Clone BO14229 Report

Search the DGRC for BO14229

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:29
Vector:pDNR-Dual
Associated Gene/Transcriptlectin-46Cb-RA
Protein status:BO14229.pep: validated full length
Sequenced Size:1000

Clone Sequence Records

BO14229.3prime Sequence

867 bp (718 high quality bases) assembled on 2006-05-29

> BO14229.3prime
ATGGTCTAGAAAGCTTGCGGCTGCTGGCGGTGCCGGAGTCTCGGCTGCTG
CGGCGGCGGGTGCTTCTGCTCCTGGCGCGGGAGTGGGTGCGGGCGTGGCT
CCGTCGGCGGCAGGAGTGGCGGCACCTTCGGCAGCTGGAGCTGCTCCGGC
GGGTGCGGCTCCTTCTGCTGCTGGAGAAACAGCTTCAGCTCCGGCGGCAG
GGGTGGCAGTTGCGCCCGGCTCACCAGTTCCGCCAACGGTATTTGTTTCT
TCCGCTCCCGGTGTCACCGAGACGCCATTCTGACCAGGTTGATCGTCATC
GGGCACGTCGAGCGCCCCGACTGCATCCTCCGAGTCCGGCTCCGGGTGCT
CCACTGAGCCACTGGCAATGGGGTCCTGGCGGTCGTGGTCGCCATCGCCA
TCGCCATCGTCCTCTCCTTCGGCACTTCCGCCAATGTCGTGGTGGAAGTG
ATGCAAGTGCTCGTGACTGTGGTGCTTCGGCTTCTTGCCACTATCCGTGC
CCTGGCAGTAGCGTTCCGAGCAGATGAAGTATTGCCGCTCGTGGCAGTTG
TCTGCCGACACCATGTTGATCTCGGAGCGGATCCTCACCTCCAGGCAGTC
GTCGCACTCGGAGTGCTCCAGTGGCAGGACGTTGCTATAGTTGCTGTAGT
AGCGCACCAACCGACCGTTGCTGATGTACTGGAAACGACCCTCGTGATAC
AGATCGTTGCCCCCGAACCAGAAATCCTCCGTGTTGCCCAGGCCACTCAN
GAACCCAATGGCTCCGTCGAAGTCCCTTTGGTTGCTCAAGTCTGCCAGGG
TCAGTCCTTTGCGTAGGCAGTTGTTCAGGGCGCCAAACCAGTTCATCTTT
TTCACCGAAAAGTAGTA

BO14229.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG1652-PA 969 lectin-46Cb-RA 118..966 867..19 4126 99.4 Minus
CG1656-PA 987 lectin-46Ca-RA 538..573 471..436 155 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-46Cb-RB 1039 CG1652-RB 123..971 867..19 4174 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9815703..9816532 848..19 4079 99.4 Minus
Blast to na_te.dros performed 2015-02-08 13:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1048..1163 185..68 135 59.7 Minus

BO14229.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:37 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1652-PA 119..969 16..866 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:57 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1652-PA 119..969 16..866 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:51:16 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 124..977 12..866 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:54:25 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 124..977 12..866 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:54:25 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9815633..9815652 847..866 100 -> Minus
2R 9815705..9816538 12..846 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:51:16 Download gff for BO14229.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5703138..5703157 847..866 100 -> Minus
arm_2R 5703210..5704043 12..846 98   Minus

BO14229.5prime Sequence

874 bp (754 high quality bases) assembled on 2006-05-29

> BO14229.5prime
GAAGTTATCAGTCGACATGAAGCATCTCCTGACTGCACTCGTGGCCCTGC
TGAGCATCCTGCCGCGGGGCGAGCTCCTGGGATCAGGACCCCCCTGCCCG
CGTCGCTATTTGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAA
AAAGATGAACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGA
CCCTGGCAGACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTC
CTGAGTGGCCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCT
GTATCACGAGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCT
ACTACAGCAACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGAC
GACTGCCTGGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGA
CAACTGCCACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGG
GCACGGATAGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCAT
CACTTCCACCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGA
TGGCGATGGCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGG
AGCACCCGGAGCCGGACTCGGAGGATGCAGTCGGGGCGCTCGACGTGCCC
GATGACGATCAACCTGGTCAGAATGGCGTCTCGGTGACACCGGGAGCGGA
AGAAACAAATACCGTTGGCGGAACTGGTGAGCCGGGCGCAACTGCCACCC
CTGCCGCCGGAGCTGAAGCTGTTTCTCCAGCAGCAGAAGGAGCCGCACCC
GCCCGAGCAGCTCCAGCTGCCGAA

