Clone BO14204 Report

Search the DGRC for BO14204

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG8105-RA
Protein status:BO14204.pep: validated full length
Sequenced Size:1483

Clone Sequence Records

BO14204.3prime Sequence

893 bp (834 high quality bases) assembled on 2006-05-29

> BO14204.3prime
ATGGTCTAGAAAGCTTGCGGCAATCATATCCGCATCCTTGTCCTGGTTGC
AGAGAGTGAGGCCATTGCCCAGACAGGCGGCATAGCCCATTATATGGGGC
AGCAGATTCTGCTCCATGACGCCACCGAACAGATGCGACTGCGGGCCCAT
TGCAAACACGACCACATCCTCGCCAGAATGCACGCCCTTTCTTCCATGAA
TATAGCTGGGTGTGTAGGATGTGGGACTCAATGTCTTGCTGGGACTCTCC
CGACGTCCATCCTTGTCCAGACTCTGCCACTTGCCGATGGCATAGTTGAG
GGTGCTGTATGGCACCCCGTTCACATCCCGCTGCTGTGCATCCATGCCCA
GGATGGGTGTGCCCCGCTTCGCGTATCCCGACATGCTAAGCGTATGCGAA
TGATCGGCGGTGACCACTACCAGAGTATCGCGCGGATCGGTCATCTGGAT
CACCGTCTCCACAGCCGCATCGAACTCGACCATCTCATCGAGGGCGTAGC
CCACCCGGGTTTCGTGGTGTCCATGATCAATCCGTCCGCCCTCAATGAAC
ACGAAGTAACCATTCCCATCCTCCTGAGACTTTCTCTCCAGTTTTTCAAT
GGCCGCCGCTGCCATGTCGCAGAGTCGCGGCAGCTCCTTGCTGGCGGCCA
AGTGATATGACATGTGGCTGTCGCTGAAGATACCCAGCAGTGTACCGGTA
GCATCGGTGCAGTTCCTCAGCTCTTTCAGGGATCGCGAGAAGCAGCCATT
GGGATTCGATTCACGCCACTGAGCCAGCAGATCCTTGCCATCCCGTCGCT
CATCGGCAAATTTTCCCAGACCACCGCCCAGGATGACTTTAAGATTCCGT
CCCGGCTCCTCCTCCACCAGCTGTCGCGCAATCTCCAGCTCCT

BO14204.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-PA 1452 CG8105-RA 575..1449 893..19 4325 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-RA 1569 CG8105-RA 631..1505 893..19 4345 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15588363..15589034 893..222 3330 99.7 Minus
X 23542271 X 15589099..15589301 221..19 1015 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:44:18 has no hits.

BO14204.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:20:55 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-PA 575..1452 16..893 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:00 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-PA 575..1452 16..893 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:54:58 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 631..1505 19..893 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:26 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 631..1505 19..893 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:26 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15588363..15589034 222..893 99 -> Minus
X 15589099..15589301 19..221 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:54:58 Download gff for BO14204.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15482396..15483067 222..893 99 -> Minus
arm_X 15483132..15483334 19..221 100   Minus

