Clone BO14174 Report

Search the DGRC for BO14174

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:141
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG10981-RB
Protein status:BO14174.pep: Imported from assembly
Sequenced Size:970

Clone Sequence Records

BO14174.complete Sequence

970 bp assembled on 2010-07-02

GenBank Submission: KX799434

> BO14174.complete
GAAGTTATCAGTCGACATGTCAGATTCGACTATTTTCCGTTTTTCAGCGG
ACAGCAACGTATCCAGTTCGAGCTCCAATTCCAGTGTATCCGACTCTTCT
GTGGACTCCCATTCATCCATAGAATCCAATTCGGGACACAATACATCCGT
GGAATCTCAGTCATCCGCGGAATCTGATTCATCCGCTGATTCCCATTCGT
CCTTGGAACGCCCATCCCCAGTGGAGCGTGATTTATCTGTGGAATCAGAC
TCATCTTCAGCCACCAATACCAGCGAATCTTCAGTCGGAGAAGCTTCAAA
CCAACTGCAGTCACCGCAAAGCAATAACCCCTTAAATATGGCTAACTTGT
CTGTCTCGACTGAAGATGCTCATTCGCAGATCAGATCACTTACCCAGGAT
GTGATCCAGATGGAAGCAGAGTTGGATCGCATGAATCGCTACTGCGAGGA
AGTTGTGGCACAGATTGACACCTTCGCCACGAGAACCTCAACGCCAACAA
CTCGTAGAATTCGCCGCAGAACGAGTCCAGTAGAAGTGATAGATCTGTCC
CATTTGGACCGTGCACCACCTGTTCGATCCGCTCGGAATCGTGATCCCGA
TGCTTTCATCGATCTATGCACCCCCGAAGGCCCAAGAAGTCGCACAGTGA
ATCTTCACTCCAACGACTCCCTCACCATTCTGCCACGTCGGTCAGCCGAA
AATGACCCGGTAGTGGATCTCGACGTTGCGTCGCCACCAAAACGCGTTAA
TCGCGACATTGATGAGTCCCAAAAAGAGGAGTTATACAAGTGCCCCATCT
GCATGGACAGTGTATCGAAGCGCGAGCCAGTGTCAACCAAATGTGGACAC
GTCTTCTGCCGCGAATGCATCGAAACAGCCATCAGAGCTACGCACAAGTG
CCCAATATGCAACAAGAAGCTGACCGCACGTCAATTCTTTCGCATTTACT
TGGCAAGCTTTCTAGACCAT

BO14174.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RB 939 CG10981-PB 1..936 17..952 4680 100 Plus
dgrn-RA 960 CG10981-PA 49..957 44..952 4545 100 Plus
dgrn-RD 618 CG10981-PD 1..615 338..952 3075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RB 1611 CG10981-RB 335..1270 17..952 4680 100 Plus
dgrn-RA 1632 CG10981-RA 383..1291 44..952 4545 100 Plus
dgrn-RD 1635 CG10981-RD 386..1294 44..952 4545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825805..5826235 522..952 2155 100 Plus
3R 32079331 3R 5825057..5825444 44..431 1940 100 Plus
3R 32079331 3R 5825499..5825588 432..521 450 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:22:31 has no hits.

BO14174.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:25:07 Download gff for BO14174.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RB 345..1280 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:49 Download gff for BO14174.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RB 345..1280 17..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:53 Download gff for BO14174.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RB 335..1270 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:53 Download gff for BO14174.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5824949..5824975 17..43 100 -> Plus
3R 5825057..5825444 44..431 100 -> Plus
3R 5825499..5825588 432..521 100 -> Plus
3R 5825805..5826235 522..954 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:49 Download gff for BO14174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650671..1650697 17..43 100 -> Plus
arm_3R 1650779..1651166 44..431 100 -> Plus
arm_3R 1651221..1651310 432..521 100 -> Plus
arm_3R 1651527..1651957 522..954 99   Plus

