Clone Sequence Records
BO14151.3prime Sequence
738 bp (633 high quality bases) assembled on 2006-05-29
> BO14151.3prime
ATGGTCTAGAAAGCTTGCGCTACTTTCAGCTTGTCCAAAGGGGCCTCCAC
TATTGCCTCCAGTAACTAATCCTCCTGGATTTTGGCCCAGAGGACCACCT
ATCTTACCTCCTTCGATTAGACCACCTTCACTGTGATCGATTGTCGCTTC
TTTGCTTTCGAAGGGACCTCCACTGTTTCCGCCAGCAATCAGTCCTCCAA
GTTGATTTCTGTTTGCAAATGGACCTCCAGTATTACTGCCACTAGTTAGC
CCTCCCCCATGAAATCTTCCTTGATTCCTCCCAAAAGGGCCTCCACTATT
GGCACCAAAAATAAGTCCTTCATACGTCCCTTCATTACTATTTGCCCATG
GGTCACTTCCAAAAGGGCCTCCAGAATTTCCTCCGGAAATTAAACCTCCT
TGATGATCACTGGCAAATGGTCCTCCAGTATTAGCTCCACTGAGCAGACC
GCTTCCACTATTCAAACCAAATAATCCTTGGTTGCTGTTAAAAGGACCAC
CACTGTTGGCATCAGAAATTAGTCCTTCTTTGGTAAAGGAGCTGCCAGTT
TGGGCAAAGGGTCCTCCACTACTTCCGCCCAGAAATAAGTCCTCCTTGCT
GATTGGTAGCAAGTAGTCCTCCATTTACTGATCCGTAGTTTCCATAATTA
CCAAAGGGACCTCCCCGTATCCACTCCAGAGATTAAACCCTCTTGAGCAG
TACTTTCGTATGGACCTCCTGGCCCCCTTTCCTCACTT
BO14151.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 849 | CG30151-RA | 286..846 | 579..19 | 2780 | 99.8 | Minus |
CG30151-PA | 849 | CG30151-RA | 201..287 | 665..579 | 435 | 100 | Minus |
CG30151-PA | 849 | CG30151-RA | 143..203 | 724..664 | 305 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 153..870 | 738..19 | 3490 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:54:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528595..20529312 | 19..738 | 3440 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:54:04 has no hits.
BO14151.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:50 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-PA | 129..849 | 15..738 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:29 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-PA | 129..849 | 15..738 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:13:18 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 153..873 | 15..738 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:10:13 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 153..873 | 15..738 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:10:13 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528591..20529312 | 15..738 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:13:18 Download gff for
BO14151.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416096..16416817 | 15..738 | 98 | | Plus |
BO14151.5prime Sequence
619 bp (583 high quality bases) assembled on 2006-05-29
> BO14151.5prime
GAAGTTATCAGTCGACATGAGGTCGTTTTTGCTGATGATGATGCTGTTGC
TTGGAACAAGTTGGGCACAACTTGTTTACCGGGACTATAGCTCACAAATC
GGTGGAGGATTTTATAGACCCCAAAGAGGACAATATGGACTGATAAGTGA
TGGAAGGCGGCCAGGAGGTCCATACGAAAGTACTGCTCAAGAGGGTTTAA
TCTCTGGAGTGGATACGGGAGGTCCCTTTGGTAATTATGGAAACTACGGA
TCAGTAAATGGAGGACTACTTGCTACCAATCAGCAAGGAGGACTTATTTC
TGGCGGAAGTAGTGGAGGACCCTTTGCCCAAACTGGCAGCTCCTTTACCA
AAGAAGGACTAATTTCTGATGCCAACAGTGGTGGTCCTTTTAACAGCAAC
CAAGGATTATTTGGTTTGAATAGTGGAAGCGGTCTGCTCAGTGGAGCTAA
TACTGGAGGACCATTTGCCAGTGATCATCAAGGAGGTTTAATTTCCGGAG
GAAATTCTGGAGGCCCTTTTGGAAGTGACCCATGGGCCAATAGTAATGAA
GGGACGTATGAAGGACTTATTTTTGGTGCCAATAGTGGAGGCCCTTTTGG
GAGGAATCAAGGAAGATTT
BO14151.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 849 | CG30151-RA | 1..603 | 17..619 | 2990 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 25..627 | 17..619 | 3000 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:32:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528838..20529440 | 619..17 | 3000 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:33:00 has no hits.
