Clone BO14269 Report

Search the DGRC for BO14269

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG8526-RA
Protein status:BO14269.pep: Imported from assembly
Sequenced Size:1849

Clone Sequence Records

BO14269.3prime Sequence

868 bp (750 high quality bases) assembled on 2006-05-29

> BO14269.3prime
ATGGTCTAGAAAGCTTGCTTGCGTGCAGGAACACGGATCTTTCTTGGCCA
GCTCCTTCTCCTTGAAACGCATCAGGGTCAGGATGTGGGCATGATTGGCT
GCCTTGGCGTAGTCGATTGGCGACATGCCCAGCTCATCCTTGATGTAGGG
ATTCTCGTAGTGCGGCAGCAGATAGTCTACCACCTCGTGATTACCTAACT
GGCAGGCGTAGTGCAGAGCCGTTCGTCCAGTCCGATCAGCCAGCGTGAGA
TTGGCTCCGGCTAGCCGAAATGACTCCAATCGCTTGATCTTGCCCCGCTC
GGTAAGGGCACGTAGTAGCTCCGCCTGGACCAGCGGCTGATCGTTCAGCT
TGGCGCCGTTCTTGAGCAGAGCGTTGATTATATCATGGTTGTCCGTGTCG
ATGGCCTCGTGCAACGGCGTGCGGTTGAATCGATCGTGGACATTTACCGG
ACAGCCGGCGGAAATTAGAAAGCAAACGCAGTTCAGTTTGCCCAGGAAGC
AGGCCAGGTGCATGGCGGAGCGACCATCGCAGTTGGTGTCGCACAGATTG
GCGCCGTACTGCTTAAGATCGCCCAACTTGTGGACATCACCTTCGGTGAC
CGCGGCCGCCACCAAAGCGGGATAGAATGTGGAGCACATCTGCTGCCGTT
CCATCGCCGTCGACATGTGCAATGTGCGGGCCACGCCCTCGATCAGATCA
ATGTCGTTAATCTTGGCAACCTTATTGGTGGTCAGCTCTCCGCGCAAACT
TAGTAGCATCACCTTCTTCTTTGTGGGAATGTCCCACTCCGGCTTGGACA
GCACATAAGCCAGTTTGGTAAAGGCTGCCTCCTGAGTCATATCGTAGCCG
GGTATTACGCCCACTTCC

BO14269.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-PA 1818 CG8526-RA 966..1815 868..19 4175 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-RB 2066 CG8526-RB 1163..2012 868..19 4205 99.6 Minus
CG8526-RA 2069 CG8526-RA 1166..2015 868..19 4205 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9802558..9803407 868..19 4205 99.6 Minus
Blast to na_te.dros performed on 2015-02-10 20:58:49 has no hits.

BO14269.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:55 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-PA 966..1818 18..868 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:47 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-PA 966..1818 18..868 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:54:06 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 1166..2022 13..868 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:05 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 1166..2022 13..868 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:05 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9802558..9803414 13..868 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:54:06 Download gff for BO14269.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5628280..5629136 13..868 99   Minus

BO14269.5prime Sequence

909 bp (838 high quality bases) assembled on 2006-05-29

> BO14269.5prime
GAAGTTATCAGTCGACATGCCGGCGGCGAAGTGCGGTTGTTTGAAGAAGG
AGGCTCGCGTCCATGTCATCTACGTGGGTGGAACCATCGGAATGATCCGC
AACGAGTCCGGAGTACTGCACACCGCGCCCAAGGTGCTGGCTCGGCAGCT
TCAAGAGTTTCCCAGCTGCCACGACAGGAATTACACCAGCAAGGATAATG
ATGGTCCCATGATGGTGCTACCCGCAGTGTCTGGAGCTCCGTATAGAGTC
CTTTACGATTTGATTGAGTTCTGCCCACTGATGGACTCCAGCTGCATGGG
CTTCTGCGACTGGAAGCGCATTGCCAACGAAGTGGGAAAGACATACAAGT
CCTACGACGGCTTTGTGATCCTCCATGGAACGGATACCCTAGCCTACTCC
GCCTCGGCACTAGCGTTCATGCTTGAGAGCCTGAACAAGCCCGTGGTATT
CACTGGGGCACAGATTCCGATCTTTGAAGCCCGCAGCGATGGGCGGGAGA
ACTTCTTGGGCGCACTTCTCATAGCAGGAAATTACAGTATACCCGAAGTG
CTGGTCTTCTTCGGCAACAAGATTCTACGTGGCTGTCGCTCCACGAAGCT
CAATTCTGACTCTTTTCACGCACTGGACTCACCAAATTTTGCACCATTGG
GTCGGGCGAGTGTCAACATTGAGATCAACAGCCGCCAAATCTTCCGACCG
TGCAATATTAAACCATTTTCACTTCATTCGGAACTCGAANAGAACGTGGC
GCTGCTGCGTATTTACCCGGGAATAAGTGCCAGTGTGGTGCAGGCAATCC
TGAAAGAGCCAACGAAAGGTGTTGTCCTCCAGACCTTTGGGGCCGGCAAT
TTTCCGGTTAATCGTGAGGACTTGCTGGACGAACTGAGGGAGGCGGTTCA
CAGAGGCGT

