Clone Sequence Records
BO14308.5prime Sequence
695 bp (656 high quality bases) assembled on 2006-05-29
> BO14308.5prime
GAAGTTATCAGTCGACATGGAGTTGGAACAAAACTTGACCGCCGCCCTGA
TGCAGTCGTCGGCGGAGGAGGGCAAGTCGGAGGAGGCGTGGCCGGCGGAC
GCCCACCTGCATCAGCCGGCCGAGGCGAATCAGCTCCTGCTGCCGGAGCG
CTCCAGCTGCCTGGCGGTGAAGACGTTTTTGCGCATGTGCAACCTACCAT
TTACGGAGCACATCAGCGACAATGCAGAGTTTATGTCACCAGGTGGCCGG
TTGACCCACCTGCCGCTGCTCCGTTTGGGCCCTGTCAAGACTTTTGCGGA
ATTCGAGCCAATAGTGGCCCAAGTGGAGGCCGTGCAAGGCGGCAATTGCC
TGGACAGTTGGATGTCCGAGGATCAGCGCGATAACATCCGCTGTCTGGTT
AGCTATGTGGAGAATGTCTTCACCCTGGCGGAGATTCACATGAGTTTTGT
GGATGAGGTAAACTATCAACTTTACACGGCAACGCGCTGTGCAGCCGCTC
ATCCGTGGCCGTTGAGTACGATTCGCCGGTTTGCCAAGCAGAAGGACGCA
CAGAAGATACTGAAGGTCTACCGGTGGCAGGATTTGGACAACGACCAGGT
AATCCAGAAGGTGAGCATCTGTGCCGATGCGTTGATCGCTGAACTGGAGG
AGGACCAGGCGAAGAGCTATTTCGGCGGCTCACGACCTTTGCAAT
BO14308.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5662-PA | 879 | CG5662-RA | 1..673 | 17..689 | 3290 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 08:24:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5662-RB | 1082 | CG5662-RB | 70..743 | 16..689 | 3325 | 99.6 | Plus |
CG5662-RA | 992 | CG5662-RA | 70..743 | 16..689 | 3325 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 08:23:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15210455..15211128 | 16..689 | 3325 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-09 08:23:57 has no hits.
BO14308.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:23:57 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-PA | 1..677 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:15 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-PA | 1..677 | 17..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 18:09:59 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 58..735 | 16..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:40:24 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 70..747 | 16..695 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:40:24 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15210455..15211132 | 16..695 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 18:09:59 Download gff for
BO14308.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15104488..15105165 | 16..695 | 99 | | Plus |
BO14308.complete Sequence
910 bp assembled on 2009-10-23
GenBank Submission: KX794980
> BO14308.complete
GAAGTTATCAGTCGACATGGAGTTGGAACAAAACTTGACCGCCGCCCTGA
TGCAGTCGTCGGCGGAGGAGGGCAAGTCGGAGGAGGCGTGGCCGGCGGAC
GCCCACCTGCATCAGCCGGCCGAGGCGAATCAGCTCCTGCTGCCGGAGCG
CTCCAGCTGCCTGGCGGTGAAGACGTTTTTGCGCATGTGCAACCTACCAT
TTACGGAGCACATCAGCGACAATGCAGAGTTTATGTCACCAGGTGGCCGG
TTGACCCACCTGCCGCTGCTCCGTTTGGGCCCTGTCAAGACTTTTGCGGA
ATTCGAGCCAATAGTGGCCCAAGTGGAGGCCGTGCAAGGCGGCAATTGCC
TGGACAGTTGGATGTCCGAGGATCAGCGCGATAACATCCGCTGTCTGGTT
AGCTATGTGGAGAATGTCTTCACCCTGGCGGAGATTCACATGAGTTTTGT
GGATGAGGTAAACTATCAACTTTACACGGCAACGCGCTGTGCAGCCGCTC
ATCCGTGGCCGTTGAGTACGATTCGCCGGTTTGCCAAGCAGAAGGACGCA
CAGAAGATACTGAAGGTCTACCGGTGGCAGGATTTGGACAACGACCAGGT
AATCCAGGAGGTGAGCATCTGTGCCGATGCGTTGATCGCTGAACTGGAGG
AGGACCAGGCGAAGAGCTATTTCGGCGGCTCACGACCTTGCAAATTGGAC
GCCCTGGTCTTTGGCCATGTGGTAGCCATAATGACCACCAAGCTTCCCAA
CATGGAACTGGCCGCGGTTCTGGCCACATATCCACGTCTATTGGCCCACT
GTCGCCGCATCGATCAGAGCCTGTTTGATGGCAAACTCCTGACCAGCGCG
GTGGAGGAGCAGGAGGACGAGATGGAGTTGGAAAAAATAGAAGCAAGCTT
TCTAGACCAT
BO14308.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:02:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5662-RB | 879 | CG5662-PB | 1..876 | 17..892 | 4350 | 99.8 | Plus |
CG5662-RA | 879 | CG5662-PA | 1..876 | 17..892 | 4350 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5662-RB | 1082 | CG5662-RB | 70..946 | 16..892 | 4355 | 99.8 | Plus |
CG5662-RA | 992 | CG5662-RA | 70..946 | 16..892 | 4355 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15210455..15211331 | 16..892 | 4355 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:02:47 has no hits.
BO14308.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-23 10:13:26 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 59..923 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:09 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 59..923 | 17..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:56:01 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 59..939 | 17..897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:05 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5662-RA | 71..935 | 17..881 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:05 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15210456..15211320 | 17..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:09 Download gff for
BO14308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15104489..15105353 | 17..881 | 99 | | Plus |
BO14308.pep Sequence
Translation from 16 to 910
> BO14308.pep
MELEQNLTAALMQSSAEEGKSEEAWPADAHLHQPAEANQLLLPERSSCLA
VKTFLRMCNLPFTEHISDNAEFMSPGGRLTHLPLLRLGPVKTFAEFEPIV
AQVEAVQGGNCLDSWMSEDQRDNIRCLVSYVENVFTLAEIHMSFVDEVNY
QLYTATRCAAAHPWPLSTIRRFAKQKDAQKILKVYRWQDLDNDQVIQEVS
ICADALIAELEEDQAKSYFGGSRPCKLDALVFGHVVAIMTTKLPNMELAA
VLATYPRLLAHCRRIDQSLFDGKLLTSAVEEQEDEMELEKIEASFLDH
BO14308.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:02:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5662-PB | 292 | CG5662-PB | 1..292 | 1..292 | 1512 | 100 | Plus |
CG5662-PA | 292 | CG5662-PA | 1..292 | 1..292 | 1512 | 100 | Plus |
CG8004-PA | 269 | CG8004-PA | 6..267 | 11..275 | 622 | 46.8 | Plus |