Clone Sequence Records
BO14229.3prime Sequence
867 bp (718 high quality bases) assembled on 2006-05-29
> BO14229.3prime
ATGGTCTAGAAAGCTTGCGGCTGCTGGCGGTGCCGGAGTCTCGGCTGCTG
CGGCGGCGGGTGCTTCTGCTCCTGGCGCGGGAGTGGGTGCGGGCGTGGCT
CCGTCGGCGGCAGGAGTGGCGGCACCTTCGGCAGCTGGAGCTGCTCCGGC
GGGTGCGGCTCCTTCTGCTGCTGGAGAAACAGCTTCAGCTCCGGCGGCAG
GGGTGGCAGTTGCGCCCGGCTCACCAGTTCCGCCAACGGTATTTGTTTCT
TCCGCTCCCGGTGTCACCGAGACGCCATTCTGACCAGGTTGATCGTCATC
GGGCACGTCGAGCGCCCCGACTGCATCCTCCGAGTCCGGCTCCGGGTGCT
CCACTGAGCCACTGGCAATGGGGTCCTGGCGGTCGTGGTCGCCATCGCCA
TCGCCATCGTCCTCTCCTTCGGCACTTCCGCCAATGTCGTGGTGGAAGTG
ATGCAAGTGCTCGTGACTGTGGTGCTTCGGCTTCTTGCCACTATCCGTGC
CCTGGCAGTAGCGTTCCGAGCAGATGAAGTATTGCCGCTCGTGGCAGTTG
TCTGCCGACACCATGTTGATCTCGGAGCGGATCCTCACCTCCAGGCAGTC
GTCGCACTCGGAGTGCTCCAGTGGCAGGACGTTGCTATAGTTGCTGTAGT
AGCGCACCAACCGACCGTTGCTGATGTACTGGAAACGACCCTCGTGATAC
AGATCGTTGCCCCCGAACCAGAAATCCTCCGTGTTGCCCAGGCCACTCAN
GAACCCAATGGCTCCGTCGAAGTCCCTTTGGTTGCTCAAGTCTGCCAGGG
TCAGTCCTTTGCGTAGGCAGTTGTTCAGGGCGCCAAACCAGTTCATCTTT
TTCACCGAAAAGTAGTA
BO14229.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1652-PA | 969 | lectin-46Cb-RA | 118..966 | 867..19 | 4126 | 99.4 | Minus |
CG1656-PA | 987 | lectin-46Ca-RA | 538..573 | 471..436 | 155 | 97.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Cb-RB | 1039 | CG1652-RB | 123..971 | 867..19 | 4174 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:18:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9815703..9816532 | 848..19 | 4079 | 99.4 | Minus |
Blast to na_te.dros performed 2015-02-08 13:18:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 185..68 | 135 | 59.7 | Minus |
BO14229.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:37 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1652-PA | 119..969 | 16..866 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:57 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1652-PA | 119..969 | 16..866 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:51:16 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 124..977 | 12..866 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:54:25 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 124..977 | 12..866 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:54:25 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9815633..9815652 | 847..866 | 100 | -> | Minus |
2R | 9815705..9816538 | 12..846 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:51:16 Download gff for
BO14229.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5703138..5703157 | 847..866 | 100 | -> | Minus |
arm_2R | 5703210..5704043 | 12..846 | 98 | | Minus |
BO14229.5prime Sequence
874 bp (754 high quality bases) assembled on 2006-05-29
> BO14229.5prime
GAAGTTATCAGTCGACATGAAGCATCTCCTGACTGCACTCGTGGCCCTGC
TGAGCATCCTGCCGCGGGGCGAGCTCCTGGGATCAGGACCCCCCTGCCCG
CGTCGCTATTTGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAA
AAAGATGAACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGA
CCCTGGCAGACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTC
CTGAGTGGCCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCT
GTATCACGAGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCT
ACTACAGCAACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGAC
GACTGCCTGGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGA
CAACTGCCACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGG
GCACGGATAGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCAT
CACTTCCACCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGA
TGGCGATGGCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGG
AGCACCCGGAGCCGGACTCGGAGGATGCAGTCGGGGCGCTCGACGTGCCC
GATGACGATCAACCTGGTCAGAATGGCGTCTCGGTGACACCGGGAGCGGA
AGAAACAAATACCGTTGGCGGAACTGGTGAGCCGGGCGCAACTGCCACCC
CTGCCGCCGGAGCTGAAGCTGTTTCTCCAGCAGCAGAAGGAGCCGCACCC
GCCCGAGCAGCTCCAGCTGCCGAA
BO14229.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1652-PA | 969 | lectin-46Cb-RA | 1..858 | 17..874 | 4165 | 99.4 | Plus |
CG1656-PA | 987 | lectin-46Ca-RA | 538..573 | 530..565 | 155 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:28:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Cb-RB | 1039 | CG1652-RB | 2..863 | 13..874 | 4220 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:28:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9815703..9816424 | 153..874 | 3535 | 99.3 | Plus |
2R | 25286936 | 2R | 9815511..9815652 | 13..154 | 695 | 99.3 | Plus |
Blast to na_te.dros performed 2015-02-02 08:28:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2768..2853 | 788..867 | 111 | 61.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1048..1100 | 816..867 | 109 | 69.8 | Plus |
