Clone Sequence Records
BO14222.3prime Sequence
783 bp (766 high quality bases) assembled on 2006-05-29
> BO14222.3prime
ATGGTCTAGAAAGCTTGCTTTCTTATCGCCACCCTTGGCGGCAAGCTCCT
TCATTAGATTCAAGGCACTTCCAGCCTGGAACCACTGGATCTGCAGCTCA
TTAAGGGTGTGGTTCAACTGGATTTTGTCGGAGCTACCATTATTCTTGAT
CTCAGCATCCACAGGCTTGCCAGGTGCCAAGTCCTTGAGGTTCAGTATCG
AAATCTTGCTCGACGGCTGAACTTTGTCGTAGTCACCGGGATTGGCGAAT
GTCAAGGCGAGCATACCCTGTTTCTTTAGGTTCGTCTCGTGGATGCGGGC
GAACGACTTGACGATAATGGCCACTCCGCCCAAGTGTCGAGGTTCCAGGG
CAGCGTGCTCCCTGGATGATCCCTCGCCGTAGTTCTCCTCACCCACAGCA
CACCACTTGATCTTGTTGGCCTTGTAATCGCGTGCCACCGCTGGTACGGC
GTCAAAACTGCCTGTCTTCTGGTTTTTGACCTTGTTCATTTCATTGTTTT
CGGCATTTGTTGCCCCAATGAACATGTTATTTGATATATTATCCAAATGA
CCGCGATACTTAAGCCAGGGTCCAGCGGCACTGATGTGATCGGTGGTGCA
TTTGCCTTTGATTTTGATAAGCACCATCAAATCAATGTAGTCCTTGCCGT
CCCATTTCTCAAAAGGTTCGAGCAGTTGCAGGCGATCCGACTTGGGATCG
ACATTGACCTTGATATCATCTGCTTTCGCTGGGGGAGCCTGATAGGTATC
CTCTCCGGGATCAAAACCCTTGGATGGCAGCTC
BO14222.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 2352 | CG4706-RA | 1585..2349 | 783..19 | 3800 | 99.8 | Minus |
| CG9244-PB | 2364 | Acon-RB | 2077..2133 | 321..265 | 185 | 92.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:10:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 1660..2424 | 783..19 | 3810 | 99.9 | Minus |
| Acon-RF | 3102 | CG9244-RF | 1817..2560 | 783..40 | 750 | 74.6 | Minus |
| Acon-RE | 3022 | CG9244-RE | 1736..2479 | 783..40 | 750 | 74.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:10:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11138836..11139600 | 783..19 | 3810 | 99.9 | Minus |
| 2L | 23513712 | 2L | 21171908..21172401 | 713..220 | 595 | 74.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:10:11 has no hits.
BO14222.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:22 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1585..2352 | 18..783 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:38 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1585..2352 | 18..783 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:10:51 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 1660..2429 | 11..783 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:59 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 1660..2429 | 11..783 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:59 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11138836..11139605 | 11..783 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:10:51 Download gff for
BO14222.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6964558..6965327 | 11..783 | 99 | <- | Minus |
BO14222.5prime Sequence
810 bp (759 high quality bases) assembled on 2006-05-29
> BO14222.5prime
GAAGTTATCAGTCGACATGGCTCAACGAACACATAGATATATATGTTTGG
CGGGTTCCATGGTGCGAAACTTTCACACGGCGCGTTTTCCACGATGTGAT
AAAGTGGCAATGTCAAATTTTGATACCGGAATTCCCTTGCCCTATAAGAA
GTTGAGGGAAAACCTGGATTGCATCAAGGGTCGACTGGGTGGACCGCTAA
CCTTGTCGGAGAAGGTGTTATATTCCCATTTGGATCAACCGGATTCACAG
GAAATCGAACGAGGCAAGTCCTATTTGCGATTGCGACCAGATCGCGTTGC
CCTGCAGGATGCGACTGCCCAGATGACGCTACTGCAGTTCATTTCGTCGG
GCCTGAAGAAGGTAGCAGTTCCATCCACCGTCCACTGTGATCACTTAATT
GAGGCCCAGATCAGTGGCGATAAGGACTTGGCCAGGGCTAAGGATCTGAA
CAAGGAGGTGTACGATTTTCTGTCCTCGGCGTGTGCCAAGTATAACTTGG
GTTTCTGGAAGCCTGGCAGCGGCATAATTCATCAGATCATTTTAGAGAAC
TATGCATTTCCCGGACTACTGATGATCGGAACTGATTCCCATACTCCGAA
TGGCGGCGGACTGGGTTGCCTGTGCGTTGGAGTTGGTGGTGCAGATGCCG
TCGATGTGATGGCGAATATACCGTGGGAACTCAAGTGCCCGACCGTGATT
GGATGCCATCTCACGGGTAAGATCAGTGGGTGGACTTCGCCCAAGGATGT
CATCCTTAAAGTGGCCGAGATTCTGACCGTTAAAGGAGGTACGGGTGCCA
TTGTGGAGTA
BO14222.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 2352 | CG4706-RA | 1..794 | 17..810 | 3895 | 99.6 | Plus |
| CG9244-PB | 2364 | Acon-RB | 623..674 | 612..663 | 160 | 92.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:28:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 76..869 | 17..810 | 3925 | 99.6 | Plus |
| Acon-RF | 3102 | CG9244-RF | 503..1014 | 290..801 | 925 | 78.9 | Plus |
| Acon-RE | 3022 | CG9244-RE | 422..933 | 290..801 | 925 | 78.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11137252..11138045 | 17..810 | 3925 | 99.6 | Plus |
| 2L | 23513712 | 2L | 21170458..21170969 | 290..801 | 925 | 78.7 | Plus |
Blast to na_te.dros performed on 2015-02-02 08:28:36 has no hits.
