Clone Sequence Records
BO14266.3prime Sequence
813 bp (750 high quality bases) assembled on 2006-05-29
> BO14266.3prime
ATGGTCTAGAAAGCTTGCATTAGCACGTGGCACACATCCCACCTTGTAGA
TCCTGAAGGGCACATTGTGGCGCCTCTCGTCCAATGTGATGAGCATGCAG
TAGAGCAGTTGCTGCAGCTTTCGCATCCTCAGCACATACGGGGCACTTTC
GCAGTCCTTGAAAAGCGGCCTTCCCCTCGCCTGGCAGTGGAAGAGGAAGA
AGGCTCCGCCGGAGGCGAACTCTGGGATAAACCCAAAGGCCAGAGCCTGA
TCCCTAAGCTGAAGAATTCCCGTTTGCAAGTGCTGGCCAAAGAACTTACT
CAGTGCGGATCCCAGGCTCTTGGTTCTGCTGTACAATTTACCGGTACAGA
GCTTTTCGATGTCCACCCAAAACTCGTGACCATCAAGGAAGCAGGTGGTG
TTCAAGCACTCCAGACAGAGCTCTCCTGTACGATCCCAATGTTGCCTGGT
CGCCAAGCTTTCGTCATAGTAGCCCCGCCCATTCGACATGATCTTGTCCA
GCGCACTGGAGTTCCAGGAATCCAAGGACTGAAAACTGCCTGCACAACAG
GCTAACACGCAGCATGCCAATGCCTGACCAGGAGGTGAGGTCCTTTCGGA
TCCGGACTCCGACGAGGAACTATTTTCCCCTGGTTTCACTTGCTGTGTGC
TGCCCCAAAGTGACCACAAGTGGTTGGAGATCTCCACCTCGTAGTGCTCC
TCCTTTTCCCCACTTCTCTTCCGCAGACAACCTTCGGCATTGTGCTCCAA
AAGACGACTCCACGGCGGCAAAGGCCTCTCAGGGTGGACTACTTCCCTGG
CCATCGAACGGGT
BO14266.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PA | 831 | CG14402-RA | 34..828 | 813..19 | 3825 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 120..914 | 813..19 | 3885 | 99.2 | Minus |
| CG14402-RA | 1688 | CG14402-RA | 120..914 | 813..19 | 3885 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849419..20850213 | 813..19 | 3885 | 99.2 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:26:48 has no hits.
BO14266.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:50 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 34..831 | 18..813 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:38 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 34..831 | 18..813 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:17:30 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 120..919 | 12..813 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:45:13 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 120..919 | 12..813 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:45:13 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849419..20850218 | 12..813 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:17:30 Download gff for
BO14266.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849419..20850218 | 12..813 | 98 | | Minus |
BO14266.5prime Sequence
855 bp (782 high quality bases) assembled on 2006-05-29
> BO14266.5prime
GAAGTTATCAGTCGACATGTGGCAAGGACACAAGGAAAAACCCACTTCCA
CCCGTTCGATGGCCAGGGAAGTAGTCCACCCTGAGAGGCCTTTGCCGCCG
TGGAGTCGTCTTCTGGAGCACAATGCCGAAGGTTGTCTGCGGAAGAGAAG
TGGGGAAAAGGAGGAGCACTACGAGGTGGAGATCTCCAACCACTTGTGGT
CACTTTGGGGCAGCACACAGCAAGTGAAACCAGGGGAAAATAGTTCCTCG
TCGGAGTCCGGATCCGAAAGGACCTCACCTCCTGGTCAGGCATTGGCATG
CTGCGTGTTAGCCTGTTGTGCAGGCAGTTTTCAGTCCTTGGATTCCTGGA
ACTCCAGTGCGCTGGACAAGATCATGTCGAATGGGCGGGGCTACTATGAC
GAAAGCTTGGCGACCAGGCAACATTGGGATCGTACAGGAGAGCTCTGTCT
GGAGTGCTTGAACACCACCTGCTTCCTTGATGGTCACGAGTTTTGGGTGG
ACATCGAAAAGCTCTGTACCGGTAAATTGTACAGCAGAACCAAGAGCCTG
GGATCCGCACTGAGTAAGTTCTTTGGCCAGCACTTGCAAACGGGAATTCT
TCAGCTTAGGGATCAGGCTCTGGCCTTTGGGTTTATCCCAGAGTTCGCCT
CCGGCGGAGCCTTCTTCCTCTTCCACTGCCAGGCGAGGGGAAGGCCGCTT
TTCAAGGACTGCGAAAGTGCCCCGTATGTGCTGAGGATGCGAAAGCTGCA
GCAACTGCTCTACTGCATGCTCATCACATTGGACGAGAGGCGCCACAATG
TGCCCTTCAGGATCTACAAGGTGGGATGTGTGCCACGTGCTAATGCAAGC
TTTCT
BO14266.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PA | 831 | CG14402-RA | 1..828 | 17..844 | 4015 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 83..914 | 13..844 | 4070 | 99.3 | Plus |
| CG14402-RA | 1688 | CG14402-RA | 83..914 | 13..844 | 4070 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849382..20850213 | 13..844 | 4070 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-09 23:08:47 has no hits.
