Clone Sequence Records
BO14282.3prime Sequence
793 bp (686 high quality bases) assembled on 2006-05-29
> BO14282.3prime
ATGGTCTAGAAAGCTTGCAATGGAGAATCGCGTCCAGCGCTCCACGAGAC
TGGGTCGCGGCGAGGCCCTGTACCGTTCGTCGAAGATGGGGCAGAACTTC
TCCGGGAACCGCTGCTGCAGGCAGCGAATGACGGTGCCCGTGAGATAGAA
TCGCGGTGGCCAGCGGCACTCGCACGGCGGGATGCAGGTGGAGCACTGCG
CCTGCAAGGCGTTCCACTTGCTCATGGTGGTTTCCAGCATGGGCGGCAGG
CACTCCAATCGCCACGGCAGCCGGAGATCCCGTGCGGTCCAGTCGCAGTC
GCACGGCGGAATGCAGGTCATGCACATGAGTTCCTCGGGTTCCATGTCCT
CGGGTTCCTCCGGCGGCTTTGCCGCCTCCTCGCACTTGTACATCGTGAAG
CGCGGTACCATGCCGATGAGCTCCTTGTACTTGCGCTCCTGCTCGTGGCG
CAGCCACAGGTACAGTAGATCCCAGTGGTCCAGGTTGCGGGCCCGCTCCC
GTAGCATCTGCATCCGTCGGTAGAGATCACTCCTGCGCACCTCGTCATAG
TTTACTCCGGTCTGCGTGTGGAACAGCAGGTACAGCTCATTGGGCTTCTC
GTCCGGCAGCGAGATGCTGGATGAGAACTTCGTCAGCTCGAAGTGGAAGA
GCATACGGATGCCATAGGATATGTGACGGATGTGATCGAAATTCTTGATG
TTCATCGCACACAGAGCGGAGGCGTCCAGGAGCAGTACCTTGCGACCCGT
GATCATGTTCACCCGGAAAGTGTTCATGTACTGTGGATATCCG
BO14282.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-PA | 1050 | CG15625-RA | 273..1047 | 793..19 | 3850 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:37:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-RA | 1222 | CG15625-RA | 355..1129 | 793..19 | 3860 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:37:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4890428..4891184 | 775..19 | 3770 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:37:57 has no hits.
BO14282.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:19 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-PA | 273..1050 | 16..793 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:20 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-PA | 273..1050 | 16..793 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:55:48 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 355..1135 | 13..793 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:23 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 355..1135 | 13..793 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:23 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4890349..4890367 | 775..793 | 100 | -> | Minus |
2L | 4890429..4891190 | 13..774 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:55:48 Download gff for
BO14282.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4890349..4890367 | 775..793 | 100 | -> | Minus |
arm_2L | 4890429..4891190 | 13..774 | 99 | | Minus |
BO14282.5prime Sequence
804 bp (690 high quality bases) assembled on 2006-05-29
> BO14282.5prime
GAAGTTATCAGTCGACATGCCCTATCTATATGGAATAGCGGACACCAAGT
TCCTCCACCAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCA
CCCACCAAGTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGA
TGGGGACGATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGG
AACTGAGCATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAA
TGGGATGACATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACA
GTACATGAACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGC
TCCTGGACGCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCAC
ATCCGTCACATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGAC
GAAGTTCTCATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGT
ACCTGCTGTTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGG
AGTGATCTCTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCT
GGACCACTGGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAACGCA
AGTACAAGGAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGC
GAGGAGGCGGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGA
ACTCATGTGCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCAC
GGGA
BO14282.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-PA | 1050 | CG15625-RA | 1..788 | 17..804 | 3915 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-RA | 1222 | CG15625-RA | 83..870 | 17..804 | 3925 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:32:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4890428..4890925 | 307..804 | 2475 | 99.8 | Plus |
2L | 23513712 | 2L | 4890077..4890367 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 08:32:36 has no hits.
