Clone BO14251 Report

Search the DGRC for BO14251

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG14644-RA
Protein status:BO14251.pep: validated full length
Sequenced Size:913

Clone Sequence Records

BO14251.3prime Sequence

836 bp (706 high quality bases) assembled on 2006-05-29

> BO14251.3prime
ATGGTCTAGAAAGCTTGCCTTCATCAAATTCCTCACAATGTCTACAGGAA
AAGGAAAGACGTAGGACCGGGTGTCATCATTGCAGATGGAGTTCAGTGTT
TGCAAGTACCGTAGCTGCAGGGCTATGGGGTTGGTCTCCATTATGTCGGC
AGCCTCCTTCAGAGCAGTTACCGCATCTCGCTCCCCCTGCGCCGCGGCCA
CCTTGGCCTTGGCCTCACGCATCGCCTCCTGTTCCACAGCCAGGGCGCGC
TTCAGTTGATCAGGCATGAAGATCTCCTTGATCTCGACCCGTTCCACGCG
TATGCCCCAGGGCTCTGTGGAGTTGTACAATATACCCTCTATTTGGTTGG
AGAGGTACTCCTTGGACGAGAGCAAATCCATTAGCTTGTGGGTGCCGGCC
ACGTTACGCAGCGTGGTCATTGCTAGCTTCTCGGTCGCCTCCTCCGGATC
GTATACTTGCAGCATGGCGTCGAATGGGCTCTTGATGCTGTAGTACACCA
CTCCGTCGATGCTGATCGTCACCATGTCACGAGTGAGGATTTCCTGTCTA
TGTAGGTCAAATGACCTGGTACGTATGTCCACAACAGCGAGGTCATCAAT
GCAGGGCACGAGAAAGATGACGCCTGGCCCCCTCGGGGGCTTAGGGCGCA
GGCGACCCAGGCGCAGGATTACCGCTCGCTCGTACTCCGACATTACCCTG
AGACAGCAGAATAGGGACCACGGCAGGCAAAGGACTATCAGAATCATGGA
CAGCACAAACAACGTTTTCTCCGCACAAGTTGGTGGAACATTCTCACTTG
TTTTTACATTACGCTGAGGTAACAGTGATTCATCGT

BO14251.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 882 CG14644-RA 62..879 836..19 4090 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 1034 CG14644-RA 130..947 836..19 4090 100 Minus
CG14644-RB 995 CG14644-RB 228..908 699..19 3405 100 Minus
CG14644-RB 995 CG14644-RB 130..170 836..796 205 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252814 281..797 2585 100 Plus
3R 32079331 3R 4251981..4252242 19..280 1310 100 Plus
3R 32079331 3R 4252874..4252914 796..836 205 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:02:29 has no hits.

BO14251.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:20 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 62..882 18..836 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:57 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 62..882 18..836 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:35:09 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 130..954 11..836 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:19 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 130..954 11..836 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:19 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4251974..4252242 11..280 98 <- Plus
3R 4252298..4252814 281..797 100 <- Plus
3R 4252876..4252914 798..836 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:35:09 Download gff for BO14251.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77696..77964 11..280 98 <- Plus
arm_3R 78020..78536 281..797 100 <- Plus
arm_3R 78598..78636 798..836 100   Plus

BO14251.5prime Sequence

829 bp (754 high quality bases) assembled on 2006-05-29

> BO14251.5prime
GAAGTTATCAGTCGACATGGACAATAATCCGACGACCCCTGCTTTGCTTG
CTCAGAGCTCCTCGGTAAACGTGTTCCACGATGAATCACTGTTACCTCAG
CGTAATGTAAAAACAAGTGAGAATGTTCCACCAACTTGTGCGGAGAAAAC
GTTGTTTGTGCTGTCCATGATTCTGATAGTCCTTTGCCTGCCGTGGTCCC
TATTCTGCTGTCTCAGGGTAATGTCGGAGTACGAGCGAGCGGTAATCCTG
CGCCTGGGTCGCCTGCGCCCTAAGCCCCCGAGGGGGCCAGGCGTCATCTT
TCTCGTGCCCTGCATTGATGACCTCGCTGTTGTGGACATACGTACCAGGT
CATTTGACCTACATAGACAGGAAATCCTCACTCGTGACATGGTGACGATC
AGCATCGACGGAGTGGTGTACTACAGCATCAAGAGCCCATTCGACGCCAT
GCTGCAAGTATACGATCCGGAGGAGGCGACCGAGAAGCTAGCAATGACCA
CGCTGCGTAACGTGGCCGGCACCCACAAGCTAATGGATTTGCTCTCGTCC
AAGGAGTACCTCTCCAACCAAATAGAGGGTATATTGTACAACTCCACAGA
GCCCTGGGGCATACGCGTGGAACGGGTCGAGATCAAGGAGATCTTCATGC
CTGATCAACTGAAGCGCGCCCTGGCTGTGGAACAGGAGGCGATGCGTGAG
GCCAAGGCCAAGGTGGCCGCGGCGCAGGGGGAGCGAGATGCGGTAACTGC
TCTGAAAGAGGCTGCCGACATAATGGAGACCAACCCCATAGCCCTGCAGC
TACGGTACTTGCAAACACTGAACTCCATC

BO14251.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 882 CG14644-RA 1..813 17..829 4040 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 1034 CG14644-RA 69..881 17..829 4050 99.9 Plus
CG14644-RB 995 CG14644-RB 228..842 215..829 3060 99.8 Plus
CG14644-RB 995 CG14644-RB 69..170 17..118 510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252814 633..117 2585 100 Minus
3R 32079331 3R 4252047..4252242 829..634 965 99.5 Minus
3R 32079331 3R 4252874..4252975 118..17 510 100 Minus
Blast to na_te.dros performed on 2015-02-09 22:59:57 has no hits.

