Clone BO14315 Report

Search the DGRC for BO14315

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG4169-RA
Protein status:BO14315.pep: validated full length
Sequenced Size:1354

Clone Sequence Records

BO14315.3prime Sequence

759 bp (685 high quality bases) assembled on 2006-05-29

> BO14315.3prime
ATGGTCTAGAAAGCTTGCAGCCAAATCGGAGGCGTAGGGCACGTTCGCCA
GGTGCCCGATGGCGCCGACGGCCAGCTTGGAGCTGCCCACCTTCTTGGCC
GCCTCCTGGACCTGCGACTGCGAGATGCCATCGATTGCGCCAAGCAGGGC
GTCCGCCTCCAGCACGTTCCGGGTGAGCGCCGCCTGGCGACCGATCTCCT
TAATTAGACCACCGTCCGACGAGTAGCGCGAGATGATGCGCGCCTTCAGA
AGAGCCTTGCCTCTGGCCACATCCTTATCAGACACCGAAGCCGACTTCAG
GCCGCGCACCAGGAACTCCACGGTCTTGCCAATGTCCTTGGAGTCGGCGG
AGACCACAAAACCGAACAGACCAGCGTCCGAGTAGCTGGCATTCACAGCC
TTGACAGAGGCTCCGACGCCGCCGGCGCAGTTGACGGCCTCGCCAAAGAG
TCCAGCAGAAGTGCCGCGCTTGGTGGCGGCCTTGGCGCCGAGCGCCTGCT
CCAGGATGGCGAATGCCAGCGCTTCCTTGTGGTTCGATGCGGCGGCGCCC
TGTCCAGCAACGGCGACGACCGCACGGTGACCAGAAGTGTCCTTGCGCGC
ATCTCCACCATACCAGTTGGCGGAGGCAGCCTTGCTGCCGCCGCTGGGGA
ACTGCAGGGTCTGGGCGAAGCCGGCCAGCGTGTTGTTGTCGATTCCCACG
CCCACGACAGCGGCACGGCCAGCTGCGAAGGTCTGGGCCACGTAGTGCAG
CAGGCTCTC

BO14315.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-PA 1323 CG4169-RA 580..1320 759..19 3705 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-RB 1537 CG4169-RB 707..1447 759..19 3705 100 Minus
CG4169-RA 1686 CG4169-RA 856..1596 759..19 3705 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16585281..16586021 759..19 3705 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:03:24 has no hits.

BO14315.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:08 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-PA 580..1323 15..759 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:28 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-PA 580..1323 15..759 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:35:22 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 856..1606 7..759 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:30 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 856..1606 7..759 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:30 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 16585281..16586031 7..759 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:35:22 Download gff for BO14315.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16578381..16579131 7..759 99   Minus

BO14315.5prime Sequence

862 bp (825 high quality bases) assembled on 2006-05-29

> BO14315.5prime
GAAGTTATCAGTCGACATGGCCTGTAACGCTAGCAAGACGTCGCTCCTGC
GCGCCATCGCCAAACGAGGCTACGCCACCTGCCCGCGTCCCGTCGGCGAC
CTGTCCGCCGTGAACGTCAAGGTGCTGGAGAACAAACTGGTGGTAGCCAC
CGCCGATGCAACTCTTCCCGTTTCGCGCGTCTCTTTGGTGCTGGGAGCCG
GATCACGAAACGAGTCCTACGACATCCAGGGAGCCTCGCACCTGCTTCGT
TTGGCCGGAGGACTGAGCACCCAGAACTCGACCGCCTTCGCCATCGCCCG
CAACATCCAGCAGGTGGGCGGTACCCTGACCACATGGGGCGATCGCGAGC
TCGTCGGCTACACGGTGACCACCACAGCAGACAACGCCGAGACTGGACTG
CGCTATCTGCAGGACCTGCTCCAGCCAGCCTTCAAGCCCTGGGAGTTGGT
CGACAATGCCAAAACGGTGGTCAACCAACTGAACGCCGTCTCCACGGAGG
AACGCGCCATTGAGCTCGTTCACAAGGCCGCCTTCCGCAACGGCCTGGGC
AACTCGATCTACTCGCCCCGCTTCCAGTTGGGCAAGCTGTCCTCCGAGAG
CCTGCTGCACTACGTGGCCCAGACCTTCGCAGCTGGCCGTGCCGCTGTCG
TGGGCGTGGGAATCGACAACAACACGCTGGCCGGCTTCGCCCAGACCCTG
CAGTTCCCCAGCGGCGGCAGCAAGGCTGCCTCCGCCAACTGGTATGGTGG
AGATGCGCGCAAGGACACTTCTGGTCACCGTGCGGTCGTCGCCGTTGCTG
GACAGGGCGCCGCCGCATCGAACCACAAGGAAGCGCTGGCATTCGCCATC
TTGGAGCAGGCG

BO14315.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-PA 1323 CG4169-RA 1..846 17..862 4205 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-RB 1537 CG4169-RB 127..973 16..862 4220 99.9 Plus
CG4169-RA 1686 CG4169-RA 276..1122 16..862 4220 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:14:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16585183..16585547 498..862 1810 99.7 Plus
3L 28110227 3L 16584778..16585083 195..500 1530 100 Plus
3L 28110227 3L 16584589..16584722 62..195 670 100 Plus
3L 28110227 3L 16584399..16584444 16..61 230 100 Plus
Blast to na_te.dros performed on 2015-02-04 02:14:38 has no hits.