BO14222.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:23 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1..793 | 17..809 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:40 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1..793 | 17..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:29 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..868 | 9..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:20:51 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..868 | 9..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:20:51 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11137245..11138044 | 9..809 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:29 Download gff for
BO14222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6962967..6963766 | 9..809 | 99 | | Plus |
BO14222.complete Sequence
2383 bp assembled on 2008-11-10
GenBank Submission: KX796805
> BO14222.complete
GAAGTTATCAGTCGACATGGCTCAACGAACACATAGATATATATGTTTGG
CGGGTTCCATGGTGCGAAACTTTCACACGGCGCGTTTTCCACGATGTGAT
AAAGTGGCAATGTCAAATTTTGATACCGGAATTCCCTTGCCCTATAAGAA
GTTGAGGGAAAACCTGGATTGCATCAAGGGTCGACTGGGTGGACCGCTAA
CCTTGTCGGAGAAGGTGTTATATTCCCATTTGGATCAACCGGATTCACAG
GAAATCGAACGAGGCAAGTCCTATTTGCGATTGCGACCAGATCGCGTTGC
CCTGCAGGATGCGACTGCCCAGATGACGCTACTGCAGTTCATTTCGTCGG
GCCTGAAGAAGGTAGCAGTTCCATCCACCGTCCACTGTGATCACTTAATT
GAGGCCCAGATCAGTGGCGATAAGGACTTGGCCAGGGCTAAGGATCTGAA
CAAGGAGGTGTACGATTTTCTGTCCTCGGCGTGTGCCAAGTATAACTTGG
GTTTCTGGAAGCCTGGCAGCGGCATAATTCATCAGATCATTTTAGAGAAC
TATGCATTTCCCGGACTACTGATGATCGGAACTGATTCCCATACTCCGAA
TGGCGGCGGACTGGGTTGCCTGTGCGTTGGAGTTGGTGGTGCAGATGCCG
TCGATGTGATGGCGAATATACCGTGGGAACTCAAGTGCCCGACCGTGATT
GGATGCCATCTCACGGGTAAGATCAGTGGGTGGACTTCGCCCAAGGATGT
CATCCTTAAAGTGGCCGAGATTCTGACCGTTAAAGGAGGTACGGGTGCCA
TTGTGGAGTACCATGGTCCTGGTGTCGAATCTATTTCCTGCACAGGCATG
GCTACTATTACCAACATGGGTGCTGAAATCGGTGCCACAACTTCAATATT
TCCATTCAACGAACGCATGGTCACATATTTGCGTGCAACCGGTAGAGGTG
CCATCGCTGATGAGGCCACAAAGAATAAAGATCTTTTGGTTCCGGATGAG
GGTTGCAAATACGATAAGGTGATCGAGATCAATTTGGACACCTTGGAACC
GCTGGTGAATGGCCCCTTCACTCCCGATTTGGCCCATCCCATTAGTAAAC
TGGGTCAGAACTCCGAGAAGAATGGCTATCCGATGGAAATCAAAGTGAGT
CTAATTGGTTCCTGCACGAACTCCTCCTACGAGGACATGGGACGATGTGC
CAGCATAGCCAATGACGCACTGGGTCATGGCCTAAAATCGTGCGTTCCAT
TTAATGTTACCCCGGGATCGGAGCAAGTTCGAGCTACAATCGCACGGGAC
GGCATTATAGATGTGCTTGAGAAGTTTGGAGGCACCGTGCTGGCGAATGC
CTGTGGTCCCTGCATTGGACAGTGGGATCGCAAGGATGTAAAGATGGGAG
AGAAGAACACCATTGTCACGTCGTATAATCGCAACTTCACCGGTCGAAAT
GATGCCAATCCAGCAACACATTGTTTTGTTACGAGTCCAGAAATGGCAAC
TGCATTGGCTATCGCCGGACGTTTGGATTTCAATCCGATGACGGATGAGC
TTACGGGTACCGATGGCAAAACGTTCAAGCTCAAGGAACCGCACGGCGAA
GAGCTGCCATCCAAGGGTTTTGATCCCGGAGAGGATACCTATCAGGCTCC
CCCAGCGAAAGCAGATGATATCAAGGTCAATGTCGATCCCAAGTCGGATC
GCCTGCAACTGCTCGAACCTTTTGAGAAATGGGACGGCAAGGACTACATT
GATTTGATGGTGCTTATCAAAATCAAAGGCAAATGCACCACCGATCACAT
CAGTGCCGCTGGACCCTGGCTTAAGTATCGCGGTCATTTGGATAATATAT
CAAATAACATGTTCATTGGGGCAACAAATGCCGAAAACAATGAAATGAAC
AAGGTCAAAAACCAGAAGACAGGCAGTTTTGACGCCGTACCAGCGGTGGC
ACGCGATTACAAGGCCAACAAGATCAAGTGGTGTGCTGTGGGTGAGGAGA
ACTACGGCGAGGGATCATCCAGGGAGCACGCTGCCCTGGAACCTCGACAC
TTGGGCGGAGTGGCCATTATCGTCAAGTCGTTCGCCCGCATCCACGAGAC
GAACCTAAAGAAACAGGGTATGCTCGCCTTGACATTCGCCAATCCCGGTG
ACTACGACAAAGTTCAGCCGTCGAGCAAGATTTCGATACTGAACCTCAAG
GACTTGGCACCTGGCAAGCCTGTGGATGCTGAGATCAAGAATAATGGTAG
CTCCGACAAAATCCAGTTGAACCACACCCTTAATGAGCTGCAGATCCAGT
GGTTCCAGGCTGGAAGTGCCTTGAATCTAATGAAGGAGCTTGCCGCCAAG
