Clone Sequence Records
BO14294.3prime Sequence
602 bp (601 high quality bases) assembled on 2006-05-29
> BO14294.3prime
ATGGTCTAGAAAGCTTGCGGTACAACATAGTCCATTATCCGATTCAGAAT
CCGACTCATATTCGTCAGCCGAATCCGTGGGACAAAAGCCTGATAAGGTC
GATTGTAGTTCAGTATAAAAGTAGCTCTTCTCGTCCTCTGTGACTTCCAT
TTCTATATCTCTGTAGCGCCTAGGTGAACCGAAGTTTTGGAGGTGCATGG
CTCTATTCACGAGAACCTTTAAATGGATCTCCTCATGCTCCTGACAGACC
CTAAGTTGTTTGTATTCCTGCTTGTCTCTATAAGTCTTGCACTTCTTGAA
CATCAGTCGATTGGACTTTGCCTTGAGCTCTTTTATAATCCTGTTCTGCG
CATCAATAGCGTTGACCACCTCCTGATACTCCTTGTACATTGCCTGTTGC
TCTTCATCGTCTTCATCGCTCTCATTGAGGAGCTCAAAGGGATCCTTCTC
CTCCACCTCGAACTTATCTTCCTCTTCAACGTCCTGTTCGTCTCCTTCGC
CCTCTCCCTCAAAATCTTCAGCAGCTTCTTGTCCTTCATTTTGCTCATTA
TCAACGTCTCCAGAGGCTTCTTGCTCCACATCAGACATGTCGACTGATAA
CT
BO14294.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-PA | 573 | CG13405-RA | 1..570 | 588..19 | 2850 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:01:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-RB | 1326 | CG13405-RB | 123..692 | 588..19 | 2850 | 100 | Minus |
| CG13405-RA | 785 | CG13405-RA | 61..630 | 588..19 | 2850 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:01:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 74641..75210 | 19..588 | 2850 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:01:18 has no hits.
BO14294.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:37 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-PA | 1..573 | 18..588 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:46 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-PA | 1..573 | 18..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:47:28 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 57..637 | 9..595 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:01:22 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 57..637 | 9..595 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:01:22 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 74634..75214 | 9..595 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:47:28 Download gff for
BO14294.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 74634..75214 | 9..595 | 98 | | Plus |
BO14294.5prime Sequence
602 bp (601 high quality bases) assembled on 2006-05-29
> BO14294.5prime
GAAGTTATCAGTCGACATGTCTGATGTGGAGCAAGAAGCCTCTGGAGACG
TTGATAATGAGCAAAATGAAGGACAAGAAGCTGCTGAAGATTTTGAGGGA
GAGGGCGAAGGAGACGAACAGGACGTTGAAGAGGAAGATAAGTTCGAGGT
GGAGGAGAAGGATCCCTTTGAGCTCCTCAATGAGAGCGATGAAGACGATG
AAGAGCAACAGGCAATGTACAAGGAGTATCAGGAGGTGGTCAACGCTATT
GATGCGCAGAACAGGATTATAAAAGAGCTCAAGGCAAAGTCCAATCGACT
GATGTTCAAGAAGTGCAAGACTTATAGAGACAAGCAGGAATACAAACAAC
TTAGGGTCTGTCAGGAGCATGAGGAGATCCATTTAAAGGTTCTCGTGAAT
AGAGCCATGCACCTCCAAAACTTCGGTTCACCTAGGCGCTACAGAGATAT
AGAAATGGAAGTCACAGAGGACGAGAAGAGCTACTTTTATACTGAACTAC
AATCGACCTTATCAGGCTTTTGTCCCACGGATTCGGCTGACGAATATGAG
TCGGATTCTGAATCGGATAATGGACTATGTTGTACCGCAAGCTTTCTAGA
CC
BO14294.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-PA | 573 | CG13405-RA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-RB | 1326 | CG13405-RB | 123..692 | 17..586 | 2850 | 100 | Plus |
| CG13405-RA | 785 | CG13405-RA | 61..630 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:20:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 74641..75210 | 586..17 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:20:31 has no hits.
BO14294.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:38 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-PA | 1..573 | 17..587 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:48 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-PA | 1..573 | 17..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:36:02 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 57..637 | 10..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:33:53 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 57..637 | 10..596 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:33:53 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 74634..75214 | 10..596 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:36:02 Download gff for
BO14294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 74634..75214 | 10..596 | 98 | | Minus |
BO14294.complete Sequence
604 bp assembled on 2006-10-11
GenBank Submission: FJ633078
> BO14294.complete
GAAGTTATCAGTCGACATGTCTGATGTGGAGCAAGAAGCCTCTGGAGACG
TTGATAATGAGCAAAATGAAGGACAAGAAGCTGCTGAAGATTTTGAGGGA
GAGGGCGAAGGAGACGAACAGGACGTTGAAGAGGAAGATAAGTTCGAGGT
GGAGGAGAAGGATCCCTTTGAGCTCCTCAATGAGAGCGATGAAGACGATG
AAGAGCAACAGGCAATGTACAAGGAGTATCAGGAGGTGGTCAACGCTATT
GATGCGCAGAACAGGATTATAAAAGAGCTCAAGGCAAAGTCCAATCGACT
GATGTTCAAGAAGTGCAAGACTTATAGAGACAAGCAGGAATACAAACAAC
TTAGGGTCTGTCAGGAGCATGAGGAGATCCATTTAAAGGTTCTCGTGAAT
AGAGCCATGCACCTCCAAAACTTCGGTTCACCTAGGCGCTACAGAGATAT
AGAAATGGAAGTCACAGAGGACGAGAAGAGCTACTTTTATACTGAACTAC
AATCGACCTTATCAGGCTTTTGTCCCACGGATTCGGCTGACGAATATGAG
TCGGATTCTGAATCGGATAATGGACTATGTTGTACCGCAAGCTTTCTAGA
CCAT
BO14294.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-RB | 573 | CG13405-PB | 1..570 | 17..586 | 2850 | 100 | Plus |
| CG13405-RA | 573 | CG13405-PA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-RB | 1326 | CG13405-RB | 123..692 | 17..586 | 2850 | 100 | Plus |
| CG13405-RA | 785 | CG13405-RA | 61..630 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 74641..75210 | 586..17 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:13:35 has no hits.
BO14294.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:53 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 1..573 | 17..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:30:12 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 53..633 | 10..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:22 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 61..630 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:53 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 53..633 | 10..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:43 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13405-RA | 61..630 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:43 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 74639..75210 | 17..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:22 Download gff for
BO14294.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 74639..75210 | 17..588 | 99 | | Minus |
BO14294.pep Sequence
Translation from 16 to 604
> BO14294.pep
MSDVEQEASGDVDNEQNEGQEAAEDFEGEGEGDEQDVEEEDKFEVEEKDP
FELLNESDEDDEEQQAMYKEYQEVVNAIDAQNRIIKELKAKSNRLMFKKC
KTYRDKQEYKQLRVCQEHEEIHLKVLVNRAMHLQNFGSPRRYRDIEMEVT
EDEKSYFYTELQSTLSGFCPTDSADEYESDSESDNGLCCTASFLDH
BO14294.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:31:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13405-PB | 190 | CG13405-PB | 1..190 | 1..190 | 997 | 100 | Plus |
| CG13405-PA | 190 | CG13405-PA | 1..190 | 1..190 | 997 | 100 | Plus |
| CG3213-PA | 676 | CG3213-PA | 9..138 | 25..153 | 253 | 42.7 | Plus |
