Clone BO14303 Report

Search the DGRC for BO14303

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG12857-RA
Protein status:BO14303.pep: validated full length
Sequenced Size:1354

Clone Sequence Records

BO14303.3prime Sequence

867 bp (727 high quality bases) assembled on 2006-05-29

> BO14303.3prime
ATGGTCTAGAAAGCTTGCATCGGCAACAAAATCGTCCGATTTTATCTTCC
TTGTGCTGCAACAGTCAATCTTTTTACTCGGGTCCTGAAATATCACCTGA
GACCAGTGATCTTTGGAGCATTGTTGTAATTCCGAAAGGTAATCCTCGAA
GTGTTTGAAACGAATTTCCCGGGTATTGGGACAACCGACGCCGTGATAAT
AGCTGCACAAGCTATCGCATATCCAGTTTCGCTGTCCGGAATCACTTGCG
TATTCCTCACTCTGTGCGTCATTGCCCTCCAAGGCATCCTCGTACATGCG
CGACGTTATTCTCGATATGGATTCGTCGATCTTGTACTCCACCTCCGGGT
TGAAAATCAGCTTCATCACCAACGGGTGATCCTCCTCCCGTCGCGCATAT
AGTAGATACCACAATGGCATCAGGTTGAATCGAATACAGGACATTAAACG
ACGTACGTGCACTTTCCTCTTGTTCCAATCGTGACCCAGCCATCGAACAG
CTATAAAGAAAACCTCAATCTCGGTGTTCACACAGATTTGATCGGATTCG
AGCAAAAAAATCAGATGGGAGGTCGGCAGATCGAGGAAATCCCTGGTGGC
CACAAAGGTGAGCAGAAACTTGCGGATCCTAGTCAGCATCAAATTGCGAA
CTACATCCATGGCGGGATTGTCCTTCGACTCGACGTATAGGACACATGCC
GTATCCTCGTTGTAGTATTCCTCATCATCGAAATATTTCCAACAATGCGC
CGCCCGACCAGAGATCCTCAAATAAGTGGCGGCCACATAGACCTCCACAA
TGTGAGCCAGCTCCAGGGACGGGCTCATCGCTCAGCATCCATTTGTAAGA
AAGCATAAAGGCCTTCT

BO14303.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-PA 1323 CG12857-RA 522..1320 817..19 3970 99.8 Minus
CG12857-PA 1323 CG12857-RA 473..523 867..817 205 96 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-RA 1584 CG12857-RA 519..1366 867..19 4175 99.5 Minus
CG12857-RB 1571 CG12857-RB 519..1353 867..19 3970 98 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14758125..14758621 19..515 2485 100 Plus
2R 25286936 2R 14758673..14759027 512..867 1685 98.9 Plus
Blast to na_te.dros performed on 2015-02-10 16:44:54 has no hits.

BO14303.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:47 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-PA 473..1323 15..867 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:00 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-PA 473..1323 15..867 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:44:18 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 519..1371 12..867 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:58:42 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 519..1371 12..867 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:58:42 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 14758120..14758619 12..513 99 <- Plus
2R 14758675..14759027 514..867 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:44:18 Download gff for BO14303.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10645625..10646124 12..513 99 <- Plus
arm_2R 10646180..10646532 514..867 98   Plus

