Clone BO14263 Report

Search the DGRC for BO14263

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG3124-RA
Protein status:BO14263.pep: validated full length
Sequenced Size:883

Clone Sequence Records

BO14263.3prime Sequence

752 bp (676 high quality bases) assembled on 2006-05-29

> BO14263.3prime
ATGGTCTAGAAAGCTTGCACGCCAATGGGGGACCTTGCTAACCGCTTTTC
CACAATTGAATGATTGATTGCCTTTGCTGTACTTCGATGAATCGTGTATC
GATGGTGCGTTTAGACCGTTCCGCATATCCCGGTACATGGGAGCGTCGTA
GGAGGTCTTCATCCGGTTGACCTGTTGGTGTCCCTGGCTCGGCTGCTGAT
AGTGCTGCTGCTGCTGTTGCTGCTGCTGCTGGTGCTGCTGGTGGTACTGC
GGCTGGTGACTCTGCATAGGCTGACTGTATTGCCACATATTGGAGCTGTT
CATCATTTGGTTGGGGCTGGGACCGGAGCTCCAGCCGCCAGCTTGCGAGG
GCGACGAGGGACAGGGCGCAGACATCACAGCATTGCAGCCGCCCGTCAGA
CGTCCTTGATGCATTTGGGTGGTAGATCCACTGGGATTGTACTGTTGCAG
CGGCTGCATCTGACCCATCGAGGTCATCGGCTGCAGGTCAGGCAGCACTG
CATTGATCCCGGGGGCATCGATGGCGCCCATGGGATTGCCCATCATGGGC
ATCATGGTCATGCTGCTCAGGGGAGTCACCGCTCCAATCGGCAGCTGGGT
GGACATCGTGGACATGGGGGTCATCTGATTGCCCCCTTGCATCATGCCCA
GCGGCATACCCTGCATTGGGTACGACGAAGCGCCCGACTGGCACACGGGC
ATCTGCATCTGCAGATTCATCTGCGGTGGATTCAGGGGCTGCATGGCCAT
GG

BO14263.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-PA 852 CG3124-RA 116..849 752..19 3670 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-RA 1179 CG3124-RA 261..994 752..19 3670 100 Minus
CG3124-RB 1206 CG3124-RB 261..904 752..109 3220 100 Minus
CG3124-RB 1206 CG3124-RB 931..1021 109..19 455 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23283153..23283795 110..752 3215 100 Plus
2R 25286936 2R 23283017..23283076 50..109 300 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:14:10 has no hits.

BO14263.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:43 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-PA 116..852 16..752 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:30 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-PA 116..852 16..752 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:11:02 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 261..994 19..752 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:45:03 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 261..994 19..752 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:45:03 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23283018..23283076 51..109 100 <- Plus
2R 23282928..23282959 19..50 100 <- Plus
2R 23283153..23283795 110..752 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:11:02 Download gff for BO14263.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19170451..19170482 19..50 100 <- Plus
arm_2R 19170541..19170599 51..109 100 <- Plus
arm_2R 19170676..19171318 110..752 100   Plus

BO14263.5prime Sequence

807 bp (722 high quality bases) assembled on 2006-05-29

> BO14263.5prime
GAAGTTATCAGTCGACATGAATTTTTGTTCAGTGCCTTACGAAGCTGACT
ACGGCATGTACGCCGATTCCAAGATGAAGAGCGTTCCTCAGTACCCCCTG
AGCATGGGAGTCGGTCAGGGTCAAGGACAGTCCATGGCCATGCAGCCCCT
GAATCCACCGCAGATGAATCTGCAGATGCAGATGCCCGTGTGCCAGTCGG
GCGCTTCGTCGTACCCAATGCAGGGTATGCCGCTGGGCATGATGCAAGGG
GGCAATCAGATGACCCCCATGTCCACGATGTCCACCCAGCTGCCGATTGG
AGCGGTGACTCCCCTGAGCAGCATGACCATGATGCCCATGATGGGCAATC
CCATGGGCGCCATCGATGCCCCCGGGATCAATGCAGTGCTGCCTGACCTG
CAGCCGATGACCTCGATGGGTCAGATGCAGCCGCTGCAACAGTACAATCC
CAGTGGATCTACCACCCAAATGCATCAAGGACGTCTGACGGGCGGCTGCA
ATGCTGTGATGTCTGCGCCCTGTCCCTCGTCGCCCTCGCAAGCTGGCGGC
TGGAGCTCCGGTCCCAGCCCCAACCAAATGATGAACAGCTCCAATATGTG
GCAATACAGTCAGCCTATGCAGAGTCACCAGCCGCAGTACCACCAGCAGC
ACCAGCAGCAGCAGCAACAGCAGCAGCAGCACTATCAGCAGCCGAGCCAG
GGACACCAACAGGTCAACCGGATGAAGACCTCCTACGACGCTCCCATGTA
CCGGGATATGCGGAACGGTCTAAACGCACCATCGATACACGATTCATCGA
AATACAG

BO14263.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-PA 852 CG3124-RA 1..791 17..807 3880 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-RA 1179 CG3124-RA 146..936 17..807 3910 99.6 Plus
CG3124-RB 1206 CG3124-RB 146..904 17..775 3765 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23283153..23283855 774..72 3485 99.7 Minus
2R 25286936 2R 23283912..23283968 73..17 285 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:04:26 has no hits.