BO14269.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-PA 1818 CG8526-RA 1..893 17..909 4446 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-RA 2069 CG8526-RA 201..1093 17..909 4454 99.9 Plus
CG8526-RB 2066 CG8526-RB 201..1090 17..909 4399 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9801914..9802485 338..909 2849 99.8 Plus
3R 32079331 3R 9801627..9801852 112..337 1130 100 Plus
3R 32079331 3R 9801480..9801576 17..113 485 100 Plus
Blast to na_te.dros performed on 2015-02-02 08:29:39 has no hits.

BO14269.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:22:56 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:48 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:37 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 201..1093 17..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:21:01 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 201..1093 17..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:21:01 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9801480..9801576 17..113 100 -> Plus
3R 9801629..9801852 114..337 100 -> Plus
3R 9801914..9802485 338..909 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:37 Download gff for BO14269.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5627202..5627298 17..113 100 -> Plus
arm_3R 5627351..5627574 114..337 100 -> Plus
arm_3R 5627636..5628207 338..909 99   Plus

BO14269.complete Sequence

1849 bp assembled on 2008-08-15

GenBank Submission: FJ633067

> BO14269.complete
GAAGTTATCAGTCGACATGCCGGCGGCGAAGTGCGGTTGTTTGAAGAAGG
AGGCTCGCGTCCATGTCATCTACGTGGGTGGAACCATCGGAATGATCCGC
AACGAGTCCGGAGTACTGCACACCGCGCCCAAGGTGCTGGCTCGGCAGCT
TCAAGAGTTTCCCAGCTGCCACGACAGGAATTACACCAGCAAGGATAATG
ATGGTCCCATGATGGTGCTACCCGCAGTGTCTGGAGCTCCGTATAGAGTC
CTTTACGATTTGATTGAGTTCTGCCCACTGATGGACTCCAGCTGCATGGG
CTTCTGCGACTGGAAGCGCATTGCCAACGAAGTGGGAAAGACATACAAGT
CCTACGACGGCTTTGTGATCCTCCATGGAACGGATACCCTAGCCTACTCC
GCCTCGGCACTAGCGTTCATGCTTGAGAGCCTGAACAAGCCCGTGGTATT
CACTGGGGCACAGATTCCGATCTTTGAAGCCCGCAGCGATGGGCGGGAGA
ACTTCTTGGGCGCACTTCTCATAGCAGGAAATTACAGTATACCCGAAGTG
CTGGTCTTCTTCGGCAACAAGATTCTACGTGGCTGTCGCTCCACGAAGCT
CAATTCTGACTCTTTTCACGCACTGGACTCACCAAATTTTGCACCATTGG
GTCGGGCGAGTGTCAACATTGAGATCAACAGCCGCCAAATCTTCCGACCG
TGCAATATTAAACCATTTTCACTTCATTCGGAACTCGAAAAGAACGTGGC
GCTGCTGCGTATTTACCCGGGAATAAGTGCCAGTGTGGTGCAGGCAATCC
TGAAAGAGCCAACGAAAGGTGTTGTCCTCCAGACCTTTGGGGCCGGCAAT
TTTCCGGTTAATCGTGAGGACTTGCTGGACGAACTGAGGGAGGCGGTTCA
CAGAGGCGTTATTATTGTCAACATTACGCAGTGCTCGGCGGGCATGGTGG
CCAACATTTACGAGACAAGCCAGGGTCTGATGGAAGTGGGCGTAATACCC
GGCTACGATATGACTCAGGAGGCAGCCTTTACCAAACTGGCCTATGTGCT
GTCCAAGCCGGAGTGGGACATTCCCAACAAGAAGAAGGTGATGCTACTAA
GTTTGCGCGGAGAGCTGACCACCAATAAGGTTGCCAAGATTAACGACATT
GATCTGATCGAGGGCGTGGCCCGCACATTGCACATGTCGACGGCGATGGA
ACGGCAGCAGATGTGCTCCACATTCTATCCCGCTTTGGTGGCGGCCGCGG
TCACCGAAGGTGATGTCCACAAGTTGGGCGATCTTAAGCAGTACGGCGCC
AATCTGTGCGACACCAACTGCGATGGTCGCTCCGCCATGCACCTGGCCTG
CTTCCTGGGCAAACTGAACTGCGTTTGCTTTCTAATTTCCGCCGGCTGTC
CGGTAAATGTCCACGATCGATTCAACCGCACGCCGTTGCACGAGGCCATC
GACACGGACAACCATGATATAATCAACGCTCTGCTCAAGAACGGCGCCAA
GCTGAACGATCAGCCGCTGGTCCAGGCGGAGCTACTACGTGCCCTTACCG
AGCGGGGCAAGATCAAGCGATTGGAGTCATTTCGGCTAGCCGGAGCCAAT
CTCACGCTGGCTGATCGGACTGGACGAACGGCTCTGCACTACGCCTGCCA
GTTAGGTAATCACGAGGTGGTAGACTATCTGCTGCCGCACTACGAGAATC
CCTACATCAAGGATGAGCTGGGCATGTCGCCAATCGACTACGCCAAGGCA
GCCAATCATGCCCACATCCTGACCCTGATGCGTTTCAAGGAGAAGGAGCT
GGCCAAGAAAGATCCGTGTTCCTGCACGCAAGCAAGCTTTCTAGACCAT