BO14229.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG1652-PA 969 lectin-46Cb-RA 1..858 17..874 4165 99.4 Plus
CG1656-PA 987 lectin-46Ca-RA 538..573 530..565 155 97.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-46Cb-RB 1039 CG1652-RB 2..863 13..874 4220 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9815703..9816424 153..874 3535 99.3 Plus
2R 25286936 2R 9815511..9815652 13..154 695 99.3 Plus
Blast to na_te.dros performed 2015-02-02 08:28:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2768..2853 788..867 111 61.6 Plus
roo 9092 roo DM_ROO 9092bp 1048..1100 816..867 109 69.8 Plus

BO14229.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:21:38 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1652-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:58 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1652-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:26 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 2..863 13..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:20:49 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 2..863 13..874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:20:49 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9815509..9815652 10..154 98 -> Plus
2R 9815705..9816424 155..874 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:26 Download gff for BO14229.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5703014..5703157 10..154 98 -> Plus
arm_2R 5703210..5703929 155..874 99   Plus

BO14229.complete Sequence

1000 bp assembled on 2006-10-11

GenBank Submission: FJ633048

> BO14229.complete
GAAGTTATCAGTCGACATGAAGCATCTCCTGACTGCACTCGTGGCCCTGC
TGAGCATCCTGCCGCGGGGCGAGCTCCTGGGATCAGGACCCCCCTGCCCG
CGTCGCTATTTGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAA
AAAGATGAACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGA
CCCTGGCAGACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTC
CTGAGTGGCCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCT
GTATCACGAGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCT
ACTACAGCAACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGAC
GACTGCCTGGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGA
CAACTGCCACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGG
GCACGGATAGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCAT
CACTTCCACCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGA
TGGCGATGGCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGG
AGCACCCGGAGCCGGACTCGGAGGATGCAGTCGGGGCGCTCGACGTGCCC
GATGACGATCAACCTGGTCAGAATGGCGTCTCGGTGACACCGGGAGCGGA
AGAAACAAATACCGTTGGCGGAACTGGTGAGCCGGGCGCAACTGCCACCC
CTGCCGCCGGAGCTGAAGCTGTTTCTCCAGCAGCAGAAGGAGCCGCACCC
GCCGGAGCAGCTCCAGCTGCCGAAGGTGCCGCCACTCCTGCCGCCGACGG
AGCCACGCCCGCACCCACTCCCGCGCCAGGAGCAGAAGCACCCGCCGCCG
CAGCAGCCGAGACTCCGGCACCGCCAGCAGCCGCAAGCTTTCTAGACCAT

BO14229.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-46Cb-RB 969 CG1652-PB 1..966 17..982 4770 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-46Cb-RB 1039 CG1652-RB 2..971 13..982 4775 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9815703..9816532 153..982 4090 99.5 Plus
2R 25286936 2R 9815511..9815652 13..154 695 99.3 Plus
Blast to na_te.dros performed 2014-11-27 20:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1048..1163 816..933 135 59.7 Plus

BO14229.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:25 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RA 1..969 17..985 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:31 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RA 435..1410 13..989 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:46 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 6..971 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:25 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RA 435..1410 13..989 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:28:51 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-46Cb-RB 6..971 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:28:51 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9815515..9815652 17..154 100 -> Plus
2R 9815705..9816532 155..984 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:46 Download gff for BO14229.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5703020..5703157 17..154 100 -> Plus
arm_2R 5703210..5704037 155..984 99   Plus

BO14229.pep Sequence

Translation from 16 to 1000

> BO14229.pep
MKHLLTALVALLSILPRGELLGSGPPCPRRYLRRINGKCYYFSVKKMNWF
GALNNCLRKGLTLADLSNQRDFDGAIGFLSGLGNTEDFWFGGNDLYHEGR
FQYISNGRLVRYYSNYSNVLPLEHSECDDCLEVRIRSEINMVSADNCHER
QYFICSERYCQGTDSGKKPKHHSHEHLHHFHHDIGGSAEGEDDGDGDGDH
DRQDPIASGSVEHPEPDSEDAVGALDVPDDDQPGQNGVSVTPGAEETNTV
GGTGEPGATATPAAGAEAVSPAAEGAAPAGAAPAAEGAATPAADGATPAP
TPAPGAEAPAAAAAETPAPPAAASFLDH

BO14229.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-46Cb-PB 322 CG1652-PB 1..322 1..322 1744 100 Plus
lectin-46Ca-PA 328 CG1656-PA 31..328 26..313 613 46.9 Plus
Tm1-PF 501 CG4898-PF 329..493 186..324 164 35.9 Plus
CG12111-PB 188 CG12111-PB 50..173 34..155 150 29.4 Plus
CG12111-PA 188 CG12111-PA 50..173 34..155 150 29.4 Plus