Clone Sequence Records
BO14257.5prime Sequence
443 bp (442 high quality bases) assembled on 2006-05-29
> BO14257.5prime
GAAGTTATCAGTCGACATGTTGGCCAATCTGTTGACCCTAAGCTGCCTTC
TGGCCCAAATTATCCCTCGGATTTGGGGGCAGTATGCGGCGGTGAACTGC
TCAGATCCCAGGATCGAACTGACATCCTGTGGCCGCTTCAGTACGAACGG
GTGCTGTGCCAAGGGATGTGTGAGGAATGTGCGCGGAAGGTGCGTCCAGG
AGGAGTGCACCGCATCCTGGAGCGGCTGGCTTCAAAGGCCAGTGACCATG
AGCTGCTACTTCCACTGGTTCCTGCTGATCTTCGCCGGGCTCATCACGGC
CCTCATGCTGGGCCTGGTGGCCTGCAACGCGGCCTGCGAAATAAGGCGCT
ACCTTCGCCAGCGGAGAATCGAGCGATTCAGGCGCTTCAGGGATCTGAGC
GGAGTCTCCATTGGATCCACTCAGTGCGCAAGCTTTCTAGACC
BO14257.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-PA | 414 | CG15549-RA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-RA | 1112 | CG15549-RA | 50..460 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:29:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30936048..30936458 | 427..17 | 2055 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:29:48 has no hits.
BO14257.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:34 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-PA | 1..414 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:16 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-PA | 1..414 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:46:53 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 9..433 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:10:21 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 9..433 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:10:21 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30936042..30936462 | 9..433 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:46:53 Download gff for
BO14257.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26761764..26762184 | 9..433 | 98 | | Minus |
BO14257.3prime Sequence
443 bp (442 high quality bases) assembled on 2006-05-29
> BO14257.3prime
ATGGTCTAGAAAGCTTGCGCACTGAGTGGATCCAATGGAGACTCCGCTCA
GATCCCTGAAGCGCCTGAATCGCTCGATTCTCCGCTGGCGAAGGTAGCGC
CTTATTTCGCAGGCCGCGTTGCAGGCCACCAGGCCCAGCATGAGGGCCGT
GATGAGCCCGGCGAAGATCAGCAGGAACCAGTGGAAGTAGCAGCTCATGG
TCACTGGCCTTTGAAGCCAGCCGCTCCAGGATGCGGTGCACTCCTCCTGG
ACGCACCTTCCGCGCACATTCCTCACACATCCCTTGGCACAGCACCCGTT
CGTACTGAAGCGGCCACAGGATGTCAGTTCGATCCTGGGATCTGAGCAGT
TCACCGCCGCATACTGCCCCCAAATCCGAGGGATAATTTGGGCCAGAAGG
CAGCTTAGGGTCAACAGATTGGCCAACATGTCGACTGATAACT
BO14257.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-PA | 414 | CG15549-RA | 1..411 | 429..19 | 2055 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:46:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-RA | 1112 | CG15549-RA | 50..460 | 429..19 | 2055 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30936048..30936458 | 19..429 | 2055 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 19:46:23 has no hits.
BO14257.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:32 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-PA | 1..414 | 18..429 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:14 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-PA | 1..414 | 18..429 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:54:56 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 13..437 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:11:29 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 13..437 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:11:29 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30936042..30936462 | 13..437 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:54:56 Download gff for
BO14257.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26761764..26762184 | 13..437 | 98 | | Plus |
BO14257.complete Sequence
445 bp assembled on 2007-06-22
GenBank Submission: FJ633059
> BO14257.complete
GAAGTTATCAGTCGACATGTTGGCCAATCTGTTGACCCTAAGCTGCCTTC
TGGCCCAAATTATCCCTCGGATTTGGGGGCAGTATGCGGCGGTGAACTGC
TCAGATCCCAGGATCGAACTGACATCCTGTGGCCGCTTCAGTACGAACGG
GTGCTGTGCCAAGGGATGTGTGAGGAATGTGCGCGGAAGGTGCGTCCAGG
AGGAGTGCACCGCATCCTGGAGCGGCTGGCTTCAAAGGCCAGTGACCATG
AGCTGCTACTTCCACTGGTTCCTGCTGATCTTCGCCGGGCTCATCACGGC
CCTCATGCTGGGCCTGGTGGCCTGCAACGCGGCCTGCGAAATAAGGCGCT
ACCTTCGCCAGCGGAGAATCGAGCGATTCAGGCGCTTCAGGGATCTGAGC
GGAGTCTCCATTGGATCCACTCAGTGCGCAAGCTTTCTAGACCAT
BO14257.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-RA | 414 | CG15549-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-RA | 1112 | CG15549-RA | 50..460 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30936048..30936458 | 427..17 | 2055 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:46:23 has no hits.
BO14257.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:21 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 1..414 | 17..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:13 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 9..433 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:24 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 55..460 | 22..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:21 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 46..466 | 9..433 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:40 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15549-RA | 55..460 | 22..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:40 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30936046..30936453 | 22..429 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:24 Download gff for
BO14257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26761768..26762175 | 22..429 | 99 | | Minus |
BO14257.pep Sequence
Translation from 16 to 445
> BO14257.pep
MLANLLTLSCLLAQIIPRIWGQYAAVNCSDPRIELTSCGRFSTNGCCAKG
CVRNVRGRCVQEECTASWSGWLQRPVTMSCYFHWFLLIFAGLITALMLGL
VACNAACEIRRYLRQRRIERFRRFRDLSGVSIGSTQCASFLDH
BO14257.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:38:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15549-PA | 137 | CG15549-PA | 1..137 | 1..137 | 742 | 100 | Plus |