BO14251.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:21 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:59 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 1..813 17..829 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:24:57 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..881 11..829 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:50:54 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..881 11..829 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:50:54 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4252047..4252242 634..829 99 <- Minus
3R 4252298..4252814 117..633 100 <- Minus
3R 4252876..4252978 11..116 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:24:57 Download gff for BO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77769..77964 634..829 99 <- Minus
arm_3R 78020..78536 117..633 100 <- Minus
arm_3R 78598..78700 11..116 97   Minus

BO14251.complete Sequence

913 bp assembled on 2006-10-11

GenBank Submission: FJ633056

> BO14251.complete
GAAGTTATCAGTCGACATGGACAATAATCCGACGACCCCTGCTTTGCTTG
CTCAGAGCTCCTCGGTAAACGTGTTCCACGATGAATCACTGTTACCTCAG
CGTAATGTAAAAACAAGTGAGAATGTTCCACCAACTTGTGCGGAGAAAAC
GTTGTTTGTGCTGTCCATGATTCTGATAGTCCTTTGCCTGCCGTGGTCCC
TATTCTGCTGTCTCAGGGTAATGTCGGAGTACGAGCGAGCGGTAATCCTG
CGCCTGGGTCGCCTGCGCCCTAAGCCCCCGAGGGGGCCAGGCGTCATCTT
TCTCGTGCCCTGCATTGATGACCTCGCTGTTGTGGACATACGTACCAGGT
CATTTGACCTACATAGACAGGAAATCCTCACTCGTGACATGGTGACGATC
AGCATCGACGGAGTGGTGTACTACAGCATCAAGAGCCCATTCGACGCCAT
GCTGCAAGTATACGATCCGGAGGAGGCGACCGAGAAGCTAGCAATGACCA
CGCTGCGTAACGTGGCCGGCACCCACAAGCTAATGGATTTGCTCTCGTCC
AAGGAGTACCTCTCCAACCAAATAGAGGGTATATTGTACAACTCCACAGA
GCCCTGGGGCATACGCGTGGAACGGGTCGAGATCAAGGAGATCTTCATGC
CTGATCAACTGAAGCGCGCCCTGGCTGTGGAACAGGAGGCGATGCGTGAG
GCCAAGGCCAAGGTGGCCGCGGCGCAGGGGGAGCGAGATGCGGTAACTGC
TCTGAAGGAGGCTGCCGACATAATGGAGACCAACCCCATAGCCCTGCAGC
TACGGTACTTGCAAACACTGAACTCCATCTGCAATGATGACACCCGGTCC
TACGTCTTTCCTTTTCCTGTAGACATTGTGAGGAATTTGATGAAGGCAAG
CTTTCTAGACCAT

BO14251.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 882 CG14644-PA 1..879 17..895 4395 100 Plus
CG14644-RB 678 CG14644-PB 1..675 221..895 3375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 1034 CG14644-RA 69..947 17..895 4395 100 Plus
CG14644-RB 995 CG14644-RB 228..908 215..895 3405 100 Plus
CG14644-RB 995 CG14644-RB 69..170 17..118 510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252814 633..117 2585 100 Minus
3R 32079331 3R 4251981..4252242 895..634 1310 100 Minus
3R 32079331 3R 4252874..4252975 118..17 510 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:08:07 has no hits.

BO14251.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:36 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 1..882 17..896 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:54 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..954 11..903 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:00 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 69..947 17..897 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:36 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..954 11..903 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:28 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 69..947 17..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:28 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4252876..4252975 17..116 100   Minus
3R 4251979..4252242 634..897 99 <- Minus
3R 4252298..4252814 117..633 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:00 Download gff for BO14251.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77701..77964 634..897 99 <- Minus
arm_3R 78020..78536 117..633 100 <- Minus
arm_3R 78598..78697 17..116 100   Minus

BO14251.pep Sequence

Translation from 16 to 913

> BO14251.pep
MDNNPTTPALLAQSSSVNVFHDESLLPQRNVKTSENVPPTCAEKTLFVLS
MILIVLCLPWSLFCCLRVMSEYERAVILRLGRLRPKPPRGPGVIFLVPCI
DDLAVVDIRTRSFDLHRQEILTRDMVTISIDGVVYYSIKSPFDAMLQVYD
PEEATEKLAMTTLRNVAGTHKLMDLLSSKEYLSNQIEGILYNSTEPWGIR
VERVEIKEIFMPDQLKRALAVEQEAMREAKAKVAAAQGERDAVTALKEAA
DIMETNPIALQLRYLQTLNSICNDDTRSYVFPFPVDIVRNLMKASFLDH

BO14251.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 293 CG14644-PA 1..293 1..293 1490 100 Plus
CG14644-PB 225 CG14644-PB 1..225 69..293 1133 100 Plus
CG33253-PA 367 CG33253-PA 33..315 5..288 692 48.2 Plus
CG33253-PB 414 CG33253-PB 33..315 5..288 692 48.2 Plus
CG33253-PC 302 CG33253-PC 3..250 41..288 658 50.4 Plus