Clone BO14267 Report

Search the DGRC for BO14267

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7634-RA
Protein status:BO14267.pep: Imported from assembly
Sequenced Size:1771

Clone Sequence Records

BO14267.3prime Sequence

900 bp (745 high quality bases) assembled on 2006-05-29

> BO14267.3prime
ATGGTCTAGAAAGCTTGCATTGCTATGGCGCACGGACAGGGAACTATACA
CCGATTTTTCGCTTTCGCGCCGGCTATTCGCAAAAATGCTCTGCTTCTTC
ACGATGAATTCCTCCTCATTACAGTGTATACAGGCAGTCAAGAAGTTATG
AATATGCTTTTCTTTCAATTCCTTGGAAATTTTTAGTGCCAGATCTAGAG
CTTCACTGGTTCGCTCGACTTTGTGGAGTGCAGCATTCGCCTTTATTATC
AGTAGGTAGCACAGAAACTGCCAAATGTAGCTATTGCATTTTTTTGCCTC
TTCAATAGACTTTCGGGCACTAAAACAGCATTCGTCAAACCTGTGTGATT
TAAGATGAATCTCTGCCATTTGGTGAAGTAGGTAGGACTTCTCTATAGGG
TACTTTGCGAAATTCATACGGTTCTCGAGTCGGTTTCCCATTAGACGTGA
TTTTGTCAAGGCCGGATCTACTGTTTCCGAGCCTTGGTGCGTAGTTCGAT
CCCCAAATACGAAGTGTTTCACTTCCTTTGACTTGTCCATAGGAAAGCGA
AGCAATCGAAGCAGTGCGTTCTTCTCCGAAAAGCGAAAGTTCTTCGGAAG
CGTGTACTGATCTACGTAGGCAAGCGCCAAAATATTGTACACCTCGTTGA
TGAATTCGAATTTCCAGGGCATAATCCTGTTGGTTTTTTTCACCACGTAA
TCTCCCATAACTTCCTCCACGTAACTGGTGAGTTTTGTTAGACTCTTGGT
TTTTCGAAGGTACCGAATACTACGCAGTGCGGAAATCATGTTTCGTCTTG
TTTGGTACTGAACTCGAAAAAGATATTCCTGGCGAAACTTATCCATCAAC
TTCTTGTTTGTGAACTTTTGGGATCGGATATTGTACATGGGGCTACGGGC

BO14267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-PA 1740 CG7634-RA 856..1737 900..19 4385 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-RA 1892 CG7634-RA 950..1831 900..19 4395 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21566894..21567183 735..446 1450 100 Minus
3L 28110227 3L 21567442..21567724 301..19 1415 100 Minus
3L 28110227 3L 21566674..21566838 900..736 810 99.4 Minus
3L 28110227 3L 21567233..21567379 446..300 735 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:27:45 has no hits.

BO14267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:51 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-PA 856..1740 18..900 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:41 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-PA 856..1740 18..900 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:17:38 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 950..1843 7..900 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:49:32 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 950..1843 7..900 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:49:32 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21566674..21566838 736..900 99 -> Minus
3L 21566894..21567183 446..735 100 -> Minus
3L 21567234..21567379 300..445 100 -> Minus
3L 21567444..21567736 7..299 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:17:38 Download gff for BO14267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21559774..21559938 736..900 99 -> Minus
arm_3L 21559994..21560283 446..735 100 -> Minus
arm_3L 21560334..21560479 300..445 100 -> Minus
arm_3L 21560544..21560836 7..299 98   Minus

BO14267.5prime Sequence

793 bp (769 high quality bases) assembled on 2006-05-29

> BO14267.5prime
GAAGTTATCAGTCGACATGACTTCTATTATACCGCCGGGCTCGTTAGTTC
CGCAGGCGCAGGGCGTAGAAGCAGCCGTACCCGTATGGTTCAAGATGGAC
TGGAGCCCGGAGATAGAGCAGGGCATCTACAAGGACTGGGGAACCTATTA
CAGTCGCCGGCGCAGGGAGAATCTGGGCATGTACTACTTCGACAAAGCCC
TTAAGCTTGGACCTGCAGATTTCACGACTCTGTATCGCCGAAGCCAGAGC
AAAAGGAAGAATGCCCAGGCAGATGGGGCACTTAAGGACAGTTTGGAGGC
AAAACGACTATTGAAAAACTTGCAACGCTATGATGCGCCTATTAATTTGG
AGGTCTGCGATGCATTGTACGAACTAAATCAGCTTGAGAACGCCAAAGCC
GAGCTCCACGACAATACCCGCCTCTTTACTGGAAACAAAACTAAAATGTT
CGAGCAGCGACTGGTGGTGGTGGACGAGAACATTGAAGATGCCTGTGGCC
CTTCGATGACTCAGTACATATCGGACAAGGAGAAACTCATAGTGCACTTG
AAGGAGGTACAGAACAAGTACAAGCCCGATACCAGGCCGCTTTGGAAAAT
TCTGAAGGAACAGGAGAAATGCGATGTCCTGAGCATTCCCGAAATCGAAG
AAGAAATGCTTTCCCCCCTTGAAATTGCGAGGCGAAGTCGTGCTTTCGAC
GTGTTTAACCAGATGTTCATAGATAGGTCTTGGCATGATGTCATATTTCT
CAAGCACGTTCGAAAAAATCCAAACCTTCTCTTGAATCAGTGT