BO14151.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:51 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-PA | 1..603 | 17..619 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:31 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-PA | 1..603 | 17..619 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:32:03 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..627 | 17..619 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:34:49 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..627 | 17..619 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:34:49 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528838..20529441 | 16..619 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:32:03 Download gff for
BO14151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416343..16416946 | 16..619 | 99 | -> | Minus |
BO14151.complete Sequence
880 bp assembled on 2006-10-11
GenBank Submission: FJ633032
> BO14151.complete
GAAGTTATCAGTCGACATGAGGTCGTTTTTGCTGATGATGATGCTGTTGC
TTGGAACAAGTTGGGCACAACTTGTTTACCGGGACTATAGCTCACAAATC
GGTGGAGGATTTTATAGACCCCAAAGAGGACAATATGGACTGATAAGTGA
TGGAAGGCGGCCAGGAGGTCCATACGAAAGTACTGCTCAAGAGGGTTTAA
TCTCTGGAGTGGATACGGGAGGTCCCTTTGGTAATTATGGAAACTACGGA
TCAGTAAATGGAGGACTACTTGCTACCAATCAGCAAGGAGGACTTATTTC
TGGCGGAAGTAGTGGAGGACCCTTTGCCCAAACTGGCAGCTCCTTTACCA
AAGAAGGACTAATTTCTGATGCCAACAGTGGTGGTCCTTTTAACAGCAAC
CAAGGATTATTTGGTTTGAATAGTGGAAGCGGTCTGCTCAGTGGAGCTAA
TACTGGAGGACCATTTGCCAGTGATCATCAAGGAGGTTTAATTTCCGGAG
GAAATTCTGGAGGCCCTTTTGGAAGTGACCCATGGGCAAATAGTAATGAA
GGGACGTATGAAGGACTTATTTTTGGTGCCAATAGTGGAGGCCCTTTTGG
GAGGAATCAAGGAAGATTTCATGGGGGAGGGCTAACTAGTGGCAGTAATA
CTGGAGGTCCATTTGCAAACAGAAATCAACTTGGAGGACTGATTGCTGGC
GGAAACAGTGGAGGTCCCTTCGAAAGCAAAGAAGCGACAATCGATCACAG
TGAAGGTGGTCTAATCGAAGGAGGTAAGATAGGTGGTCCTCTGGGCCAAA
ATCCAGGAGGATTAGTTACTGGAGGCAATAGTGGAGGCCCCTTTGGACAA
GCTGAAAGTAGCGCAAGCTTTCTAGACCAT
BO14151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:23:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 849 | CG30151-PA | 1..846 | 17..862 | 4215 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:23:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 25..870 | 17..862 | 4215 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528595..20529440 | 862..17 | 4215 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:23:14 has no hits.
BO14151.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:22:50 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:56:45 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..873 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:13 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..870 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:22:51 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..873 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:35 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..870 | 17..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:35 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528593..20529440 | 17..864 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:13 Download gff for
BO14151.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416098..16416945 | 17..864 | 99 | | Minus |
BO14151.pep Sequence
Translation from 16 to 880
> BO14151.pep
MRSFLLMMMLLLGTSWAQLVYRDYSSQIGGGFYRPQRGQYGLISDGRRPG
GPYESTAQEGLISGVDTGGPFGNYGNYGSVNGGLLATNQQGGLISGGSSG
GPFAQTGSSFTKEGLISDANSGGPFNSNQGLFGLNSGSGLLSGANTGGPF
ASDHQGGLISGGNSGGPFGSDPWANSNEGTYEGLIFGANSGGPFGRNQGR
FHGGGLTSGSNTGGPFANRNQLGGLIAGGNSGGPFESKEATIDHSEGGLI
EGGKIGGPLGQNPGGLVTGGNSGGPFGQAESSASFLDH
BO14151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 282 | CG30151-PA | 1..282 | 1..282 | 1509 | 100 | Plus |
glo-PA | 586 | CG6946-PA | 239..468 | 46..277 | 208 | 34.2 | Plus |
glo-PB | 586 | CG6946-PB | 239..468 | 46..277 | 208 | 34.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 28..231 | 46..277 | 199 | 35.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 308..533 | 24..277 | 197 | 33.5 | Plus |
CG17108-PA | 342 | CG17108-PA | 48..249 | 23..277 | 192 | 32.6 | Plus |
CG17108-PA | 342 | CG17108-PA | 85..326 | 28..284 | 175 | 29.9 | Plus |
CG17108-PA | 342 | CG17108-PA | 24..200 | 96..284 | 160 | 35.8 | Plus |
glo-PA | 586 | CG6946-PA | 292..472 | 30..224 | 157 | 29.9 | Plus |
glo-PB | 586 | CG6946-PB | 292..472 | 30..224 | 157 | 29.9 | Plus |