BO14303.5prime Sequence

917 bp (824 high quality bases) assembled on 2006-05-29

> BO14303.5prime
GAAGTTATCAGTCGACATGGAGGAGCTAATGAGGCAGAACGGACAGAAAT
GCGAGAGGCAGGAACTCACCTGCAGCGTTTTATTTACCAATCCCAAGCTT
AGTGCCGAGAAGTTATCCTCCAATGATGAAATAAACTCCATTGCGAGATT
CGTATCGAAGGCGGAGGATCTCGAAATGCATAGAGTGTTCAGTAAGATAT
CAAAGAATGGTGTCGAGGAGACCACGTCTCTGAATCGCTCCCTCTTCGAG
TTCGGTCATAATTTCGAGGATGCCGATGGCTGGCTGAAACTGGAGCAGCC
TTGCAAGGATCGGCTGGCCACGGTGCTGCGCTACATGTTCGAGTCCCATC
TGAAGACCACTGTGCAGATAGAAATCAACAATATGTACTTCAATTGCCAC
TTCATCGTGCTGCAGGTGTACTCTCGCTTCTTTAGTGAACTGGAGATGAT
TCCGCTGCTGGTCACCCTGCCCGAGAAGATCGTGTCCCAGAAGGCCTTTA
TGCTCTCCTACAAATGGATGCTGAGCGATGAGCCCGTCCTGGAGCTGGCT
CACATTGTGGAGGTCTATGTGGCCGCCACTTATTTGAGGATCTCTGGTCT
GGCGGCGCATTGTTGGAAATATTTCGATGATGAGGAATACTACAACGAGG
ATACGGCATGTGTCCTATACGTCGAGTCGAAGGACAATCCCGCCATGGAT
GTAGTTCGCAATTTGATGCTGACTAGGATCCGCAAGTTTCTGCTCACCTT
TGTGGCCACCAGGGATTTCCTCGATCTGCCGACCTCCCATCTGATTTTTT
TGCTCGAATCCGATCAAATCTGTGTGAACACCGAGATTGAGGTTTTTCTT
ATAGCTGTTCAATGGCTGGGTCACGATTGGAACAAGAAGGAAGTGCACGT
ACGTCGTTTTATGTCCT

BO14303.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-PA 1323 CG12857-RA 1..901 17..917 4355 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-RA 1584 CG12857-RA 42..947 12..917 4425 99.2 Plus
CG12857-RB 1571 CG12857-RB 42..934 12..917 4250 98 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14758673..14759425 843..91 3765 100 Minus
2R 25286936 2R 14759483..14759561 90..12 380 98.7 Minus
2R 25286936 2R 14758544..14758621 917..840 300 92.3 Minus
Blast to na_te.dros performed on 2015-02-10 20:57:21 has no hits.

BO14303.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:48 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-PA 1..901 17..917 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:02 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-PA 1..901 17..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:37:12 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 39..947 7..917 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:50 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 39..947 7..917 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:34:50 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14758544..14758619 842..917 92 <- Minus
2R 14758675..14759425 91..841 100 <- Minus
2R 14759483..14759564 7..90 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:37:12 Download gff for BO14303.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10646049..10646124 842..917 92 <- Minus
arm_2R 10646180..10646930 91..841 100 <- Minus
arm_2R 10646988..10647069 7..90 95   Minus

BO14303.complete Sequence

1354 bp assembled on 2006-10-11

GenBank Submission: FJ633081

> BO14303.complete
GAAGTTATCAGTCGACATGGAGGAGCTAATGAGGCAGAACGGACAGAAAT
GCGAGAGGCAGGAACTCACCTGCAGCGTTTTATTTACCAATCCCAAGCTT
AGTGCCGAGAAGTTATCCTCCAATGATGAAATAAACTCCATTGCGAGATT
CGTATCGAAGGCGGAGGATCTCGAAATGCATAGAGTGTTCAGTAAGATAT
CAAAGAATGGTGTCGAGGAGACCACGTCTCTGAATCGCTCCCTCTTCGAG
TTCGGTCATAATTTCGAGGATGCCGATGGCTGGCTGAAACTGGAGCAGCC
TTGCAAGGATCGGCTGGCCACGGTGCTGCGCTACATGTTCGAGTCCCATC
TGAAGACCACTGTGCAGATAGAAATCAACAATATGTACTTCAATTGCCAC
TTCATCGTGCTGCAGGTGTACTCTCGCTTCTTTAGTGAACTGGAGATGAT
TCCGCTGCTGGTCACCCTGCCCGAGAAGATCGTGTCCCAGAAGGCCTTTA
TGCTCTCCTACAAATGGATGCTGAGCGATGAGCCCGTCCTGGAGCTGGCT
CACATTGTGGAGGTCTATGTGGCCGCCACTTATTTGAGGATCTCTGGTCT
GGCGGCGCATTGTTGGAAATATTTCGATGATGAGGAATACTACAACGAGG
ATACGGCATGTGTCCTATACGTCGAGTCGAAGGACAATCCCGCCATGGAT
GTAGTTCGCAATTTGATGCTGACTAGGATCCGCAAGTTTCTGCTCACCTT
TGTGGCCACCAGGGATTTCCTCGATCTGCCGACCTCCCATCTGATTTTTT
TGCTCGAATCCGATCAAATCTGTGTGAACACCGAGATTGAGGTTTTCTTT
ATAGCTGTTCGATGGCTGGGTCACGATTGGAACAAGAGGAAAGTGCACGT
ACGTCGTTTAATGTCCTGTATTCGATTCAACCTGATGCCATTGTGGTATC
TACTATATGCGCGACGGGAGGAGGATCACCCGTTGGTGATGAAGCTGATT
TTCAACCCGGAGGTGGAGTACAAGATCGACGAATCCATATCGAGAATAAC
GTCGCGCATGTACGAGGATGCCTTGGAGGGCAATGACGCACAGAGTGAGG
AATACGCAAGTGATTCCGGACAGCGAAACTGGATATGCGATAGCTTGTGC
AGCTATTATCACGGCGTCGGTTGTCCCAATACCCGGGAAATTCGTTTCAA
ACACTTCGAGGATTACCTTTCGGAATTACAACAATGCTCCAAAGATCACT
GGTCTCAGGTGATATTTCAGGACCCGAGTAAAAAGATTGACTGTTGCAGC
ACAAGGAAGATAAAATCGGACGATTTTGTTGCCGATGCAAGCTTTCTAGA
CCAT

