Clone BO14282 Report

Search the DGRC for BO14282

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:142
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG15625-RA
Protein status:BO14282.pep: validated full length
Sequenced Size:1081

Clone Sequence Records

BO14282.3prime Sequence

793 bp (686 high quality bases) assembled on 2006-05-29

> BO14282.3prime
ATGGTCTAGAAAGCTTGCAATGGAGAATCGCGTCCAGCGCTCCACGAGAC
TGGGTCGCGGCGAGGCCCTGTACCGTTCGTCGAAGATGGGGCAGAACTTC
TCCGGGAACCGCTGCTGCAGGCAGCGAATGACGGTGCCCGTGAGATAGAA
TCGCGGTGGCCAGCGGCACTCGCACGGCGGGATGCAGGTGGAGCACTGCG
CCTGCAAGGCGTTCCACTTGCTCATGGTGGTTTCCAGCATGGGCGGCAGG
CACTCCAATCGCCACGGCAGCCGGAGATCCCGTGCGGTCCAGTCGCAGTC
GCACGGCGGAATGCAGGTCATGCACATGAGTTCCTCGGGTTCCATGTCCT
CGGGTTCCTCCGGCGGCTTTGCCGCCTCCTCGCACTTGTACATCGTGAAG
CGCGGTACCATGCCGATGAGCTCCTTGTACTTGCGCTCCTGCTCGTGGCG
CAGCCACAGGTACAGTAGATCCCAGTGGTCCAGGTTGCGGGCCCGCTCCC
GTAGCATCTGCATCCGTCGGTAGAGATCACTCCTGCGCACCTCGTCATAG
TTTACTCCGGTCTGCGTGTGGAACAGCAGGTACAGCTCATTGGGCTTCTC
GTCCGGCAGCGAGATGCTGGATGAGAACTTCGTCAGCTCGAAGTGGAAGA
GCATACGGATGCCATAGGATATGTGACGGATGTGATCGAAATTCTTGATG
TTCATCGCACACAGAGCGGAGGCGTCCAGGAGCAGTACCTTGCGACCCGT
GATCATGTTCACCCGGAAAGTGTTCATGTACTGTGGATATCCG

BO14282.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-PA 1050 CG15625-RA 273..1047 793..19 3850 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-RA 1222 CG15625-RA 355..1129 793..19 3860 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:37:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4890428..4891184 775..19 3770 99.9 Minus
Blast to na_te.dros performed on 2015-02-12 18:37:57 has no hits.

BO14282.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:19 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-PA 273..1050 16..793 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:20 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-PA 273..1050 16..793 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:55:48 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 355..1135 13..793 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:23 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 355..1135 13..793 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:23 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 4890349..4890367 775..793 100 -> Minus
2L 4890429..4891190 13..774 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:55:48 Download gff for BO14282.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4890349..4890367 775..793 100 -> Minus
arm_2L 4890429..4891190 13..774 99   Minus

BO14282.5prime Sequence

804 bp (690 high quality bases) assembled on 2006-05-29

> BO14282.5prime
GAAGTTATCAGTCGACATGCCCTATCTATATGGAATAGCGGACACCAAGT
TCCTCCACCAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCA
CCCACCAAGTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGA
TGGGGACGATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGG
AACTGAGCATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAA
TGGGATGACATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACA
GTACATGAACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGC
TCCTGGACGCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCAC
ATCCGTCACATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGAC
GAAGTTCTCATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGT
ACCTGCTGTTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGG
AGTGATCTCTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCT
GGACCACTGGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAACGCA
AGTACAAGGAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGC
GAGGAGGCGGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGA
ACTCATGTGCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCAC
GGGA

BO14282.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-PA 1050 CG15625-RA 1..788 17..804 3915 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-RA 1222 CG15625-RA 83..870 17..804 3925 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4890428..4890925 307..804 2475 99.8 Plus
2L 23513712 2L 4890077..4890367 17..307 1455 100 Plus
Blast to na_te.dros performed on 2015-02-02 08:32:36 has no hits.

BO14282.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:20 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-PA 1..787 17..803 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:21 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-PA 1..787 17..803 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:48:53 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..869 17..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:21:34 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..869 17..803 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:21:34 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4890077..4890367 17..307 100 -> Plus
2L 4890429..4890924 308..803 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:48:53 Download gff for BO14282.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4890077..4890367 17..307 100 -> Plus
arm_2L 4890429..4890924 308..803 99   Plus

BO14282.complete Sequence

1081 bp assembled on 2006-10-11

GenBank Submission: FJ633073

> BO14282.complete
GAAGTTATCAGTCGACATGCCCTATCTATATGGAATAGCGGACACCAAGT
TCCTCCACCAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCA
CCCACCAAGTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGA
TGGGGACGATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGG
AACTGAGCATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAA
TGGGATGACATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACA
GTACATGAACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGC
TCCTGGACGCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCAC
ATCCGTCACATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGAC
GAAGTTCTCATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGT
ACCTGCTGTTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGG
AGTGATCTCTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCT
GGACCACTGGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAGCGCA
AGTACAAGGAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGC
GAGGAGGCGGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGA
ACTCATGTGCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCAC
GGGATCTCCGGCTGCCGTGGCGATTGGAGTGCCTGCCGCCCATGCTGGAA
ACCACCATGAGCAAGTGGAACGCCTTGCAGGCGCAGTGCTCCACCTGCAT
CCCGCCGTGCGAGTGCCGCTGGCCACCGCGATTCTATCTCACGGGCACCG
TCATTCGCTGCCTGCAGCAGCGGTTCCCGGAGAAGTTCTGCCCCATCTTC
GACGAACGGTACAGGGCCTCGCCGCGACCCAGTCTCGTGGAGCGCTGGAC
GCGATTCTCCATTGCAAGCTTTCTAGACCAT

BO14282.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-RA 1050 CG15625-PA 1..1047 17..1063 5235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:28:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-RA 1222 CG15625-RA 83..1129 17..1063 5235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4890428..4891184 307..1063 3785 100 Plus
2L 23513712 2L 4890077..4890367 17..307 1455 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:28:56 has no hits.

BO14282.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:15 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 17..1066 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:49 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..1135 17..1069 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:35 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..1129 17..1065 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:16 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..1135 17..1069 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:28 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 83..1129 17..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:28 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4890077..4890367 17..307 100 -> Plus
2L 4890429..4891184 308..1065 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:35 Download gff for BO14282.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4890077..4890367 17..307 100 -> Plus
arm_2L 4890429..4891184 308..1065 99   Plus

BO14282.pep Sequence

Translation from 16 to 1081

> BO14282.pep
MPYLYGIADTKFLHQKVKKKTKIRSDMAPTKFQRNEFLKGCPKYDGDDIP
IQFRTTPDSLVELSIIVVDKLPLPSIFEWDDMDIRRWINGYGYPQYMNTF
RVNMITGRKLLLLDASALCAMNIKNFDHIRHISYGIRMLFHFELTKFSSS
ISLPDEKPNELYLLFHTQTGVNYDEVRRSDLYRRMQMLRERARNLDHWDL
LYLWLRHEQERKYKELIGMVPRFTMYKCEEAAKPPEEPEDMEPEELMCMT
CIPPCDCDWTARDLRLPWRLECLPPMLETTMSKWNALQAQCSTCIPPCEC
RWPPRFYLTGTVIRCLQQRFPEKFCPIFDERYRASPRPSLVERWTRFSIA
SFLDH

BO14282.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-PA 349 CG15625-PA 1..349 1..349 1926 100 Plus
CG13996-PA 256 CG13996-PA 51..245 43..242 389 37 Plus