BO14204.5prime Sequence

880 bp (757 high quality bases) assembled on 2006-05-29

> BO14204.5prime
GAAGTTATCAGTCGACATGTTGCTCCAATTGAGGCGATTGGCGATCCTGT
TCCTGCTCCACGCTCTCATCCCCATCCTTGCGCTATCTGTTCCCATGGTG
GAGCAAGTGCAGCCGGCGGACGAGCTGCTATCGTCGCATTGGCTAAGACA
GGCGCAGTCTCAGTTGCGCGAACGTCTGGCCAGAACCAAGGACTCCATCG
CCGACGTCCGACAGGCCAAGAATGTGGTGATGCTCCTGGGCGATGGACTG
TCCATCACCACCTTAACGGCCGCTCGCATCCTAAAGGGGCAACGTCGCGG
CGGACGCGGAGAGGATGCACAGCTGGCCGTGGAACAATTCCCCTTCAGCG
GACTGAGCAAGACATACTGCATCGACGAGCAGACACCGGACTCCGCCTGC
ACGGCCACCGCCTATTTCGGCGGTGTGAAGACGCACAGCGGCACAGTGGG
TCAGAGTGGCAGTGGTGAGCGCGTGGACTCCGTACTCCAGTGGGCACAGC
GAGCGGGCAAGGCCACGGGAGTGGTGACCACCACCCGTTTGACGGACGCC
AGTCCGGCTGGTGCCTACGCCCATGTGAGCAGGCGTGGCGAGGAGCTGGA
GATTGCGCGACAGCTGGTGGAGGAGGAGCCGGGACGGAATCTTAATGTCA
TCCTGGGCGGTGGTCTGGGAAAATTTGCCGATGAGCGACGGGATGGCAAG
GATCTGCTGGCTCAGTGGCGTGAATCGAATCCCAATGGCTGCTTCTCGCG
ATCCCTGAAAGAGCTGAGGAACTGCACCGATGCTACCGGTACACTGCTGG
GTATCTTCAGCGACAGCCACATGTCATAATCACTTGGCCGCCAGCAAAGA
GCTGCCGCGACTCTGCCACATGGCAGCGGG

BO14204.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-PA 1452 CG8105-RA 1..812 17..828 4035 99.8 Plus
CG8105-PA 1452 CG8105-RA 812..862 829..879 205 96 Plus
CG1809-PA 1548 CG1809-RA 379..411 398..430 140 96.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-RA 1569 CG8105-RA 50..918 10..879 4250 99.3 Plus
CG3292-RA 1713 CG3292-RA 443..537 338..432 190 80 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:44:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15587782..15588650 10..879 4225 99.3 Plus
Blast to na_te.dros performed on 2015-02-11 09:44:05 has no hits.

BO14204.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:20:56 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-PA 1..862 17..880 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:02 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-PA 1..862 17..880 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:04:46 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 50..918 10..880 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:58:51 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 50..918 10..880 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:58:51 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15587782..15588650 10..880 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:04:46 Download gff for BO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15481815..15482683 10..880 99   Plus

BO14204.complete Sequence

1483 bp assembled on 2006-10-11

GenBank Submission: FJ633036

> BO14204.complete
GAAGTTATCAGTCGACATGTTGCTCCAATTGAGGCGATTGGCGATCCTGT
TCCTGCTCCACGCTCTCATCCCCATCCTTGCGCTATCTGTTCCCATGGTG
GAGCAAGTGCAGCCGGCGGACGAGCTGCTATCGTCGCATTGGCTAAGACA
GGCGCAGTCTCAGTTGCGCGAACGTCTGGCCAGAACCAAGGACTCCATCG
CCGACGTCCGACAGGCCAAGAATGTGGTGATGCTCCTGGGCGATGGACTG
TCCATCACCACCTTAACGGCCGCTCGCATCCTAAAGGGGCAACGTCGCGG
CGGACGCGGAGAGGATGCACAGCTGGCCGTGGAACAATTCCCCTTCAGCG
GACTGAGCAAGACATACTGCATCGACGAGCAGACACCGGACTCCGCCTGC
ACGGCCACCGCCTATTTCGGCGGTGTGAAGACGCACAGCGGCACAGTGGG
TCAGAGTGGCAGTGGTGAGCGCGTGGACTCCGTACTCCAGTGGGCACAGC
GAGCGGGCAAGGCCACGGGAGTGGTGACCACCACCCGTTTGACGGACGCC
AGTCCGGCTGGTGCCTACGCCCATGTGAGCAGGCGTGGCGAGGAGCTGGA
GATTGCGCGACAGCTGGTGGAGGAGGAGCCGGGACGGAATCTTAATGTCA
TCCTGGGCGGTGGTCTGGGAAAATTTGCCGATGAGCGACGGGATGGCAAG
GATCTGCTGGCTCAGTGGCGTGAATCGAATCCCAATGGCTGCTTCTCGCG
ATCCCTGAAAGAGCTGAGGAACTGCACCGATGCTACCGGTACACTGCTGG
GTATCTTCAGCGACAGCCACATGTCATATCACTTGGCCGCCAGCAAGGAG
CTGCCGCGACTCTGCGACATGGCAGCGGCGGCCATTGAAAAACTGGAGAG
AAAGTCTCAGGAGGATGGGAATGGTTACTTCGTGTTCATTGAGGGCGGAC
GGATTGATCATGGACACCACGAAACCCGGGTGGGCTACGCCCTCGATGAG
ATGGTCGAGTTCGATGCGGCTGTGGAGACGGTGATCCAGATGACCGATCC
GCGCGATACTCTGGTAGTGGTCACCGCCGATCATTCGCATACGCTTAGCA
TGTCGGGATACGCGAAGCGGGGCACACCCATCCTGGGCATGGATGCACAG
CAGCGGGATGTGAACGGGGTGCCATACAGCACCCTCAACTATGCCATCGG
CAAGTGGCAGAGTCTGGACAAGGATGGACGTCGGGAGAGTCCCAGCAAGA
CATTGAGTCCCACATCCTACACACCCAGCTATATTCATGGAAGAAAGGGC
GTGCATTCTGGCGAGGATGTGGTCGTGTTTGCAATGGGCCCGCAGTCGCA
TCTGTTCGGTGGCGTCATGGAGCAGAATCTGCTGCCCCATATAATGGGCT
ATGCCGCCTGTCTGGGCAATGGCCTCACTCTCTGCAACCAGGACAAGGAT
GCGGATATGATTGCCGCAAGCTTTCTAGACCAT