BO14267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-PA 1740 CG7634-RA 1..777 17..793 3885 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-RA 1892 CG7634-RA 95..871 17..793 3885 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21565520..21565809 17..306 1450 100 Plus
3L 28110227 3L 21566087..21566268 469..650 910 100 Plus
3L 28110227 3L 21565867..21566032 306..471 830 100 Plus
3L 28110227 3L 21566326..21566441 650..765 580 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:10:12 has no hits.

BO14267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:52 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-PA 1..777 17..793 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:43 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-PA 1..777 17..793 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:14:03 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..871 17..793 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:48:01 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..871 17..793 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:48:01 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21565520..21565808 17..305 100 -> Plus
3L 21565867..21566030 306..469 100 -> Plus
3L 21566088..21566267 470..649 100 -> Plus
3L 21566326..21566441 650..765 100 -> Plus
3L 21566506..21566533 766..793 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:14:03 Download gff for BO14267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21558620..21558908 17..305 100 -> Plus
arm_3L 21558967..21559130 306..469 100 -> Plus
arm_3L 21559188..21559367 470..649 100 -> Plus
arm_3L 21559426..21559541 650..765 100 -> Plus
arm_3L 21559606..21559633 766..793 100   Plus

BO14267.complete Sequence

1771 bp assembled on 2008-08-14

GenBank Submission: FJ633065

> BO14267.complete
GAAGTTATCAGTCGACATGACTTCTATTATACCGCCGGGCTCGTTAGTTC
CGCAGGCGCAGGGCGTAGAAGCAGCCGTACCCGTATGGTTCAAGATGGAC
TGGAGCCCGGAGATAGAGCAGGGCATCTACAAGGACTGGGGAACCTATTA
CAGTCGCCGGCGCAGGGAGAATCTGGGCATGTACTACTTCGACAAAGCCC
TTAAGCTTGGACCTGCAGATTTCACGACTCTGTATCGCCGAAGCCAGAGC
AAAAGGAAGAATGCCCAGGCAGATGGGGCACTTAAGGACAGTTTGGAGGC
AAAACGACTATTGAAAAACTTGCAACGCTATGATGCGCCTATTAATTTGG
AGGTCTGCGATGCATTGTACGAACTAAATCAGCTTGAGAACGCCAAAGCC
GAGCTCCACGACAATACCCGCCTCTTTACTGGAAACAAAACTAAAATGTT
CGAGCAGCGACTGGTGGTGGTGGACGAGAACATTGAAGATGCCTGTGGCC
CTTCGATGACTCAGTACATATCGGACAAGGAGAAACTCATAGTGCACTTG
AAGGAGGTACAGAACAAGTACAAGCCCGATACCAGGCCGCTTTGGAAAAT
TCTGAAGGAACAGGAGAAATGCGATGTCCTGAGCATTCCCGAAATCGAAG
AAGAAATGCTTTCCCCCCTTGAAATTGCGAGGCGAAGTCGTGCTTTCGAC
GTGTTTAACCAGATGTTCATAGATAGGTCTTGGCATGATGTCATATTTCT
CAAGCACGTTCGAAAAAATCCAAACCTTCTCTTGAATCAGTGTAAGAACT
CCACTGAGTACTTACAAACGCTTTCTACAAAGAAATATGACGAGATCAAA
AGCTTTCTGAAAATTCTGGAAGCCCGTAGCCCCATGTACAATATCCGATA
CCAAAAGTTCACAAACAAGAAGTTGATGGATAAGTTTCGCCAGGAATATC
TTTTTCGAGTTCAGTACCAAACAAGACGAAACATGATTTCCGCACTGCGT
AGTATTCGGTACCTTCGAAAAACCAAGAGTCTAACAAAACTCACCAGTTA
CGTGGAGGAAGTTATGGGAGATTACGTGGTGAAAAAAACCAACAGGATTA
TGCCCTGGAAATTCGAATTCATCAACGAGGTGTACAATATTTTGGCGCTT
GCCTACGTAGATCAGTACACGCTTCCGAAGAACTTTCGCTTTTCGGAGAA
GAACGCACTGCTTCGATTGCTTCGCTTTCCTATGGACAAGTCAAAGGAAG
TGAAACACTTCGTATTTGGGGATCGAACTACGCACCAAGGCTCGGAAACA
GTAGATCCGGCCTTGACAAAATCACGTCTAATGGGAAACCGACTCGAGAA
CCGTATGAATTTCGCAAAGTACCCTATAGAGAAGTCCTACCTACTTCACC
AAATGGCAGAGATTCATCTTAAATCACACAGGTTTGACGAATGCTGTTTT
AGTGCCCGAAAGTCTATTGAAGAGGCAAAAAAATGCAATAGCTACATTTG
GCAGTTTCTGTGCTACCTACTGATAATAAAGGCGAATGCTGCACTCCACA
AAGTCGAGCGAACCAGTGAAGCTCTAGATCTGGCACTAAAAATTTCCAAG
GAATTGAAAGAAAAGCATATTCATAACTTCTTGACTGCCTGTATACACTG
TAATGAGGAGGAATTCATCGTGAAGAAGCAGAGCATTTTTGCGAATAGCC
GGCGCGAAAGCGAAAAATCGGTGTATAGTTCCCTGTCCGTGCGCCATAGC
AATGCAAGCTTTCTAGACCAT