BO14263.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:44 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-PA 1..791 17..807 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:31 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-PA 1..791 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:53:49 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 138..936 9..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:53:38 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 138..936 9..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:53:38 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23283912..23283976 9..73 95   Minus
2R 23283044..23283076 775..807 96 <- Minus
2R 23283153..23283853 74..774 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:53:49 Download gff for BO14263.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19170567..19170599 775..807 96 <- Minus
arm_2R 19170676..19171376 74..774 99 <- Minus
arm_2R 19171435..19171499 9..73 95   Minus

BO14263.complete Sequence

883 bp assembled on 2006-10-11

GenBank Submission: FJ633062

> BO14263.complete
GAAGTTATCAGTCGACATGAATTTTTGTTCAGTGCCTTACGAAGCTGACT
ACGGCATGTACGCCGATTCCAAGATGAAGAGCGTTCCTCAGTACCCCCTG
AGCATGGGAGTCGGTCAGGGTCAAGGACAGTCCATGGCCATGCAGCCCCT
GAATCCACCGCAGATGAATCTGCAGATGCAGATGCCCGTGTGCCAGTCGG
GCGCTTCGTCGTACCCAATGCAGGGTATGCCGCTGGGCATGATGCAAGGG
GGCAATCAGATGACCCCCATGTCCACGATGTCCACCCAGCTGCCGATTGG
AGCGGTGACTCCCCTGAGCAGCATGACCATGATGCCCATGATGGGCAATC
CCATGGGCGCCATCGATGCCCCCGGGATCAATGCAGTGCTGCCTGACCTG
CAGCCGATGACCTCGATGGGTCAGATGCAGCCGCTGCAACAGTACAATCC
CAGTGGATCTACCACCCAAATGCATCAAGGACGTCTGACGGGCGGCTGCA
ATGCTGTGATGTCTGCGCCCTGTCCCTCGTCGCCCTCGCAAGCTGGCGGC
TGGAGCTCCGGTCCCAGCCCCAACCAAATGATGAACAGCTCCAATATGTG
GCAATACAGTCAGCCTATGCAGAGTCACCAGCCGCAGTACCACCAGCAGC
ACCAGCAGCAGCAGCAACAGCAGCAGCAGCACTATCAGCAGCCGAGCCAG
GGACACCAACAGGTCAACCGGATGAAGACCTCCTACGACGCTCCCATGTA
CCGGGATATGCGGAACGGTCTAAACGCACCATCGATACACGATTCATCGA
AGTACAGCAAAGGCAATCAATCATTCAATTGTGGAAAAGCGGTTAGCAAG
GTCCCCCATTGGCGTGCAAGCTTTCTAGACCAT

BO14263.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-RA 852 CG3124-PA 1..849 17..865 4215 99.8 Plus
CG3124-RB 771 CG3124-PB 1..759 17..775 3765 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-RA 1179 CG3124-RA 146..994 17..865 4215 99.8 Plus
CG3124-RB 1206 CG3124-RB 146..904 17..775 3765 99.7 Plus
CG3124-RB 1206 CG3124-RB 931..1021 775..865 455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23283153..23283855 774..72 3485 99.7 Minus
2R 25286936 2R 23283017..23283076 834..775 300 100 Minus
2R 25286936 2R 23283912..23283968 73..17 285 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:40:35 has no hits.

BO14263.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:49 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 1..852 17..868 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:03 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 138..994 9..865 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:12 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 146..994 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:49 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 128..984 9..865 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:01 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
CG3124-RA 146..994 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:01 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23282924..23282959 834..867 94 <- Minus
2R 23283018..23283076 775..833 100 <- Minus
2R 23283153..23283853 74..774 99 <- Minus
2R 23283912..23283968 17..73 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:12 Download gff for BO14263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19170447..19170482 834..867 94 <- Minus
arm_2R 19170541..19170599 775..833 100 <- Minus
arm_2R 19170676..19171376 74..774 99 <- Minus
arm_2R 19171435..19171491 17..73 100   Minus

BO14263.pep Sequence

Translation from 16 to 883

> BO14263.pep
MNFCSVPYEADYGMYADSKMKSVPQYPLSMGVGQGQGQSMAMQPLNPPQM
NLQMQMPVCQSGASSYPMQGMPLGMMQGGNQMTPMSTMSTQLPIGAVTPL
SSMTMMPMMGNPMGAIDAPGINAVLPDLQPMTSMGQMQPLQQYNPSGSTT
QMHQGRLTGGCNAVMSAPCPSSPSQAGGWSSGPSPNQMMNSSNMWQYSQP
MQSHQPQYHQQHQQQQQQQQQHYQQPSQGHQQVNRMKTSYDAPMYRDMRN
GLNAPSIHDSSKYSKGNQSFNCGKAVSKVPHWRASFLDH

BO14263.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG3124-PA 283 CG3124-PA 1..283 1..283 1539 100 Plus
CG3124-PB 256 CG3124-PB 1..255 1..255 1377 99.6 Plus