BO14229.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:38 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1652-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:58 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1652-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:26 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 2..863 | 13..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:20:49 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 2..863 | 13..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:20:49 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9815509..9815652 | 10..154 | 98 | -> | Plus |
2R | 9815705..9816424 | 155..874 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:26 Download gff for
BO14229.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5703014..5703157 | 10..154 | 98 | -> | Plus |
arm_2R | 5703210..5703929 | 155..874 | 99 | | Plus |
BO14229.complete Sequence
1000 bp assembled on 2006-10-11
GenBank Submission: FJ633048
> BO14229.complete
GAAGTTATCAGTCGACATGAAGCATCTCCTGACTGCACTCGTGGCCCTGC
TGAGCATCCTGCCGCGGGGCGAGCTCCTGGGATCAGGACCCCCCTGCCCG
CGTCGCTATTTGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAA
AAAGATGAACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGA
CCCTGGCAGACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTC
CTGAGTGGCCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCT
GTATCACGAGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCT
ACTACAGCAACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGAC
GACTGCCTGGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGA
CAACTGCCACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGG
GCACGGATAGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCAT
CACTTCCACCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGA
TGGCGATGGCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGG
AGCACCCGGAGCCGGACTCGGAGGATGCAGTCGGGGCGCTCGACGTGCCC
GATGACGATCAACCTGGTCAGAATGGCGTCTCGGTGACACCGGGAGCGGA
AGAAACAAATACCGTTGGCGGAACTGGTGAGCCGGGCGCAACTGCCACCC
CTGCCGCCGGAGCTGAAGCTGTTTCTCCAGCAGCAGAAGGAGCCGCACCC
GCCGGAGCAGCTCCAGCTGCCGAAGGTGCCGCCACTCCTGCCGCCGACGG
AGCCACGCCCGCACCCACTCCCGCGCCAGGAGCAGAAGCACCCGCCGCCG
CAGCAGCCGAGACTCCGGCACCGCCAGCAGCCGCAAGCTTTCTAGACCAT
BO14229.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:49:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Cb-RB | 969 | CG1652-PB | 1..966 | 17..982 | 4770 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Cb-RB | 1039 | CG1652-RB | 2..971 | 13..982 | 4775 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9815703..9816532 | 153..982 | 4090 | 99.5 | Plus |
2R | 25286936 | 2R | 9815511..9815652 | 13..154 | 695 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-27 20:49:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 816..933 | 135 | 59.7 | Plus |
BO14229.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:25 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RA | 1..969 | 17..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:31 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RA | 435..1410 | 13..989 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:46 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 6..971 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:25 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RA | 435..1410 | 13..989 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:51 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Cb-RB | 6..971 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:51 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9815515..9815652 | 17..154 | 100 | -> | Plus |
2R | 9815705..9816532 | 155..984 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:46 Download gff for
BO14229.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5703020..5703157 | 17..154 | 100 | -> | Plus |
arm_2R | 5703210..5704037 | 155..984 | 99 | | Plus |
BO14229.pep Sequence
Translation from 16 to 1000
> BO14229.pep
MKHLLTALVALLSILPRGELLGSGPPCPRRYLRRINGKCYYFSVKKMNWF
GALNNCLRKGLTLADLSNQRDFDGAIGFLSGLGNTEDFWFGGNDLYHEGR
FQYISNGRLVRYYSNYSNVLPLEHSECDDCLEVRIRSEINMVSADNCHER
QYFICSERYCQGTDSGKKPKHHSHEHLHHFHHDIGGSAEGEDDGDGDGDH
DRQDPIASGSVEHPEPDSEDAVGALDVPDDDQPGQNGVSVTPGAEETNTV
GGTGEPGATATPAAGAEAVSPAAEGAAPAGAAPAAEGAATPAADGATPAP
TPAPGAEAPAAAAAETPAPPAAASFLDH
BO14229.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Cb-PB | 322 | CG1652-PB | 1..322 | 1..322 | 1744 | 100 | Plus |
lectin-46Ca-PA | 328 | CG1656-PA | 31..328 | 26..313 | 613 | 46.9 | Plus |
Tm1-PF | 501 | CG4898-PF | 329..493 | 186..324 | 164 | 35.9 | Plus |
CG12111-PB | 188 | CG12111-PB | 50..173 | 34..155 | 150 | 29.4 | Plus |
CG12111-PA | 188 | CG12111-PA | 50..173 | 34..155 | 150 | 29.4 | Plus |