Clone Sequence Records
BO14286.3prime Sequence
752 bp (751 high quality bases) assembled on 2006-05-29
> BO14286.3prime
ATGGTCTAGAAAGCTTGCTTCATCGACGCTCTCCATCGGCGACTGGACAT
TCGCATTGGGTCCACCGGCGGCGGCATATGCCTTCTCCATAGCGGCCTGC
GACTCCCGCTTCGGCGTGACCCGCTTGTGCTGTGTGGTGAAGTTTACGTT
GATCCGTCCGCTGCCACGAACGGAGCTCATGGGCGGACGCATGAGGGGCG
TGGCCAGGCGACTGGCGCCTCCCGACGATGGCGGATACTGCAGTGTATCT
GGCTTGGGCGTAGCTTTCGCCTCCTTGCGTACATCCACTACCAGAGCTTC
GCGCACCGAGTTCTCCTGGAACTGCTTCACACGCTCGCGCATATCTGTCT
CCCGCTGGATCTCCTTCTGGATCTCCGCCCGCCGCTTGTTATCGTAACGT
TCCAGTGCCTTTTCATCCCGCTTCTTGTTGCGCTCCACGATGAGGTCGGC
GATCTCTAGGCGCTTCTGCATGAGTGCCTCCTTGTCCAGCTTCTGGAACA
TCTCAGGCCATAAGCCCTTCTCTTTCTTAACCAGCACAATGCGGGCTTCG
TTCTTAAAAATGCGACAAAAGCTGGCCATCTCGTCGATCTCCTGGGCCAG
ATGACGCTCAAAGAAGATGGGTGGATTGTTGAACTTTAAGTACTGCGGAA
GGAGAACAACGTCCGGCTTGCGGGTTACCAGACGATTGAGTTCGATGGAG
ATCTTGATGTCCTCCTCTGTCTGCGAAATCTGTACCATGTCGACTGATAA
CT
BO14286.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-PA | 723 | CG14921-RA | 1..720 | 738..19 | 3600 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-RA | 953 | CG14921-RA | 129..849 | 739..19 | 3605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11120746..11121301 | 19..574 | 2780 | 100 | Plus |
| 2L | 23513712 | 2L | 11121419..11121586 | 572..739 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:02:26 has no hits.
BO14286.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:20 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-PA | 1..723 | 15..738 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:23 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-PA | 1..723 | 15..738 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:47:59 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 94..826 | 10..743 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:03:36 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 125..857 | 10..743 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:03:36 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11120738..11121298 | 10..571 | 99 | <- | Plus |
| 2L | 11121419..11121590 | 572..743 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:47:59 Download gff for
BO14286.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11120738..11121298 | 10..571 | 99 | <- | Plus |
| arm_2L | 11121419..11121590 | 572..743 | 98 | | Plus |
BO14286.5prime Sequence
752 bp (751 high quality bases) assembled on 2006-05-29
> BO14286.5prime
GAAGTTATCAGTCGACATGGTACAGATTTCGCAGACAGAGGAGGACATCA
AGATCTCCATCGAACTCAATCGTCTGGTAACCCGCAAGCCGGACGTTGTT
CTCCTTCCGCAGTACTTAAAGTTCAACAATCCACCCATCTTCTTTGAGCG
TCATCTGGCCCAGGAGATCGACGAGATGGCCAGCTTTTGTCGCATTTTTA
AGAACGAAGCCCGCATTGTGCTGGTTAAGAAAGAGAAGGGCTTATGGCCT
GAGATGTTCCAGAAGCTGGACAAGGAGGCACTCATGCAGAAGCGCCTAGA
GATCGCCGACCTCATCGTGGAGCGCAACAAGAAGCGGGATGAAAAGGCAC
TGGAACGTTACGATAACAAGCGGCGGGCGGAGATCCAGAAGGAGATCCAG
CGGGAGACAGATATGCGCGAGCGTGTGAAGCAGTTCCAGGAGAACTCGGT
GCGCGAAGCTCTGGTAGTGGATGTACGCAAGGAGGCGAAAGCTACGCCCA
AGCCAGATACACTGCAGTATCCGCCATCGTCGGGAGGCGCCAGTCGCCTG
GCCACGCCCCTCATGCGTCCGCCCATGAGCTCCGTTCGTGGCAGCGGACG
GATCAACGTAAACTTCACCACACAGCACAAGCGGGTCACGCCGAAGCGGG
AGTCGCAGGCCGCTATGGAGAAGGCATATGCCGCCGCCGGTGGACCCAAT
GCGAATGTCCAGTCGCCGATGGAGAGCGTCGATGAAGCAAGCTTTCTAGA
CC
BO14286.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-PA | 723 | CG14921-RA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-RA | 953 | CG14921-RA | 129..849 | 16..736 | 3605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11120746..11121301 | 736..181 | 2780 | 100 | Minus |
| 2L | 23513712 | 2L | 11121419..11121586 | 183..16 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 12:56:58 has no hits.
