Clone BO14207 Report

Search the DGRC for BO14207

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG16984-RA
Protein status:BO14207.pep: validated full length
Sequenced Size:955

Clone Sequence Records

BO14207.3prime Sequence

842 bp (752 high quality bases) assembled on 2006-05-29

> BO14207.3prime
ATGGTCTAGAAAGCTTGCGTACTCGGAAACATAGATAATGGGAGTGGTCT
CGATTAGCAGAATGTCCTGCTCCACCTGGCGAAGATCGGACTCCAGCTTG
CTTTTGCGCTGCCGCTTGGCGATGCTGTCGATAAGGAGCGACATCGACTG
ATACTGCTTGGTCATCTCGGTCAGGCTCAGTCGCAGTCCCTCGAGGATCT
CATTTCGCTCGGCCTGCTCCATCACCCGCATACCCGGCATTGGCGGCGGA
CCACTTGATTGGACGGATGCCCTGGTGAAACCCTTGATACCGCGGCACAG
CTCCAGCAAACGTGCCTGTTCCTTGGCACACACCGCATTCATGTCGGCCA
ACATCCTCTTGGTTTTCTTGAGGTAAACAGGCACCTTGCCGAAATCCTTG
CGGCAGATAAACTGCGGTACCAATCCGGAATTGAGTAGATCGTGACGAGC
TCCCACGGGAGTGTCTACATAACGAGGTGGCGGGGGACAGGGAACCGTTT
GTCCGGCACATATCTTGTTGCGTTTGATGAAGTTAGGTACCATTGCCGGC
TTTTTGCCGCCACTGCCCGGTGGTGGTAGTGGGGGCATTGGCGGCATCTT
GGGACACTTGTGGGTGTTCTCTCGCCGCCATTTGATGCCCTGGCTCTTGC
GCAAATAGGCGCACGGTGGGTCAATCGGAGTGTGAGCACAGCCCATGGTG
CGGTGGGCTGATTTCTTGGCCTCTGTCAGGACGCGGGTTCCATCGTTCTG
GAGGATAATCGATAGCTTCTTGTCCTCCTCGTTAAAGCGTTCGCGAAGTC
TCTTGGCATACTTGGCTGCCCTCTCCACAACAAGATTTTTGT

BO14207.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-PA 924 CG16984-RA 98..921 842..19 4095 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-RA 1162 CG16984-RA 187..1010 842..19 4105 99.9 Minus
CG12182-RC 3493 CG12182-RC 2489..3302 19..832 4070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:39:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2596033..2596846 832..19 4070 100 Minus
Blast to na_te.dros performed on 2015-02-12 18:39:20 has no hits.

BO14207.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:01 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-PA 98..924 15..842 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:09 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-PA 98..924 15..842 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:56:13 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 187..1013 15..842 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:20:28 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 187..1013 15..842 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:20:28 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2596033..2596849 15..832 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:56:13 Download gff for BO14207.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2596033..2596849 15..832 99   Minus

BO14207.5prime Sequence

876 bp (796 high quality bases) assembled on 2006-05-29

> BO14207.5prime
GAAGTTATCAGTCGACATGTCCCTGGTTTATATCACCCATCACGATGAGA
ATATTCTCGAGTGCGAGCAGGACTTTGTGAAGGCCCAAGGACCTAAGGAA
TCAATTTTTGTCTACAAAAATCCTGTTGTGGAGAGGGCAGCCAAGTATGC
CAAGAGACTTCGCGAACGCTTTAACGAGGAGGACAAGAAGCTATCGATTA
TCCTCCAGAACGATGGAACCCGCGTCCTGACAGAGGCCAAGAAATCAGCC
CACCGCACCATGGGCTGTGCTCACACTCCGATTGACCCACCGTGCGCCTA
TTTGCGCAAGAGCCAGGGCATCAAATGGCGGCGAGAGAACACCCACAAGT
GTCCCAAGATGCCGCCAATGCCCCCACTACCACCACCGGGCAGTGGCGGC
AAAAAGCCGGCAATGGTACCTAACTTCATCAAACGCAACAAGATATGTGC
CGGACAAACGGTTCCCTGTCCCCCGCCACCTCGTTATGTAGACACTCCCG
TGGGAGCTCGTCACGATCTACTCAATTCCGGATTGGTACCGCAGTTTATC
TGCCGCAAGGATTTCGGCAAGGTGCCTGTTTACCTCAAGAAAACCAAGAG
GATGTTGGCCGACATGAATGCGGTGTGTGCCAAGGAACAGGCACGTTTGC
TGGAGCTGTGCCGCGGTATCAAGGGTTTCACCAGGGCATCCGTCCAATCA
AGTGGTCCGCCGCCAATGCCGGGTATGCGGGTGATGGAGCAGGCCGAGCG
AAATGAGATCCTCGAGGGACTGCGACTGAGCCTGACCGAGATGACCAAGC
AGTATCAGTCGATGTCGCTCCTTATCGACAGCATCGCCCAGCGGCAGCGC
AAAAGCAAGCTGGAGTCCGATCTTCG

BO14207.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-PA 924 CG16984-RA 1..860 17..876 4275 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-RA 1162 CG16984-RA 90..949 17..876 4285 99.9 Plus
CG12182-RC 3493 CG12182-RC 2550..3303 876..123 3755 99.9 Minus
CG12182-RC 3493 CG12182-RC 3360..3465 122..17 530 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2596032..2596785 123..876 3755 99.9 Plus
3L 28110227 3L 2595870..2595975 17..122 530 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:32:04 has no hits.

