Clone Sequence Records
BO14156.3prime Sequence
506 bp (505 high quality bases) assembled on 2006-05-29
> BO14156.3prime
ATGGTCTAGAAAGCTTGCCTGGGCGGCCAACTTGGCATCCAACTGGCCCA
GATCAACGCCCAGTTCCCTGAGCCGTCTCTCCTGCTCCTTGGTGTCCAGT
CCGTGTTCCTTGTTGTACCTGTAGTTGACAGTCAGCTGCACCTCCTCCAG
ACCACTGACATGCTCGTACAAGTTGCCCTCCAACCGGAGATCGATGTCGC
TCTCCTCGCGCAGCGCACAGAAGTACAGGAGGAAGATGGCCAGGCTGGCG
GAGATTACGTAGGGTTGGTACCAAAGGGTCTCGTCGCTGCCACCACTGCG
GGTGTCCTTGGCGCGCCAAGTGGCCGCCTGGCTGCCGAAAAACTTGATGG
GCTCATCGCTGACCATGTCGTCATCCGATTTTTGGCTGGCTGCTCCTTGG
TTCTTCGCATAGAAGCGGGATGCAGGTGGAGTGGCGCCTGTCGCTGGCAT
CAGTTGGCGCAGCACCCTTGTTTTTGTAAGCAAACGCAGCATGTCGACTG
ATAACT
BO14156.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-PA | 477 | CG30373-RA | 1..474 | 492..19 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:58:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..652 | 492..19 | 2370 | 100 | Minus |
CG30373-RA | 610 | CG30373-RA | 69..542 | 492..19 | 2370 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:58:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164068..8164507 | 19..458 | 2200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 19:58:09 has no hits.
BO14156.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:56 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-PA | 1..477 | 18..492 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:39 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-PA | 1..477 | 18..492 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:55:48 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 19..504 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:12:40 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 19..504 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:12:40 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164068..8164506 | 19..457 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:55:48 Download gff for
BO14156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4051573..4052011 | 19..457 | 100 | <- | Plus |
BO14156.5prime Sequence
506 bp (505 high quality bases) assembled on 2006-05-29
> BO14156.5prime
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGGCAAGCTTTC
TAGACC
BO14156.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-PA | 477 | CG30373-RA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:25:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..652 | 17..490 | 2370 | 100 | Plus |
CG30373-RA | 610 | CG30373-RA | 69..542 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:25:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164068..8164507 | 490..51 | 2200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 13:25:01 has no hits.
BO14156.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:57 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-PA | 1..477 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:40 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-PA | 1..477 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:11:41 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 5..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:55:47 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 5..490 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:55:47 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164068..8164506 | 52..490 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:11:41 Download gff for
BO14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4051573..4052011 | 52..490 | 100 | <- | Minus |
BO14156.complete Sequence
508 bp assembled on 2006-10-11
GenBank Submission: FJ633033
> BO14156.complete
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGGCAAGCTTTC
TAGACCAT
BO14156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:48:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 477 | CG30373-PB | 1..474 | 17..490 | 2370 | 100 | Plus |
CG30373-RA | 477 | CG30373-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:48:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..652 | 17..490 | 2370 | 100 | Plus |
CG30373-RA | 610 | CG30373-RA | 69..542 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:48:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164068..8164507 | 490..51 | 2200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:48:51 has no hits.
BO14156.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:27 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 1..477 | 17..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:33 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 53..538 | 5..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:43 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 69..542 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:27 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 53..538 | 5..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:46 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 69..542 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:46 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164066..8164506 | 52..492 | 99 | <- | Minus |
2R | 8164568..8164602 | 17..51 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:43 Download gff for
BO14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4052073..4052107 | 17..51 | 100 | | Minus |
arm_2R | 4051571..4052011 | 52..492 | 99 | <- | Minus |
BO14156.pep Sequence
Translation from 16 to 508
> BO14156.pep
MLRLLTKTRVLRQLMPATGATPPASRFYAKNQGAASQKSDDDMVSDEPIK
FFGSQAATWRAKDTRSGGSDETLWYQPYVISASLAIFLLYFCALREESDI
DLRLEGNLYEHVSGLEEVQLTVNYRYNKEHGLDTKEQERRLRELGVDLGQ
LDAKLAAQASFLDH
BO14156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-PB | 158 | CG30373-PB | 1..158 | 1..158 | 808 | 100 | Plus |
CG30373-PA | 158 | CG30373-PA | 1..158 | 1..158 | 808 | 100 | Plus |