BO14282.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:20 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-PA | 1..787 | 17..803 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:21 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-PA | 1..787 | 17..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:53 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..869 | 17..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:21:34 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..869 | 17..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:21:34 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4890077..4890367 | 17..307 | 100 | -> | Plus |
2L | 4890429..4890924 | 308..803 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:53 Download gff for
BO14282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4890077..4890367 | 17..307 | 100 | -> | Plus |
arm_2L | 4890429..4890924 | 308..803 | 99 | | Plus |
BO14282.complete Sequence
1081 bp assembled on 2006-10-11
GenBank Submission: FJ633073
> BO14282.complete
GAAGTTATCAGTCGACATGCCCTATCTATATGGAATAGCGGACACCAAGT
TCCTCCACCAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCA
CCCACCAAGTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGA
TGGGGACGATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGG
AACTGAGCATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAA
TGGGATGACATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACA
GTACATGAACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGC
TCCTGGACGCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCAC
ATCCGTCACATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGAC
GAAGTTCTCATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGT
ACCTGCTGTTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGG
AGTGATCTCTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCT
GGACCACTGGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAGCGCA
AGTACAAGGAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGC
GAGGAGGCGGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGA
ACTCATGTGCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCAC
GGGATCTCCGGCTGCCGTGGCGATTGGAGTGCCTGCCGCCCATGCTGGAA
ACCACCATGAGCAAGTGGAACGCCTTGCAGGCGCAGTGCTCCACCTGCAT
CCCGCCGTGCGAGTGCCGCTGGCCACCGCGATTCTATCTCACGGGCACCG
TCATTCGCTGCCTGCAGCAGCGGTTCCCGGAGAAGTTCTGCCCCATCTTC
GACGAACGGTACAGGGCCTCGCCGCGACCCAGTCTCGTGGAGCGCTGGAC
GCGATTCTCCATTGCAAGCTTTCTAGACCAT
BO14282.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:28:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-RA | 1050 | CG15625-PA | 1..1047 | 17..1063 | 5235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:28:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-RA | 1222 | CG15625-RA | 83..1129 | 17..1063 | 5235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:28:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4890428..4891184 | 307..1063 | 3785 | 100 | Plus |
2L | 23513712 | 2L | 4890077..4890367 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:28:56 has no hits.
BO14282.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:15 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 1..1050 | 17..1066 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:49 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..1135 | 17..1069 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:35 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..1129 | 17..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:16 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..1135 | 17..1069 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:28 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15625-RA | 83..1129 | 17..1065 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:28 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4890077..4890367 | 17..307 | 100 | -> | Plus |
2L | 4890429..4891184 | 308..1065 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:35 Download gff for
BO14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4890077..4890367 | 17..307 | 100 | -> | Plus |
arm_2L | 4890429..4891184 | 308..1065 | 99 | | Plus |
BO14282.pep Sequence
Translation from 16 to 1081
> BO14282.pep
MPYLYGIADTKFLHQKVKKKTKIRSDMAPTKFQRNEFLKGCPKYDGDDIP
IQFRTTPDSLVELSIIVVDKLPLPSIFEWDDMDIRRWINGYGYPQYMNTF
RVNMITGRKLLLLDASALCAMNIKNFDHIRHISYGIRMLFHFELTKFSSS
ISLPDEKPNELYLLFHTQTGVNYDEVRRSDLYRRMQMLRERARNLDHWDL
LYLWLRHEQERKYKELIGMVPRFTMYKCEEAAKPPEEPEDMEPEELMCMT
CIPPCDCDWTARDLRLPWRLECLPPMLETTMSKWNALQAQCSTCIPPCEC
RWPPRFYLTGTVIRCLQQRFPEKFCPIFDERYRASPRPSLVERWTRFSIA
SFLDH
BO14282.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15625-PA | 349 | CG15625-PA | 1..349 | 1..349 | 1926 | 100 | Plus |
CG13996-PA | 256 | CG13996-PA | 51..245 | 43..242 | 389 | 37 | Plus |