BO14207.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:02 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-PA 1..860 17..876 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:10 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-PA 1..860 17..876 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:31:54 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 90..949 17..876 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:30:19 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 90..949 17..876 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:30:19 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2595870..2595975 17..122 100 -> Plus
3L 2596032..2596785 123..876 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:31:54 Download gff for BO14207.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2595870..2595975 17..122 100 -> Plus
arm_3L 2596032..2596785 123..876 99   Plus

BO14207.complete Sequence

955 bp assembled on 2006-10-11

GenBank Submission: FJ633038

> BO14207.complete
GAAGTTATCAGTCGACATGTCCCTGGTTTATATCACCCATCACGATGAGA
ATATTCTCGAGTGCGAGCAGGACTTTGTGAAGGCCCAAGGACCTAAGGAA
TCAATTTTTGTCTACAAAAATCCTGTTGTGGAGAGGGCAGCCAAGTATGC
CAAGAGACTTCGCGAACGCTTTAACGAGGAGGACAAGAAGCTATCGATTA
TCCTCCAGAACGATGGAACCCGCGTCCTGACAGAGGCCAAGAAATCAGCC
CACCGCACCATGGGCTGTGCTCACACTCCGATTGACCCACCGTGCGCCTA
TTTGCGCAAGAGCCAGGGCATCAAATGGCGGCGAGAGAACACCCACAAGT
GTCCCAAGATGCCGCCAATGCCCCCACTACCACCACCGGGCAGTGGCGGC
AAAAAGCCGGCAATGGTACCTAACTTCATCAAACGCAACAAGATATGTGC
CGGACAAACGGTTCCCTGTCCCCCGCCACCTCGTTATGTAGACACTCCCG
TGGGAGCTCGTCACGATCTACTCAATTCCGGATTGGTACCGCAGTTTATC
TGCCGCAAGGATTTCGGCAAGGTGCCTGTTTACCTCAAGAAAACCAAGAG
GATGTTGGCCGACATGAATGCGGTGTGTGCCAAGGAACAGGCACGTTTGC
TGGAGCTGTGCCGCGGTATCAAGGGTTTCACCAGGGCATCCGTCCAATCA
AGTGGTCCGCCGCCAATGCCGGGTATGCGGGTGATGGAGCAGGCCGAGCG
AAATGAGATCCTCGAGGGACTGCGACTGAGCCTGACCGAGATGACCAAGC
AGTATCAGTCGATGTCGCTCCTTATCGACAGCATCGCCAAGCGGCAGCGC
AAAAGCAAGCTGGAGTCCGATCTTCGCCAGGTGGAGCAGGACATTCTGCT
AATCGAGACCACTCCCATTATCTATGTTTCCGAGTACGCAAGCTTTCTAG
ACCAT

BO14207.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-RA 924 CG16984-PA 1..921 17..937 4605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-RA 1162 CG16984-RA 90..1010 17..937 4605 100 Plus
CG12182-RC 3493 CG12182-RC 2489..3303 937..123 4075 100 Minus
CG12182-RC 3493 CG12182-RC 3360..3465 122..17 530 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2596032..2596846 123..937 4075 100 Plus
3L 28110227 3L 2595870..2595975 17..122 530 100 Plus
Blast to na_te.dros performed on 2014-11-27 17:00:47 has no hits.

BO14207.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:07:20 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 17..941 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:46 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 58..981 17..941 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:08 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 90..1010 17..939 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:07:21 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 58..981 17..941 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:32:23 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 90..1010 17..939 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:32:23 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2595870..2595975 17..122 100 -> Plus
3L 2596032..2596846 123..939 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:08 Download gff for BO14207.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2595870..2595975 17..122 100 -> Plus
arm_3L 2596032..2596846 123..939 99   Plus

BO14207.pep Sequence

Translation from 16 to 955

> BO14207.pep
MSLVYITHHDENILECEQDFVKAQGPKESIFVYKNPVVERAAKYAKRLRE
RFNEEDKKLSIILQNDGTRVLTEAKKSAHRTMGCAHTPIDPPCAYLRKSQ
GIKWRRENTHKCPKMPPMPPLPPPGSGGKKPAMVPNFIKRNKICAGQTVP
CPPPPRYVDTPVGARHDLLNSGLVPQFICRKDFGKVPVYLKKTKRMLADM
NAVCAKEQARLLELCRGIKGFTRASVQSSGPPPMPGMRVMEQAERNEILE
GLRLSLTEMTKQYQSMSLLIDSIAKRQRKSKLESDLRQVEQDILLIETTP
IIYVSEYASFLDH

BO14207.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-PA 307 CG16984-PA 1..307 1..307 1617 100 Plus