Clone BO14221 Report

Search the DGRC for BO14221

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG11601-RA
Protein status:BO14221.pep: validated full length
Sequenced Size:859

Clone Sequence Records

BO14221.3prime Sequence

857 bp (851 high quality bases) assembled on 2006-05-29

> BO14221.3prime
ATGGTCTAGAAAGCTTGCGCCTTGCTTTAATTTCTGTTGATTTAGGAGCT
TAAACTCCGGACCCCAAACGACGTTGTTGGCGAACTCCCCGAGCAGATAG
CAAACCAGGTTGAACCCCACAAGTAGTGCCAAGAACACGTAGCGCAGGTA
TGCGGGCAGCACTTCCAGAATGGGATACACCCACTCGCCACTGAAGTAGC
GAACAATGTGCAGCCAGATGATGTAAAGCAGGATGAAGGAGACGTTGCCC
GTGATGCCTGCCAATCGACTCGGATAGCGGCGGAAGCAGGTAAACAGGTC
CATAATGGCCAAAAGGGCCACATTCGTGTGTACCACGTGATTCAACCAGC
TGGGGAAAATCGCATCCAGCGCTGAGGGAAAGATGAGCTCACGGTCCCAC
ACGTAGATGACCCAAAACGAGAGGCAGACATTGTGGGCGACAGGAAAGGC
AAAGGCGGCGAACACATAGTCCCTCACCGATCGCAACATGGATTTTGAAT
CCCCGGAGACATTGTTATCGCCGAAGAGATCGTTCAGCAGAGCCAATGAG
TGGTAGATGGCCTGTAGAATGACGTCCAAGAAGGTAAGGTACTTGAACTT
GCCGCCCCACCGCGCCTTCAGTTCATCCTCGTCTAGCAAATCCGTGGGCC
AATGCACCCGGAAGTAGTGAAAGTATATCCCATACGAAAACTGCGCTGCC
GCCAGGAGATGGACCAGGAATCTCAGGTATTTGAAGGCACCGCTCGTATA
GGCATCGTTGCAAGTGTTCAACTGGGCTTTAGTGGCCTCGACAGCTTCCT
TGGCGGCGTTGAACTCGCGCACCTGCTTCTTGCTCTTGCCCATGTCGACT
GATAACT

BO14221.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-PA 828 CG11601-RA 1..825 843..19 4125 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-RC 1378 CG11601-RC 49..873 843..19 4125 100 Minus
CG11601-RB 1077 CG11601-RB 49..873 843..19 4125 100 Minus
CG11601-RA 1151 CG11601-RA 123..947 843..19 4125 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:40:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 282654..283147 350..843 2470 100 Plus
2L 23513712 2L 282175..282508 19..352 1670 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:40:36 has no hits.

BO14221.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:20 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-PA 1..828 18..843 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:36 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-PA 1..828 18..843 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:54:47 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 118..947 19..850 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:01 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 118..947 19..850 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:01 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 282175..282505 19..349 100 <- Plus
2L 282654..283152 350..850 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:54:47 Download gff for BO14221.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 282175..282505 19..349 100 <- Plus
arm_2L 282654..283152 350..850 99   Plus

BO14221.5prime Sequence

792 bp (790 high quality bases) assembled on 2006-05-29

> BO14221.5prime
GAAGTTATCAGTCGACATGGGCAAGAGCAAGAAGCAGGTGCGCGAGTTCA
ACGCCGCCAAGGAAGCTGTCGAGGCCACTAAAGCCCAGTTGAACACTTGC
AACGATGCCTATACGAGCGGTGCCTTCAAATACCTGAGATTCCTGGTCCA
TCTCCTGGCGGCAGCGCAGTTTTCGTATGGGATATACTTTCACTACTTCC
GGGTGCATTGGCCCACGGATTTGCTAGACGAGGATGAACTGAAGGCGCGG
TGGGGCGGCAAGTTCAAGTACCTTACCTTCTTGGACGTCATTCTACAGGC
CATCTACCACTCATTGGCTCTGCTGAACGATCTCTTCGGCGATAACAATG
TCTCCGGGGATTCAAAATCCATGTTGCGATCGGTGAGGGACTATGTGTTC
GCCGCCTTTGCCTTTCCTGTCGCCCACAATGTCTGCCTCTCGTTTTGGGT
CATCTACGTGTGGGACCGTGAGCTCATCTTTCCCTCAGCGCTGGATGCGA
TTTTCCCCAGCTGGTTGAATCACGTGGTACACACGAATGTGGCCCTTTTG
GCCATTATGGACCTGTTTACCTGCTTCCGCCGCTATCCGAGTCGATTGGC
AGGCATCACGGGCAACGTCTCCTTCATCCTGCTTTACATCATCTGGCTGC
ACATTGTTCGCTACTTCAGTGGCGAGTGGGTGTATCCCATTCTGGAAGTG
CTGCCCGCATACCTGCGCTACGTGTTCTTGGCACTACTTGTGGGGTTCAA
CCTGGTTTGCTATCTGCTCGGGGAGTTCGCCAACAACGTCGT

BO14221.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-PA 828 CG11601-RA 1..776 17..792 3880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-RC 1378 CG11601-RC 49..824 17..792 3880 100 Plus
CG11601-RB 1077 CG11601-RB 49..824 17..792 3880 100 Plus
CG11601-RA 1151 CG11601-RA 123..898 17..792 3880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 282654..283147 510..17 2470 100 Minus
2L 23513712 2L 282224..282508 792..508 1425 100 Minus
Blast to na_te.dros performed on 2015-02-12 12:53:56 has no hits.

