Clone Sequence Records
BO14145.5prime Sequence
521 bp (520 high quality bases) assembled on 2006-05-29
> BO14145.5prime
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCGAGTGCANCAAATTGAGGA
AAGCAAGCTTTCTAAACCATT
BO14145.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9686-PA | 489 | CG9686-RA | 1..486 | 17..502 | 2336 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9686-RA | 666 | CG9686-RA | 81..566 | 17..502 | 2374 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9879950..9880435 | 17..502 | 2374 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:35:49 has no hits.
BO14145.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:42 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-PA | 1..489 | 17..503 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:17 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-PA | 1..489 | 17..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:57:54 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 72..566 | 6..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:38:25 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 72..566 | 6..502 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:38:25 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9879941..9880435 | 6..502 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:57:54 Download gff for
BO14145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9773974..9774468 | 6..502 | 98 | | Plus |
BO14145.complete Sequence
520 bp assembled on 2008-08-15
GenBank Submission: FJ633030
> BO14145.complete
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCAACTGCAGCAAATTGAGGA
AAGCAAGCTTTCTAGACCAT
BO14145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:55:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9686-RA | 489 | CG9686-PA | 1..486 | 17..502 | 2415 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:55:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9686-RA | 666 | CG9686-RA | 81..566 | 17..502 | 2415 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9879950..9880435 | 17..502 | 2415 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:55:13 has no hits.
BO14145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:46:26 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 73..567 | 6..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:41:26 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 81..566 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:56:52 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 82..567 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:51 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9686-RA | 81..566 | 17..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:51 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9879950..9880435 | 17..504 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:41:26 Download gff for
BO14145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9773983..9774468 | 17..504 | 99 | | Plus |
BO14145.pep Sequence
Translation from 16 to 520
> BO14145.pep
MNSLQGSLVLLLLAGVFLQSQAGLFDCEDKIPGLGDVSDKISEITGSSSS
SEHEVRDFFKNVGCHIKEGAKKLGEKAKDLGTELKEGAQKLGEKAKVLGS
DLKDRFDDFRDKLAKDSAEEMSKDRGFLANVEIINPDILKGEQQCGHGHI
LDALGNCSKLRKASFLDH
BO14145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9686-PA | 162 | CG9686-PA | 1..162 | 1..162 | 827 | 100 | Plus |
