Clone Sequence Records
BO14157.5prime Sequence
369 bp (368 high quality bases) assembled on 2006-05-29
> BO14157.5prime
GAAGTTATCAGTCGAACATGCTACTTTTAAATAAAAACCGAGTGATTTCT
TTGGTCGTTAATTTTATTTTTCTTATCATTCTCATTTCATCGAGTGTCCA
AGCGGATGAGAGAAACATTAACAAGCTGCTGAACAACCAGGTGGTGGTCA
GCCGCCAGATTATGTGCATCCTGGGCAAGAGCGAATGCGACCAACTGGGA
CTTCAACTCAAAGCTGCCCTGCCAGAAGTTATAACCAGGAAATGCAGGAA
CTGCTCCCCACAACAGGCTCAAAAAGCGCAAAAGCTGACCACATTTCTGC
AAACTAGATACCCGGACGTATGGGCCATGCTTCTAAGGAAGTACGACAGT
GCCGCAAGCTTTCTAGACC
BO14157.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30172-PA | 339 | CG30172-RA | 1..336 | 18..353 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:04:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30172-RB | 756 | CG30172-RB | 263..598 | 18..353 | 1680 | 100 | Plus |
CG30172-RA | 431 | CG30172-RA | 38..373 | 18..353 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24030970..24031165 | 213..18 | 980 | 100 | Minus |
2R | 25286936 | 2R | 24030704..24030845 | 353..212 | 710 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 22:03:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 774..815 | 87..46 | 102 | 71.4 | Minus |
BO14157.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:19:58 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-PA | 1..339 | 18..357 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:41 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-PA | 1..339 | 18..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:53:44 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 38..376 | 18..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:53:32 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 38..376 | 18..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:53:32 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24030700..24030843 | 214..357 | 98 | <- | Minus |
2R | 24030970..24031165 | 18..213 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:53:44 Download gff for
BO14157.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19918223..19918366 | 214..357 | 98 | <- | Minus |
arm_2R | 19918493..19918688 | 18..213 | 100 | | Minus |
BO14157.complete Sequence
371 bp assembled on 2008-08-15
GenBank Submission: KX794912
> BO14157.complete
GAAGTTATCAGTCGAACATGCTACTTTTAAATAAAAACCGAGTGATTTCT
TTGGTCGTTAATTTTATTTTTCTTATCATTCTCATTTCATCGAGTGTCCA
AGCGGATGAGAGAAACATTAACAAGCTGCTGAACAACCAGGTGGTGGTCA
GCCGCCAGATTATGTGCATCCTGGGCAAGAGCGAATGCGACCAACTGGGA
CTTCAACTCAAAGCTGCCCTGCCAGAAGTTATAACCAGGAAATGCAGGAA
CTGCTCCCCACAACAGGCTCAAAAAGCGCAAAAGCTGACCACATTTCTGC
AAACTAGATACCCGGACGTATGGGCCATGCTTCTAAGGAAGTACGACAGT
GCCGCAAGCTTTCTAGACCAT
BO14157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30172-RB | 339 | CG30172-PB | 1..336 | 18..353 | 1680 | 100 | Plus |
CG30172-RA | 339 | CG30172-PA | 1..336 | 18..353 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30172-RB | 756 | CG30172-RB | 263..598 | 18..353 | 1680 | 100 | Plus |
CG30172-RA | 431 | CG30172-RA | 38..373 | 18..353 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24030970..24031165 | 213..18 | 980 | 100 | Minus |
2R | 25286936 | 2R | 24030704..24030845 | 353..212 | 710 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 774..815 | 87..46 | 102 | 71.4 | Minus |
BO14157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:35:36 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 37..375 | 18..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:11 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 37..373 | 17..355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:15 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 36..372 | 17..355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:01 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30172-RA | 37..373 | 17..355 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:01 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24030702..24030843 | 214..355 | 98 | <- | Minus |
2R | 24030970..24031165 | 17..213 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:11 Download gff for
BO14157.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19918225..19918366 | 214..355 | 98 | <- | Minus |
arm_2R | 19918493..19918688 | 17..213 | 99 | | Minus |
BO14157.pep Sequence
Translation from 17 to 371
> BO14157.pep
MLLLNKNRVISLVVNFIFLIILISSSVQADERNINKLLNNQVVVSRQIMC
ILGKSECDQLGLQLKAALPEVITRKCRNCSPQQAQKAQKLTTFLQTRYPD
VWAMLLRKYDSAASFLDH
BO14157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30172-PB | 112 | CG30172-PB | 1..112 | 1..112 | 559 | 100 | Plus |
CG30172-PA | 112 | CG30172-PA | 1..112 | 1..112 | 559 | 100 | Plus |
Phk-3-PC | 121 | CG9358-PC | 29..109 | 30..110 | 142 | 30.9 | Plus |
Phk-3-PB | 121 | CG9358-PB | 29..109 | 30..110 | 142 | 30.9 | Plus |
Phk-3-PA | 121 | CG9358-PA | 29..109 | 30..110 | 142 | 30.9 | Plus |