BO14269.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-RA 1818 CG8526-PA 1..1815 17..1831 9075 100 Plus
CG8526-RB 1815 CG8526-PB 1..1812 17..1831 8995 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-RA 2069 CG8526-RA 201..2015 17..1831 9075 100 Plus
CG8526-RB 2066 CG8526-RB 201..2012 17..1831 8995 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9801914..9803407 338..1831 7470 100 Plus
3R 32079331 3R 9801627..9801852 112..337 1130 100 Plus
3R 32079331 3R 9801480..9801576 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:48:34 has no hits.

BO14269.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:56:05 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 143..1964 17..1837 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:55 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 201..2015 17..1833 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:04:02 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 143..1957 17..1833 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:55 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
CG8526-RA 201..2015 17..1833 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:55 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9801629..9801852 114..337 100 -> Plus
3R 9801480..9801576 17..113 100 -> Plus
3R 9801914..9803407 338..1833 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:55 Download gff for BO14269.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5627202..5627298 17..113 100 -> Plus
arm_3R 5627351..5627574 114..337 100 -> Plus
arm_3R 5627636..5629129 338..1833 99   Plus

BO14269.pep Sequence

Translation from 16 to 1849

> BO14269.pep
MPAAKCGCLKKEARVHVIYVGGTIGMIRNESGVLHTAPKVLARQLQEFPS
CHDRNYTSKDNDGPMMVLPAVSGAPYRVLYDLIEFCPLMDSSCMGFCDWK
RIANEVGKTYKSYDGFVILHGTDTLAYSASALAFMLESLNKPVVFTGAQI
PIFEARSDGRENFLGALLIAGNYSIPEVLVFFGNKILRGCRSTKLNSDSF
HALDSPNFAPLGRASVNIEINSRQIFRPCNIKPFSLHSELEKNVALLRIY
PGISASVVQAILKEPTKGVVLQTFGAGNFPVNREDLLDELREAVHRGVII
VNITQCSAGMVANIYETSQGLMEVGVIPGYDMTQEAAFTKLAYVLSKPEW
DIPNKKKVMLLSLRGELTTNKVAKINDIDLIEGVARTLHMSTAMERQQMC
STFYPALVAAAVTEGDVHKLGDLKQYGANLCDTNCDGRSAMHLACFLGKL
NCVCFLISAGCPVNVHDRFNRTPLHEAIDTDNHDIINALLKNGAKLNDQP
LVQAELLRALTERGKIKRLESFRLAGANLTLADRTGRTALHYACQLGNHE
VVDYLLPHYENPYIKDELGMSPIDYAKAANHAHILTLMRFKEKELAKKDP
CSCTQASFLDH

BO14269.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG8526-PA 605 CG8526-PA 1..605 1..605 3160 100 Plus
CG8526-PB 604 CG8526-PB 1..604 1..605 3143 99.8 Plus
CG6428-PA 631 CG6428-PA 48..630 11..589 1549 51.5 Plus
Ank-PE 1549 CG1651-PE 460..681 360..588 190 26.6 Plus
Ank-PD 1549 CG1651-PD 460..681 360..588 190 26.6 Plus