GGTGGCGATAAGAAAGCAAGCTTTCTAGACCAT
BO14222.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2352 | CG4706-PA | 1..2349 | 17..2365 | 11670 | 99.8 | Plus |
| Acon-RF | 2364 | CG9244-PF | 1024..2358 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RE | 2364 | CG9244-PE | 1024..2358 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RF | 2364 | CG9244-PF | 301..931 | 290..920 | 1055 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 76..2424 | 17..2365 | 11670 | 99.8 | Plus |
| Acon-RF | 3102 | CG9244-RF | 1226..2560 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RE | 3022 | CG9244-RE | 1145..2479 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RF | 3102 | CG9244-RF | 503..1133 | 290..920 | 1055 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11137252..11139600 | 17..2365 | 11670 | 99.8 | Plus |
| 2L | 23513712 | 2L | 21170458..21171088 | 290..920 | 1055 | 77.8 | Plus |
| 2L | 23513712 | 2L | 21171181..21171825 | 1010..1654 | 930 | 76.3 | Plus |
| 2L | 23513712 | 2L | 21171908..21172401 | 1671..2164 | 595 | 74.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:23:50 has no hits.
BO14222.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:16:14 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..2429 | 9..2373 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:40 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2424 | 17..2367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:08:35 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2424 | 17..2367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:03 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2424 | 17..2367 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:03 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11137252..11139600 | 17..2367 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:40 Download gff for
BO14222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6962974..6965322 | 17..2367 | 99 | | Plus |
BO14222.pep Sequence
Translation from 16 to 2383
> BO14222.pep
MAQRTHRYICLAGSMVRNFHTARFPRCDKVAMSNFDTGIPLPYKKLRENL
DCIKGRLGGPLTLSEKVLYSHLDQPDSQEIERGKSYLRLRPDRVALQDAT
AQMTLLQFISSGLKKVAVPSTVHCDHLIEAQISGDKDLARAKDLNKEVYD
FLSSACAKYNLGFWKPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLG
CLCVGVGGADAVDVMANIPWELKCPTVIGCHLTGKISGWTSPKDVILKVA
EILTVKGGTGAIVEYHGPGVESISCTGMATITNMGAEIGATTSIFPFNER
MVTYLRATGRGAIADEATKNKDLLVPDEGCKYDKVIEINLDTLEPLVNGP
FTPDLAHPISKLGQNSEKNGYPMEIKVSLIGSCTNSSYEDMGRCASIAND
ALGHGLKSCVPFNVTPGSEQVRATIARDGIIDVLEKFGGTVLANACGPCI
GQWDRKDVKMGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEMATALAIA
GRLDFNPMTDELTGTDGKTFKLKEPHGEELPSKGFDPGEDTYQAPPAKAD
DIKVNVDPKSDRLQLLEPFEKWDGKDYIDLMVLIKIKGKCTTDHISAAGP
WLKYRGHLDNISNNMFIGATNAENNEMNKVKNQKTGSFDAVPAVARDYKA
NKIKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQ
GMLALTFANPGDYDKVQPSSKISILNLKDLAPGKPVDAEIKNNGSSDKIQ
LNHTLNELQIQWFQAGSALNLMKELAAKGGDKKASFLDH
BO14222.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 783 | CG4706-PA | 1..783 | 1..783 | 4138 | 100 | Plus |
| Acon-PF | 787 | CG9244-PF | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PE | 787 | CG9244-PE | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PD | 787 | CG9244-PD | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PB | 787 | CG9244-PB | 14..786 | 4..776 | 3285 | 79.3 | Plus |