BO14303.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-RA 1323 CG12857-PA 1..1320 17..1336 6600 100 Plus
CG12857-RB 882 CG12857-PB 1..882 17..911 4245 98.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-RA 1584 CG12857-RA 42..1366 12..1336 6610 99.9 Plus
CG12857-RB 1571 CG12857-RB 42..1353 12..1336 6380 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14758673..14759425 843..91 3765 100 Minus
2R 25286936 2R 14758125..14758621 1336..840 2485 100 Minus
2R 25286936 2R 14759483..14759561 90..12 380 98.7 Minus
Blast to na_te.dros performed on 2014-11-26 16:16:56 has no hits.

BO14303.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:40:35 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 1..1323 17..1340 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:36 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 31..1363 7..1343 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:56:47 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 47..1366 17..1338 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:40:36 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 31..1363 7..1343 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:27 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
CG12857-RA 47..1366 17..1338 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:15:27 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14758123..14758619 842..1338 99 <- Minus
2R 14758675..14759425 91..841 100 <- Minus
2R 14759483..14759556 17..90 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:56:47 Download gff for BO14303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10645628..10646124 842..1338 99 <- Minus
arm_2R 10646180..10646930 91..841 100 <- Minus
arm_2R 10646988..10647061 17..90 100   Minus

BO14303.pep Sequence

Translation from 16 to 1354

> BO14303.pep
MEELMRQNGQKCERQELTCSVLFTNPKLSAEKLSSNDEINSIARFVSKAE
DLEMHRVFSKISKNGVEETTSLNRSLFEFGHNFEDADGWLKLEQPCKDRL
ATVLRYMFESHLKTTVQIEINNMYFNCHFIVLQVYSRFFSELEMIPLLVT
LPEKIVSQKAFMLSYKWMLSDEPVLELAHIVEVYVAATYLRISGLAAHCW
KYFDDEEYYNEDTACVLYVESKDNPAMDVVRNLMLTRIRKFLLTFVATRD
FLDLPTSHLIFLLESDQICVNTEIEVFFIAVRWLGHDWNKRKVHVRRLMS
CIRFNLMPLWYLLYARREEDHPLVMKLIFNPEVEYKIDESISRITSRMYE
DALEGNDAQSEEYASDSGQRNWICDSLCSYYHGVGCPNTREIRFKHFEDY
LSELQQCSKDHWSQVIFQDPSKKIDCCSTRKIKSDDFVADASFLDH

BO14303.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12857-PA 440 CG12857-PA 1..440 1..440 2331 100 Plus
CG12857-PB 293 CG12857-PB 1..277 1..277 1431 99.6 Plus
CG30357-PA 451 CG30357-PA 81..443 70..431 491 33.7 Plus
CG9970-PA 484 CG9970-PA 140..450 107..406 290 27.8 Plus
CG10801-PA 558 CG10801-PA 207..515 116..424 272 24.1 Plus