Clone BO14156 Report

Search the DGRC for BO14156

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:141
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG30373-RA
Protein status:BO14156.pep: validated full length
Sequenced Size:508

Clone Sequence Records

BO14156.3prime Sequence

506 bp (505 high quality bases) assembled on 2006-05-29

> BO14156.3prime
ATGGTCTAGAAAGCTTGCCTGGGCGGCCAACTTGGCATCCAACTGGCCCA
GATCAACGCCCAGTTCCCTGAGCCGTCTCTCCTGCTCCTTGGTGTCCAGT
CCGTGTTCCTTGTTGTACCTGTAGTTGACAGTCAGCTGCACCTCCTCCAG
ACCACTGACATGCTCGTACAAGTTGCCCTCCAACCGGAGATCGATGTCGC
TCTCCTCGCGCAGCGCACAGAAGTACAGGAGGAAGATGGCCAGGCTGGCG
GAGATTACGTAGGGTTGGTACCAAAGGGTCTCGTCGCTGCCACCACTGCG
GGTGTCCTTGGCGCGCCAAGTGGCCGCCTGGCTGCCGAAAAACTTGATGG
GCTCATCGCTGACCATGTCGTCATCCGATTTTTGGCTGGCTGCTCCTTGG
TTCTTCGCATAGAAGCGGGATGCAGGTGGAGTGGCGCCTGTCGCTGGCAT
CAGTTGGCGCAGCACCCTTGTTTTTGTAAGCAAACGCAGCATGTCGACTG
ATAACT

BO14156.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-PA 477 CG30373-RA 1..474 492..19 2370 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..652 492..19 2370 100 Minus
CG30373-RA 610 CG30373-RA 69..542 492..19 2370 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164068..8164507 19..458 2200 100 Plus
Blast to na_te.dros performed on 2015-02-02 19:58:09 has no hits.

BO14156.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:56 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-PA 1..477 18..492 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:39 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-PA 1..477 18..492 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:55:48 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 19..504 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:12:40 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 19..504 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:12:40 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8164068..8164506 19..457 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:55:48 Download gff for BO14156.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4051573..4052011 19..457 100 <- Plus

BO14156.5prime Sequence

506 bp (505 high quality bases) assembled on 2006-05-29

> BO14156.5prime
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGGCAAGCTTTC
TAGACC

BO14156.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-PA 477 CG30373-RA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..652 17..490 2370 100 Plus
CG30373-RA 610 CG30373-RA 69..542 17..490 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164068..8164507 490..51 2200 100 Minus
Blast to na_te.dros performed on 2015-02-11 13:25:01 has no hits.

BO14156.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:57 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-PA 1..477 17..491 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:40 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-PA 1..477 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:11:41 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 5..490 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:55:47 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 5..490 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:55:47 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8164068..8164506 52..490 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:11:41 Download gff for BO14156.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4051573..4052011 52..490 100 <- Minus

BO14156.complete Sequence

508 bp assembled on 2006-10-11

GenBank Submission: FJ633033

> BO14156.complete
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGGCAAGCTTTC
TAGACCAT

BO14156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 477 CG30373-PB 1..474 17..490 2370 100 Plus
CG30373-RA 477 CG30373-PA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..652 17..490 2370 100 Plus
CG30373-RA 610 CG30373-RA 69..542 17..490 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164068..8164507 490..51 2200 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:48:51 has no hits.

BO14156.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:27 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 1..477 17..491 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:33 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 53..538 5..490 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:43 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 69..542 17..492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:27 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 53..538 5..490 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:46 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 69..542 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:46 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8164066..8164506 52..492 99 <- Minus
2R 8164568..8164602 17..51 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:43 Download gff for BO14156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4052073..4052107 17..51 100   Minus
arm_2R 4051571..4052011 52..492 99 <- Minus

BO14156.pep Sequence

Translation from 16 to 508

> BO14156.pep
MLRLLTKTRVLRQLMPATGATPPASRFYAKNQGAASQKSDDDMVSDEPIK
FFGSQAATWRAKDTRSGGSDETLWYQPYVISASLAIFLLYFCALREESDI
DLRLEGNLYEHVSGLEEVQLTVNYRYNKEHGLDTKEQERRLRELGVDLGQ
LDAKLAAQASFLDH

BO14156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-PB 158 CG30373-PB 1..158 1..158 808 100 Plus
CG30373-PA 158 CG30373-PA 1..158 1..158 808 100 Plus