BO14266.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:50 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:40 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:25:50 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..919 | 9..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:52:16 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..919 | 9..851 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:52:16 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849378..20850218 | 9..851 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:25:50 Download gff for
BO14266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849378..20850218 | 9..851 | 98 | | Plus |
BO14266.complete Sequence
862 bp assembled on 2006-10-11
GenBank Submission: FJ633064
> BO14266.complete
GAAGTTATCAGTCGACATGTGGCAAGGACACAAGGAAAAACCCACTTCCA
CCCGTTCGATGGCCAGGGAAGTAGTCCACCCTGAGAGGCCTTTGCCGCCG
TGGAGTCGTCTTCTGGAGCACAATGCCGAAGGTTGTCTGCGGAAGAGAAG
TGGGGAAAAGGAGGAGCACTACGAGGTGGAGATCTCCAACCACTTGTGGT
CACTTTGGGGCAGCACACAGCAAGTGAAACCAGGGGAAAATAGTTCCTCG
TCGGAGTCCGGATCCGAAAGGACCTCACCTCCTGGTCAGGCATTGGCATG
CTGCGTGTTAGCCTGTTGTGCAGGCAGTTTTCAGTCCTTGGATTCCTGGA
ACTCCAGTGCGCTGGACAAGATCATGTCGAATGGGCGGGGCTACTATGAC
GAAAGCTTGGCGACCAGGCAACATTGGGATCGTACAGGAGAGCTCTGTCT
GGAGTGCTTGAACACCACCTGCTTCCTTGATGGTCACGAGTTTTGGGTGG
ACATCGAAAAGCTCTGTACCGGTAAATTGTACAGCAGAACCAAGAGCCTG
GGATCCGCACTGAGTAAGTTCTTTGGCCAGCACTTGCAAACGGGAATTCT
TCAGCTTAGGGATCAGGCTCTGGCCTTTGGGTTTATCCCAGAGTTCGCCT
CCGGCGGAGCCTTCTTCCTCTTCCACTGCCAGGCGAGGGGAAGGCCGCTT
TTCAAGGACTGCGAAAGTGCCCCGTATGTGCTGAGGATGCGAAAGCTGCA
GCAACTGCTCTACTGCATGCTCATCACATTGGACGAGAGGCGCCACAATG
TGCCCTTCAGGATCTACAAGGTGGGATGTGTGCCACGTGCTAATGCAAGC
TTTCTAGACCAT
BO14266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:15:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 831 | CG14402-PB | 1..828 | 17..844 | 4065 | 99.4 | Plus |
| CG14402-RA | 831 | CG14402-PA | 1..828 | 17..844 | 4065 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:15:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 83..914 | 13..844 | 4070 | 99.3 | Plus |
| CG14402-RA | 1688 | CG14402-RA | 83..914 | 13..844 | 4070 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:15:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849382..20850213 | 13..844 | 4070 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:15:03 has no hits.
BO14266.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:54 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:02:54 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 22..862 | 9..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:48:23 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 87..914 | 17..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:54 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 22..862 | 9..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:04 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 87..914 | 17..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:04 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849386..20850213 | 17..846 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:48:23 Download gff for
BO14266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849386..20850213 | 17..846 | 99 | | Plus |
BO14266.pep Sequence
Translation from 16 to 862
> BO14266.pep
MWQGHKEKPTSTRSMAREVVHPERPLPPWSRLLEHNAEGCLRKRSGEKEE
HYEVEISNHLWSLWGSTQQVKPGENSSSSESGSERTSPPGQALACCVLAC
CAGSFQSLDSWNSSALDKIMSNGRGYYDESLATRQHWDRTGELCLECLNT
TCFLDGHEFWVDIEKLCTGKLYSRTKSLGSALSKFFGQHLQTGILQLRDQ
ALAFGFIPEFASGGAFFLFHCQARGRPLFKDCESAPYVLRMRKLQQLLYC
MLITLDERRHNVPFRIYKVGCVPRANASFLDH
BO14266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PB | 276 | CG14402-PB | 1..276 | 1..276 | 1504 | 100 | Plus |
| CG14402-PA | 276 | CG14402-PA | 1..276 | 1..276 | 1504 | 100 | Plus |
| CG32436-PA | 1737 | CG32436-PA | 1479..1715 | 23..269 | 385 | 38.6 | Plus |
| CG32462-PA | 284 | CG32462-PA | 37..264 | 11..269 | 299 | 33.1 | Plus |
