Clone Sequence Records
BO14290.3prime Sequence
647 bp (646 high quality bases) assembled on 2006-05-29
> BO14290.3prime
ATGGTCTAGAAAGCTTGCGCACGTCAAGTCAAACTTAACGACTCCGTCGT
AGTCTGGACCAAATTCAAAGATTGGCTTTTTTTCCCACGGTCGGTTAAAG
CTCGCGGAGTAGGTGGTCTGCATGTTACTGATCTCGTCCAGCATTTTCTC
GCACTTGAACCGAAAGAGGTAATTGTGTGTCTTCGTAAGATTTCCGAAGG
CTTGCAGTCTGTCCACGTCCAGCGGCTGCTTCGGAGGACCGTTTTTGTCC
TTTTCGCCACTCGCGTGTATAAGACGCAGTCGAGGAATTTCCTGGAACTC
CAGGGTATTGGTGGTAGTGAAGTTCCTCTTGAGTAGCTCATCGTCCACCA
GGTTCAAGCTAGATCGCCTATTCCTTATAAAGTTCTTGTAAGCCAATTTG
CGATGATCCACAAACAAGGGTACTGCCTCGGCGCCAACGAAGGGTGCAGT
AGTGTAGGTGTCGTGGCAGAGCGACCTATGGAGCTCGCAACCACTCACAC
GGAGTCCTGGCAGGATGGCATTGCTCTGCTCCTCGACTGCGTAGCGGCGC
TCCGCCCAGTTGCCAATCAGCACCTCCTTGCCGAAAGGCGTCGAGGCCAT
GTCGTCCGCCAGGGACTTTTGGCTTTTGTTCATGTCGACTGATAACT
BO14290.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-PA | 618 | CG14448-RA | 1..615 | 633..19 | 3075 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-RA | 809 | CG14448-RA | 83..697 | 633..19 | 3075 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22788521..22789135 | 633..19 | 3075 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:32:12 has no hits.
BO14290.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:29 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-PA | 1..618 | 18..633 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:35 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-PA | 1..618 | 18..633 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:54:19 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 13..640 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:15:50 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 13..640 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:15:50 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22788518..22789139 | 13..640 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:54:19 Download gff for
BO14290.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22781618..22782239 | 13..640 | 98 | | Minus |
BO14290.5prime Sequence
647 bp (646 high quality bases) assembled on 2006-05-29
> BO14290.5prime
GAAGTTATCAGTCGACATGAACAAAAGCCAAAAGTCCCTGGCGGACGACA
TGGCCTCGACGCCTTTCGGCAAGGAGGTGCTGATTGGCAACTGGGCGGAG
CGCCGCTACGCAGTCGAGGAGCAGAGCAATGCCATCCTGCCAGGACTCCG
TGTGAGTGGTTGCGAGCTCCATAGGTCGCTCTGCCACGACACCTACACTA
CTGCACCCTTCGTTGGCGCCGAGGCAGTACCCTTGTTTGTGGATCATCGC
AAATTGGCTTACAAGAACTTTATAAGGAATAGGCGATCTAGCTTGAACCT
GGTGGACGATGAGCTACTCAAGAGGAACTTCACTACCACCAATACCCTGG
AGTTCCAGGAAATTCCTCGACTGCGTCTTATACACGCGAGTGGCGAAAAG
GACAAAAACGGTCCTCCGAAGCAGCCGCTGGACGTGGACAGACTGCAAGC
CTTCGGAAATCTTACGAAGACACACAATTACCTCTTTCGGTTCAAGTGCG
AGAAAATGCTGGACGAGATCAGTAACATGCAGACCACCTACTCCGCGAGC
TTTAACCGACCGTGGGAAAAAAAGCCAATCTTTGAATTTGGTCCAGACTA
CGACGGAGTCGTTAAGTTTGACTTGACGTGCGCAAGCTTTCTAGACC
BO14290.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-PA | 618 | CG14448-RA | 1..615 | 17..631 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:05:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-RA | 809 | CG14448-RA | 83..697 | 17..631 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:05:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22788521..22789135 | 17..631 | 3075 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:05:05 has no hits.
BO14290.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:30 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-PA | 1..618 | 17..632 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:36 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-PA | 1..618 | 17..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:53:56 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 10..637 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:53:45 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 10..637 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:53:45 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22788518..22789139 | 10..637 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:53:56 Download gff for
BO14290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22781618..22782239 | 10..637 | 98 | | Plus |
BO14290.complete Sequence
649 bp assembled on 2006-10-11
GenBank Submission: FJ633075
> BO14290.complete
GAAGTTATCAGTCGACATGAACAAAAGCCAAAAGTCCCTGGCGGACGACA
TGGCCTCGACGCCTTTCGGCAAGGAGGTGCTGATTGGCAACTGGGCGGAG
CGCCGCTACGCAGTCGAGGAGCAGAGCAATGCCATCCTGCCAGGACTCCG
TGTGAGTGGTTGCGAGCTCCATAGGTCGCTCTGCCACGACACCTACACTA
CTGCACCCTTCGTTGGCGCCGAGGCAGTACCCTTGTTTGTGGATCATCGC
AAATTGGCTTACAAGAACTTTATAAGGAATAGGCGATCTAGCTTGAACCT
GGTGGACGATGAGCTACTCAAGAGGAACTTCACTACCACCAATACCCTGG
AGTTCCAGGAAATTCCTCGACTGCGTCTTATACACGCGAGTGGCGAAAAG
GACAAAAACGGTCCTCCGAAGCAGCCGCTGGACGTGGACAGACTGCAAGC
CTTCGGAAATCTTACGAAGACACACAATTACCTCTTTCGGTTCAAGTGCG
AGAAAATGCTGGACGAGATCAGTAACATGCAGACCACCTACTCCGCGAGC
TTTAACCGACCGTGGGAAAAAAAGCCAATCTTTGAATTTGGTCCAGACTA
CGACGGAGTCGTTAAGTTTGACTTGACGTGCGCAAGCTTTCTAGACCAT
BO14290.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:14:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-RA | 618 | CG14448-PA | 1..615 | 17..631 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-RA | 809 | CG14448-RA | 83..697 | 17..631 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22788521..22789135 | 17..631 | 3075 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:14:48 has no hits.
BO14290.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:41:30 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 1..618 | 17..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:52 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 10..637 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:03 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 83..697 | 17..633 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:41:31 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 10..637 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:57 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 83..697 | 17..633 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:57 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22788521..22789135 | 17..633 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:03 Download gff for
BO14290.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22781621..22782235 | 17..633 | 99 | | Plus |
BO14290.pep Sequence
Translation from 16 to 649
> BO14290.pep
MNKSQKSLADDMASTPFGKEVLIGNWAERRYAVEEQSNAILPGLRVSGCE
LHRSLCHDTYTTAPFVGAEAVPLFVDHRKLAYKNFIRNRRSSLNLVDDEL
LKRNFTTTNTLEFQEIPRLRLIHASGEKDKNGPPKQPLDVDRLQAFGNLT
KTHNYLFRFKCEKMLDEISNMQTTYSASFNRPWEKKPIFEFGPDYDGVVK
FDLTCASFLDH
BO14290.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-PA | 205 | CG14448-PA | 1..205 | 1..205 | 1089 | 100 | Plus |