BO14174.5prime Sequence

779 bp (550 high quality bases) assembled on 2010-02-20

> BO14174.5prime
TATCCAGTTCGAGCTCCAATTCCAGTGTATCCGACTCTTCTGTGGACTCC
CATTCATCCATAGAATCCAATTCGGGACACAATACATCCGTGGAATCTCA
GTCATCCGCGGAATCTGATTCATCCGCTGATTCCCATTCGTCCTTGGAAC
GCCCATCCCCAGTGGAGCGTGATTTATCTGTGGAATCAGACTCATCTTCA
GCCACCAATACCAGCGAATCTTCAGTCGGAGAAGCTTCAAACCAACTGCA
GTCACCGCAAAGCAATAACCCCTTAAATATGGCTAACTTGTCTGTCTCGA
CTGAAGATGCTCATTCGCAGATCAGATCACTTACCCAGGATGTGATCCAG
ATGGAAGCAGAGTTGGATCGCATGAATCGCTACTGCGAGGAAGTTGTGGC
ACAGATTGACACCTTCGCCACGAGAACCTCAACGCCAACAACTCGTAGAA
TTCGCCGCACAACGAGTCCAGTAGAAGTGATAGATCTGTCCCATTTGGAA
CGTGCACCACCTGTTCGATCCGCTCGGAATCGTGATCCCGATGCTTTCAT
CGATCTATGCACCCCCGAAGGCCCAAGAAGTTCCACAGTGAATCTTTCCT
CCAACGACTCCCTCACCATTCTGCCCCGTCGGTCCAGCCGAAAATGAACC
CGGTAGTGGATCTCGACGTTGCGTCCCCCCCAAACGCGTTTAATCGCCAC
TTTGATGAATCCCAAAAAAAGGAGTTATACCAGTGCCCCATCTGCTTGGG
AAGTGGACCGAAGCGGCAGCCCGTGGCAA

BO14174.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 01:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RB 1611 CG10981-RB 378..1154 1..779 3455 96.5 Plus
dgrn-RA 1632 CG10981-RA 399..1175 1..779 3455 96.5 Plus
dgrn-RD 1635 CG10981-RD 402..1178 1..779 3455 96.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 01:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825073..5825444 1..372 1860 100 Plus
3R 32079331 3R 5825805..5826119 463..779 1080 90.9 Plus
3R 32079331 3R 5825499..5825585 373..459 435 100 Plus
Blast to na_te.dros performed on 2015-01-30 01:56:12 has no hits.

BO14174.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 04:02:40 Download gff for BO14174.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-RB 388..1150 1..765 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:00:06 Download gff for BO14174.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 409..1171 1..765 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 03:56:59 Download gff for BO14174.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RD 402..1164 1..765 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 03:56:59 Download gff for BO14174.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5825073..5825444 1..372 100 -> Plus
3R 5825499..5825588 373..462 98 -> Plus
3R 5825805..5826105 463..765 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:00:06 Download gff for BO14174.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650795..1651166 1..372 100 -> Plus
arm_3R 1651221..1651310 373..462 98 -> Plus
arm_3R 1651527..1651827 463..765 92   Plus

BO14174.pep Sequence

Translation from 16 to 970

> BO14174.pep
MSDSTIFRFSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNTSVESQSS
AESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEASNQLQSP
QSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYCEEVVAQI
DTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRDPDAFIDL
CTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKRVNRDIDE
SQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNK
KLTARQFFRIYLASFLDH

BO14174.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:35:23
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-PB 312 CG10981-PB 1..312 1..312 1584 100 Plus
dgrn-PA 319 CG10981-PA 1..319 1..312 1566 97.8 Plus
dgrn-PD 205 CG10981-PD 1..205 108..312 1070 100 Plus
CG43058-PA 100 CG43058-PA 10..100 187..312 214 35.7 Plus
elfless-PC 229 CG15150-PC 42..229 149..312 183 30.7 Plus