKW
EYPNDAKTQCYIKCVFTKWGLFDVQSGFNVENIHQQLVGNHADHNEAFHA
SLAACVDKNEQGSNACEWAYRGATCLLKENLAQIQKSLAPKAASFLDH
BO14134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-PB | 142 | CG18111-PB | 1..142 | 1..142 | 764 | 100 | Plus |
Obp99a-PA | 142 | CG18111-PA | 1..142 | 1..142 | 764 | 100 | Plus |
Obp99b-PB | 149 | CG7592-PB | 3..147 | 5..138 | 290 | 37.9 | Plus |
Obp99b-PA | 149 | CG7592-PA | 3..147 | 5..138 | 290 | 37.9 | Plus |
Obp44a-PB | 143 | CG2297-PB | 5..140 | 3..138 | 278 | 42.3 | Plus |