BO14286.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:21 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-PA | 1..723 | 17..740 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:24 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-PA | 1..723 | 17..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:13:10 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 94..826 | 12..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:29:23 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 125..857 | 12..745 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:29:23 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11121419..11121590 | 12..183 | 98 | | Minus |
| 2L | 11120738..11121298 | 184..745 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:13:10 Download gff for
BO14286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11120738..11121298 | 184..745 | 99 | <- | Minus |
| arm_2L | 11121419..11121590 | 12..183 | 98 | | Minus |
BO14286.complete Sequence
754 bp assembled on 2006-10-11
GenBank Submission: FJ633074
> BO14286.complete
GAAGTTATCAGTCGACATGGTACAGATTTCGCAGACAGAGGAGGACATCA
AGATCTCCATCGAACTCAATCGTCTGGTAACCCGCAAGCCGGACGTTGTT
CTCCTTCCGCAGTACTTAAAGTTCAACAATCCACCCATCTTCTTTGAGCG
TCATCTGGCCCAGGAGATCGACGAGATGGCCAGCTTTTGTCGCATTTTTA
AGAACGAAGCCCGCATTGTGCTGGTTAAGAAAGAGAAGGGCTTATGGCCT
GAGATGTTCCAGAAGCTGGACAAGGAGGCACTCATGCAGAAGCGCCTAGA
GATCGCCGACCTCATCGTGGAGCGCAACAAGAAGCGGGATGAAAAGGCAC
TGGAACGTTACGATAACAAGCGGCGGGCGGAGATCCAGAAGGAGATCCAG
CGGGAGACAGATATGCGCGAGCGTGTGAAGCAGTTCCAGGAGAACTCGGT
GCGCGAAGCTCTGGTAGTGGATGTACGCAAGGAGGCGAAAGCTACGCCCA
AGCCAGATACACTGCAGTATCCGCCATCGTCGGGAGGCGCCAGTCGCCTG
GCCACGCCCCTCATGCGTCCGCCCATGAGCTCCGTTCGTGGCAGCGGACG
GATCAACGTAAACTTCACCACACAGCACAAGCGGGTCACGCCGAAGCGGG
AGTCGCAGGCCGCTATGGAGAAGGCATATGCCGCCGCCGGTGGACCCAAT
GCGAATGTCCAGTCGCCGATGGAGAGCGTCGATGAAGCAAGCTTTCTAGA
CCAT
BO14286.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-RA | 723 | CG14921-PA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-RA | 953 | CG14921-RA | 129..849 | 16..736 | 3605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11120746..11121301 | 736..181 | 2780 | 100 | Minus |
| 2L | 23513712 | 2L | 11121419..11121586 | 183..16 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:03 has no hits.
BO14286.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:26 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 1..723 | 17..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:50 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 94..826 | 12..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:17 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 99..818 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:26 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 94..826 | 12..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:28 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14921-RA | 130..849 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:28 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11120744..11121298 | 184..738 | 99 | <- | Minus |
| 2L | 11121419..11121585 | 17..183 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:17 Download gff for
BO14286.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11120744..11121298 | 184..738 | 99 | <- | Minus |
| arm_2L | 11121419..11121585 | 17..183 | 100 | | Minus |
BO14286.pep Sequence
Translation from 16 to 754
> BO14286.pep
MVQISQTEEDIKISIELNRLVTRKPDVVLLPQYLKFNNPPIFFERHLAQE
IDEMASFCRIFKNEARIVLVKKEKGLWPEMFQKLDKEALMQKRLEIADLI
VERNKKRDEKALERYDNKRRAEIQKEIQRETDMRERVKQFQENSVREALV
VDVRKEAKATPKPDTLQYPPSSGGASRLATPLMRPPMSSVRGSGRINVNF
TTQHKRVTPKRESQAAMEKAYAAAGGPNANVQSPMESVDEASFLDH
BO14286.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14921-PA | 240 | CG14921-PA | 1..240 | 1..240 | 1212 | 100 | Plus |
