Clone Sequence Records
BO14180.5prime Sequence
588 bp (583 high quality bases) assembled on 2006-05-29
> BO14180.5prime
GAAGTTATCAGTCGACATGGAACGTTCGCACAGCTGTAGCAATTTCGAGG
GCAGGACGGGAGCCAAGGTCATCGTTGGCGCAGTGGAGCAATTGGCCGGC
AGCAGTGAGCACCTGCCCAGCGTCCACTTTCCGCCCAGCAAGCCGCTGCG
CAGGCGCAGAAAATTGCAGCGACAGCAGAGTGCCGTCGATACGGATGACA
TGGAATATGCCGCCGATCTGGAGGAGAATGCCGATCCGGATGCACATGAG
CATATGTCGCCCGTCGTCACCATGCCCATGCGCCATATATCTGCCACCAG
TACGCGTTGCCTGCGCCACGAGGAGTCCTTTGAGTCATCCAGCACGGCGC
CCGAACTGAGTCCGCAGGCGCAGAGGCAACAGCGCTTCAGTAGTCTGCTC
CTGCGTGACAGCTCCGTATCCGTGCAGTCGGACTCGAGTCGATATTCCAG
CGTGGACAGCTTGCTGGAGGCACGCAAGCCAGATCCCGAGGCCATACTCA
TCAACCTGGGCTTTGGACCGCTCATCTCCGAGGATATGCTGTCGCGGATA
CCGCGGAGGTTTCTGAAGCCCTCGCAAGTGCCTGGCAT
BO14180.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14489-PA | 765 | olf186-M-RA | 1..572 | 17..588 | 2835 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:13:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-M-RA | 1746 | CG14489-RA | 733..1305 | 16..588 | 2850 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:13:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17847431..17848003 | 16..588 | 2850 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:13:46 has no hits.
BO14180.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:20:33 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14489-PA | 1..572 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:13:28 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14489-PA | 1..572 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:00:29 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-M-RA | 721..1305 | 6..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:48:32 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-M-RA | 721..1305 | 6..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:48:32 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17847419..17848003 | 6..588 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:00:29 Download gff for
BO14180.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13734924..13735508 | 6..588 | 99 | | Plus |
BO14180.complete Sequence
796 bp assembled on 2010-07-02
GenBank Submission: KX795791
> BO14180.complete
GAAGTTATCAGTCGACATGGAACGTTCGCACAGCTGTAGCAATTTCGAGG
GCAGGACGGGAGCCAAGGTCATCGTTGGCGCAGTGGAGCAATTGGCCGGC
AGCAGTGAGCACCTGCCCAGCGTCCACTTTCCGCCCAGCAAGCCGCTGCG
CAGGCGCAGAAAATTGCAGCGACAGCAGAGTGCCGTCGATACGGATGACA
TGGAATATGCCGCCGATCTGGAGGAGAATGCCGATCCGGATGCACATGAG
CATATGTCGCCCGTCGTCACCATGCCCATGCGCCATATATCTGCCACCAG
TACGCGTTGCCTGCGCCACGAGGAGTCCTTTGAGTCATCCAGCACGGCGC
CCGAACTGAGTCCGCAGGCGCAGAGGCAACAGCGCTTCAGTAGTCTGCTC
CTGCGTGACAGCTCCGTATCCGTGCAGTCGGACTCGAGTCGATATTCCAG
CGTGGACAGCTTGCTGGAGGCACGCAAGCCAGATCCCGAGGCCATACTCA
TCAACCTGGGCTTTGGACCGCTCAGCTCCGAGGATATGCTGTCGCGGATA
CCGCGGAGGTTTCTGAAGCCCTCGCAAGTGCCTGGCATCGATACGGATGC
CTTTGTGCAAAGACTGACTCTGGCGCGATCCCTGGCCGATTCGAGTGTTC
TGGGCTATAGGGGTCTAACCGGAAATCCGGACATGCCGCCCTCCTCAATT
GTGGCCAGCATTATGAAGCGATTCGAGGTCAATCATCATAGGAAAAACTC
CATGGGCTCCATTAAGCCCAGCATACAAGCAAGCTTTCTAGACCAT
BO14180.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-M-RA | 765 | CG14489-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-M-RA | 1746 | CG14489-RA | 733..1495 | 16..778 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17847431..17848193 | 16..778 | 3815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:22:12 has no hits.
BO14180.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:25:03 Download gff for
BO14180.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-M-RA | 732..1493 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:41 Download gff for
BO14180.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-M-RA | 734..1495 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:46 Download gff for
BO14180.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
olf186-M-RA | 734..1495 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:46 Download gff for
BO14180.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17847432..17848193 | 17..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:41 Download gff for
BO14180.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13734937..13735698 | 17..780 | 99 | | Plus |
BO14180.pep Sequence
Translation from 16 to 796
> BO14180.pep
MERSHSCSNFEGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKL
QRQQSAVDTDDMEYAADLEENADPDAHEHMSPVVTMPMRHISATSTRCLR
HEESFESSSTAPELSPQAQRQQRFSSLLLRDSSVSVQSDSSRYSSVDSLL
EARKPDPEAILINLGFGPLSSEDMLSRIPRRFLKPSQVPGIDTDAFVQRL
TLARSLADSSVLGYRGLTGNPDMPPSSIVASIMKRFEVNHHRKNSMGSIK
PSIQASFLDH
BO14180.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:35:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
olf186-M-PA | 254 | CG14489-PA | 1..254 | 1..254 | 1285 | 100 | Plus |