BO14204.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-RA 1452 CG8105-PA 1..1449 17..1465 7230 99.9 Plus
CG3292-RA 1632 CG3292-PA 400..494 338..432 190 80 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-RA 1569 CG8105-RA 50..1505 10..1465 7235 99.8 Plus
CG3292-RA 1713 CG3292-RA 443..537 338..432 190 80 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15587782..15589034 10..1262 6220 99.8 Plus
X 23542271 X 15589099..15589301 1263..1465 1015 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:05:57 has no hits.

BO14204.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:07:12 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 17..1468 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:43 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 50..1505 10..1465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:06 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 62..1505 22..1467 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:07:13 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 50..1505 10..1465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:28 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 62..1505 22..1467 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:28 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
X 15587794..15589034 22..1262 99 -> Plus
X 15589099..15589301 1263..1467 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:06 Download gff for BO14204.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15481827..15483067 22..1262 99 -> Plus
arm_X 15483132..15483334 1263..1467 99   Plus

BO14204.pep Sequence

Translation from 16 to 1483

> BO14204.pep
MLLQLRRLAILFLLHALIPILALSVPMVEQVQPADELLSSHWLRQAQSQL
RERLARTKDSIADVRQAKNVVMLLGDGLSITTLTAARILKGQRRGGRGED
AQLAVEQFPFSGLSKTYCIDEQTPDSACTATAYFGGVKTHSGTVGQSGSG
ERVDSVLQWAQRAGKATGVVTTTRLTDASPAGAYAHVSRRGEELEIARQL
VEEEPGRNLNVILGGGLGKFADERRDGKDLLAQWRESNPNGCFSRSLKEL
RNCTDATGTLLGIFSDSHMSYHLAASKELPRLCDMAAAAIEKLERKSQED
GNGYFVFIEGGRIDHGHHETRVGYALDEMVEFDAAVETVIQMTDPRDTLV
VVTADHSHTLSMSGYAKRGTPILGMDAQQRDVNGVPYSTLNYAIGKWQSL
DKDGRRESPSKTLSPTSYTPSYIHGRKGVHSGEDVVVFAMGPQSHLFGGV
MEQNLLPHIMGYAACLGNGLTLCNQDKDADMIAASFLDH

BO14204.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-PA 483 CG8105-PA 1..483 1..483 2490 100 Plus
CG3264-PB 533 CG3264-PB 52..532 29..474 1032 44.6 Plus
CG3264-PA 533 CG3264-PA 52..532 29..474 1032 44.6 Plus
CG3292-PA 543 CG3292-PA 62..542 33..476 1021 45.1 Plus
CG3290-PA 538 CG3290-PA 57..531 33..473 1020 44.8 Plus