BO14221.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:21 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:37 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:12:46 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 118..898 10..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:36:44 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 118..898 10..792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:36:44 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 282224..282505 511..792 100 <- Minus
2L 282654..283152 10..510 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:12:46 Download gff for BO14221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 282224..282505 511..792 100 <- Minus
arm_2L 282654..283152 10..510 99   Minus

BO14221.complete Sequence

859 bp assembled on 2006-10-11

GenBank Submission: FJ633043

> BO14221.complete
GAAGTTATCAGTCGACATGGGCAAGAGCAAGAAGCAGGTGCGCGAGTTCA
ACGCCGCCAAGGAAGCTGTCGAGGCCACTAAAGCCCAGTTGAACACTTGC
AACGATGCCTATACGAGCGGTGCCTTCAAATACCTGAGATTCCTGGTCCA
TCTCCTGGCGGCAGCGCAGTTTTCGTATGGGATATACTTTCACTACTTCC
GGGTGCATTGGCCCACGGATTTGCTAGACGAGGATGAACTGAAGGCGCGG
TGGGGCGGCAAGTTCAAGTACCTTACCTTCTTGGACGTCATTCTACAGGC
CATCTACCACTCATTGGCTCTGCTGAACGATCTCTTCGGCGATAACAATG
TCTCCGGGGATTCAAAATCCATGTTGCGATCGGTGAGGGACTATGTGTTC
GCCGCCTTTGCCTTTCCTGTCGCCCACAATGTCTGCCTCTCGTTTTGGGT
CATCTACGTGTGGGACCGTGAGCTCATCTTTCCCTCAGCGCTGGATGCGA
TTTTCCCCAGCTGGTTGAATCACGTGGTACACACGAATGTGGCCCTTTTG
GCCATTATGGACCTGTTTACCTGCTTCCGCCGCTATCCGAGTCGATTGGC
AGGCATCACGGGCAACGTCTCCTTCATCCTGCTTTACATCATCTGGCTGC
ACATTGTTCGCTACTTCAGTGGCGAGTGGGTGTATCCCATTCTGGAAGTG
CTGCCCGCATACCTGCGCTACGTGTTCTTGGCACTACTTGTGGGGTTCAA
CCTGGTTTGCTATCTGCTCGGGGAGTTCGCCAACAACGTCGTTTGGGGTC
CGGAGTTTAAGCTCCTAAATCAACAGAAATTAAAGCAAGGCGCAAGCTTT
CTAGACCAT

BO14221.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:44:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-RC 828 CG11601-PC 1..825 17..841 4125 100 Plus
CG11601-RB 828 CG11601-PB 1..825 17..841 4125 100 Plus
CG11601-RA 828 CG11601-PA 1..825 17..841 4125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-RC 1378 CG11601-RC 49..873 17..841 4125 100 Plus
CG11601-RB 1077 CG11601-RB 49..873 17..841 4125 100 Plus
CG11601-RA 1151 CG11601-RA 123..947 17..841 4125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 282654..283147 510..17 2470 100 Minus
2L 23513712 2L 282175..282508 841..508 1670 100 Minus
Blast to na_te.dros performed on 2014-11-27 19:44:50 has no hits.

BO14221.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:01 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 1..828 17..842 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:12 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 130..959 10..841 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:48 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 123..947 17..843 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:01 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 130..959 10..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:33 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11601-RA 123..947 17..843 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:33 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
2L 282173..282505 511..843 99 <- Minus
2L 282654..283147 17..510 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:48 Download gff for BO14221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 282173..282505 511..843 99 <- Minus
arm_2L 282654..283147 17..510 100   Minus

BO14221.pep Sequence

Translation from 16 to 859

> BO14221.pep
MGKSKKQVREFNAAKEAVEATKAQLNTCNDAYTSGAFKYLRFLVHLLAAA
QFSYGIYFHYFRVHWPTDLLDEDELKARWGGKFKYLTFLDVILQAIYHSL
ALLNDLFGDNNVSGDSKSMLRSVRDYVFAAFAFPVAHNVCLSFWVIYVWD
RELIFPSALDAIFPSWLNHVVHTNVALLAIMDLFTCFRRYPSRLAGITGN
VSFILLYIIWLHIVRYFSGEWVYPILEVLPAYLRYVFLALLVGFNLVCYL
LGEFANNVVWGPEFKLLNQQKLKQGASFLDH

BO14221.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11601-PC 275 CG11601-PC 1..275 1..275 1459 100 Plus
CG11601-PB 275 CG11601-PB 1..275 1..275 1459 100 Plus
CG11601-PA 275 CG11601-PA 1..275 1..275 1459 100 Plus
CG3625-PB 248 CG3625-PB 7..246 29..270 638 48.4 Plus
CG3625-PA 245 CG3625-PA 8..243 26..270 572 42.9 Plus