BO14267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-RA 1740 CG7634-PA 1..1737 17..1753 8685 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-RA 1892 CG7634-RA 95..1831 17..1753 8685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21565520..21565809 17..306 1450 100 Plus
3L 28110227 3L 21566894..21567183 1037..1326 1450 100 Plus
3L 28110227 3L 21567442..21567724 1471..1753 1415 100 Plus
3L 28110227 3L 21566087..21566268 469..650 910 100 Plus
3L 28110227 3L 21566656..21566838 854..1036 900 99.5 Plus
3L 28110227 3L 21565867..21566032 306..471 830 100 Plus
3L 28110227 3L 21567233..21567379 1326..1472 735 100 Plus
3L 28110227 3L 21566326..21566441 650..765 580 100 Plus
3L 28110227 3L 21566506..21566599 766..859 470 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:14:35 has no hits.

BO14267.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:41:26 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..1843 17..1765 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:11 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..1831 17..1755 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:02:16 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..1831 17..1755 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:09 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
CG7634-RA 95..1831 17..1755 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:09 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21567444..21567724 1473..1755 99   Plus
3L 21567234..21567379 1327..1472 100 -> Plus
3L 21565520..21565808 17..305 100 -> Plus
3L 21565867..21566030 306..469 100 -> Plus
3L 21566088..21566267 470..649 100 -> Plus
3L 21566326..21566441 650..765 100 -> Plus
3L 21566506..21566599 766..859 100 -> Plus
3L 21566662..21566838 860..1036 100 -> Plus
3L 21566894..21567183 1037..1326 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:11 Download gff for BO14267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21558620..21558908 17..305 100 -> Plus
arm_3L 21558967..21559130 306..469 100 -> Plus
arm_3L 21559188..21559367 470..649 100 -> Plus
arm_3L 21559426..21559541 650..765 100 -> Plus
arm_3L 21559606..21559699 766..859 100 -> Plus
arm_3L 21559762..21559938 860..1036 100 -> Plus
arm_3L 21559994..21560283 1037..1326 100 -> Plus
arm_3L 21560334..21560479 1327..1472 100 -> Plus
arm_3L 21560544..21560824 1473..1755 99   Plus

BO14267.pep Sequence

Translation from 16 to 1771

> BO14267.pep
MTSIIPPGSLVPQAQGVEAAVPVWFKMDWSPEIEQGIYKDWGTYYSRRRR
ENLGMYYFDKALKLGPADFTTLYRRSQSKRKNAQADGALKDSLEAKRLLK
NLQRYDAPINLEVCDALYELNQLENAKAELHDNTRLFTGNKTKMFEQRLV
VVDENIEDACGPSMTQYISDKEKLIVHLKEVQNKYKPDTRPLWKILKEQE
KCDVLSIPEIEEEMLSPLEIARRSRAFDVFNQMFIDRSWHDVIFLKHVRK
NPNLLLNQCKNSTEYLQTLSTKKYDEIKSFLKILEARSPMYNIRYQKFTN
KKLMDKFRQEYLFRVQYQTRRNMISALRSIRYLRKTKSLTKLTSYVEEVM
GDYVVKKTNRIMPWKFEFINEVYNILALAYVDQYTLPKNFRFSEKNALLR
LLRFPMDKSKEVKHFVFGDRTTHQGSETVDPALTKSRLMGNRLENRMNFA
KYPIEKSYLLHQMAEIHLKSHRFDECCFSARKSIEEAKKCNSYIWQFLCY
LLIIKANAALHKVERTSEALDLALKISKELKEKHIHNFLTACIHCNEEEF
IVKKQSIFANSRRESEKSVYSSLSVRHSNASFLDH

BO14267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG7634-PA 579 CG7634-PA 1..579 1..579 3014 100 Plus
CG15128-PA 580 CG15128-PA 1..564 1..569 1462 51 Plus
r-cup-PA 594 CG10998-PA 20..578 24..581 1026 39.5 Plus
wa-cup-PB 580 CG10113-PB 17..548 16..554 1024 41.7 Plus
p-cup-PA 538 CG12993-PA 14..534 77..581 663 30.9 Plus