Clone BO14257 Report

Search the DGRC for BO14257

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG15549-RA
Protein status:BO14257.pep:
Sequenced Size:445

Clone Sequence Records

BO14257.5prime Sequence

443 bp (442 high quality bases) assembled on 2006-05-29

> BO14257.5prime
GAAGTTATCAGTCGACATGTTGGCCAATCTGTTGACCCTAAGCTGCCTTC
TGGCCCAAATTATCCCTCGGATTTGGGGGCAGTATGCGGCGGTGAACTGC
TCAGATCCCAGGATCGAACTGACATCCTGTGGCCGCTTCAGTACGAACGG
GTGCTGTGCCAAGGGATGTGTGAGGAATGTGCGCGGAAGGTGCGTCCAGG
AGGAGTGCACCGCATCCTGGAGCGGCTGGCTTCAAAGGCCAGTGACCATG
AGCTGCTACTTCCACTGGTTCCTGCTGATCTTCGCCGGGCTCATCACGGC
CCTCATGCTGGGCCTGGTGGCCTGCAACGCGGCCTGCGAAATAAGGCGCT
ACCTTCGCCAGCGGAGAATCGAGCGATTCAGGCGCTTCAGGGATCTGAGC
GGAGTCTCCATTGGATCCACTCAGTGCGCAAGCTTTCTAGACC

BO14257.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-PA 414 CG15549-RA 1..411 17..427 2055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-RA 1112 CG15549-RA 50..460 17..427 2055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30936048..30936458 427..17 2055 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:29:48 has no hits.

BO14257.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:34 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-PA 1..414 17..428 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:16 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-PA 1..414 17..428 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:46:53 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 9..433 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:10:21 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 9..433 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:10:21 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30936042..30936462 9..433 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:46:53 Download gff for BO14257.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26761764..26762184 9..433 98   Minus

BO14257.3prime Sequence

443 bp (442 high quality bases) assembled on 2006-05-29

> BO14257.3prime
ATGGTCTAGAAAGCTTGCGCACTGAGTGGATCCAATGGAGACTCCGCTCA
GATCCCTGAAGCGCCTGAATCGCTCGATTCTCCGCTGGCGAAGGTAGCGC
CTTATTTCGCAGGCCGCGTTGCAGGCCACCAGGCCCAGCATGAGGGCCGT
GATGAGCCCGGCGAAGATCAGCAGGAACCAGTGGAAGTAGCAGCTCATGG
TCACTGGCCTTTGAAGCCAGCCGCTCCAGGATGCGGTGCACTCCTCCTGG
ACGCACCTTCCGCGCACATTCCTCACACATCCCTTGGCACAGCACCCGTT
CGTACTGAAGCGGCCACAGGATGTCAGTTCGATCCTGGGATCTGAGCAGT
TCACCGCCGCATACTGCCCCCAAATCCGAGGGATAATTTGGGCCAGAAGG
CAGCTTAGGGTCAACAGATTGGCCAACATGTCGACTGATAACT

BO14257.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-PA 414 CG15549-RA 1..411 429..19 2055 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-RA 1112 CG15549-RA 50..460 429..19 2055 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30936048..30936458 19..429 2055 100 Plus
Blast to na_te.dros performed on 2015-02-02 19:46:23 has no hits.

BO14257.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:32 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-PA 1..414 18..429 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:14 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-PA 1..414 18..429 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:54:56 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 13..437 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:11:29 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 13..437 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:11:29 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30936042..30936462 13..437 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:54:56 Download gff for BO14257.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26761764..26762184 13..437 98   Plus

BO14257.complete Sequence

445 bp assembled on 2007-06-22

GenBank Submission: FJ633059

> BO14257.complete
GAAGTTATCAGTCGACATGTTGGCCAATCTGTTGACCCTAAGCTGCCTTC
TGGCCCAAATTATCCCTCGGATTTGGGGGCAGTATGCGGCGGTGAACTGC
TCAGATCCCAGGATCGAACTGACATCCTGTGGCCGCTTCAGTACGAACGG
GTGCTGTGCCAAGGGATGTGTGAGGAATGTGCGCGGAAGGTGCGTCCAGG
AGGAGTGCACCGCATCCTGGAGCGGCTGGCTTCAAAGGCCAGTGACCATG
AGCTGCTACTTCCACTGGTTCCTGCTGATCTTCGCCGGGCTCATCACGGC
CCTCATGCTGGGCCTGGTGGCCTGCAACGCGGCCTGCGAAATAAGGCGCT
ACCTTCGCCAGCGGAGAATCGAGCGATTCAGGCGCTTCAGGGATCTGAGC
GGAGTCTCCATTGGATCCACTCAGTGCGCAAGCTTTCTAGACCAT

BO14257.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-RA 414 CG15549-PA 1..411 17..427 2055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-RA 1112 CG15549-RA 50..460 17..427 2055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30936048..30936458 427..17 2055 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:46:23 has no hits.

BO14257.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:21 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 1..414 17..428 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:13 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 9..433 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:24 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 55..460 22..429 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:21 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 9..433 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:40 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 55..460 22..429 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:40 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30936046..30936453 22..429 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:24 Download gff for BO14257.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26761768..26762175 22..429 99   Minus

BO14257.pep Sequence

Translation from 16 to 445

> BO14257.pep
MLANLLTLSCLLAQIIPRIWGQYAAVNCSDPRIELTSCGRFSTNGCCAKG
CVRNVRGRCVQEECTASWSGWLQRPVTMSCYFHWFLLIFAGLITALMLGL
VACNAACEIRRYLRQRRIERFRRFRDLSGVSIGSTQCASFLDH

BO14257.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-PA 137 CG15549-PA 1..137 1..137 742 100 Plus