BO14315.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:09 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-PA 1..846 17..862 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:29 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-PA 1..846 17..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:43:56 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 271..1122 9..862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:21:00 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 271..1122 9..862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:21:00 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16584394..16584444 9..61 94 -> Plus
3L 16584589..16584722 62..195 100 -> Plus
3L 16584779..16585082 196..499 100 -> Plus
3L 16585185..16585547 500..862 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:43:56 Download gff for BO14315.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16577494..16577544 9..61 94 -> Plus
arm_3L 16577689..16577822 62..195 100 -> Plus
arm_3L 16577879..16578182 196..499 100 -> Plus
arm_3L 16578285..16578647 500..862 99   Plus

BO14315.complete Sequence

1354 bp assembled on 2006-10-11

GenBank Submission: FJ633084

> BO14315.complete
GAAGTTATCAGTCGACATGGCCTGTAACGCTAGCAAGACGTCGCTCCTGC
GCGCCATCGCCAAACGAGGCTACGCCACCTGCCCGCGTCCCGTCGGCGAC
CTGTCCGCCGTGAACGTCAAGGTGCTGGAGAACAAACTGGTGGTAGCCAC
CGCCGATGCAACTCTTCCCGTTTCGCGCGTCTCTTTGGTGCTGGGAGCCG
GATCACGAAACGAGTCCTACGACATCCAGGGAGCCTCGCACCTGCTTCGT
TTGGCCGGAGGACTGAGCACCCAGAACTCGACCGCCTTCGCCATCGCCCG
CAACATCCAGCAGGTGGGCGGTACCCTGACCACATGGGGCGATCGCGAGC
TCGTCGGCTACACGGTGACCACCACAGCAGACAACGCCGAGACTGGACTG
CGCTATCTGCAGGACCTGCTCCAGCCAGCCTTCAAGCCCTGGGAGTTGGT
CGACAATGCCAAAACGGTGGTCAACCAACTGAACGCCGTCTCCACGGAGG
AACGCGCCATTGAGCTCGTTCACAAGGCCGCCTTCCGCAACGGCCTGGGC
AACTCGATCTACTCGCCCCGCTTCCAGTTGGGCAAGCTGTCCTCCGAGAG
CCTGCTGCACTACGTGGCCCAGACCTTCGCAGCTGGCCGTGCCGCTGTCG
TGGGCGTGGGAATCGACAACAACACGCTGGCCGGCTTCGCCCAGACCCTG
CAGTTCCCCAGCGGCGGCAGCAAGGCTGCCTCCGCCAACTGGTATGGTGG
AGATGCGCGCAAGGACACTTCTGGTCACCGTGCGGTCGTCGCCGTTGCTG
GACAGGGCGCCGCCGCATCGAACCACAAGGAAGCGCTGGCATTCGCCATC
CTGGAGCAGGCGCTCGGCGCCAAGGCCGCCACCAAGCGCGGCACTTCTGC
TGGACTCTTTGGCGAGGCCGTCAACTGCGCCGGCGGCGTCGGAGCCTCTG
TCAAGGCTGTGAATGCCAGCTACTCGGACGCTGGTCTGTTCGGTTTTGTG
GTCTCCGCCGACTCCAAGGACATTGGCAAGACCGTGGAGTTCCTGGTGCG
CGGCCTGAAGTCGGCTTCGGTGTCTGATAAGGATGTGGCCAGAGGCAAGG
CTCTTCTGAAGGCGCGCATCATCTCGCGCTACTCGTCGGACGGTGGTCTA
ATTAAGGAGATCGGTCGCCAGGCGGCGCTCACCCGGAACGTGCTGGAGGC
GGACGCCCTGCTTGGCGCAATCGATGGCATCTCGCAGTCGCAGGTCCAGG
AGGCGGCCAAGAAGGTGGGCAGCTCCAAGCTGGCCGTCGGCGCCATCGGG
CACCTGGCGAACGTGCCCTACGCCTCCGATTTGGCTGCAAGCTTTCTAGA
CCAT

BO14315.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-RB 1323 CG4169-PB 1..1320 17..1336 6600 100 Plus
CG4169-RA 1323 CG4169-PA 1..1320 17..1336 6600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-RB 1537 CG4169-RB 127..1447 16..1336 6605 100 Plus
CG4169-RA 1686 CG4169-RA 276..1596 16..1336 6605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16585183..16586021 498..1336 4195 100 Plus
3L 28110227 3L 16584778..16585083 195..500 1530 100 Plus
3L 28110227 3L 16584589..16584722 62..195 670 100 Plus
3L 28110227 3L 16584399..16584444 16..61 230 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:58:39 has no hits.

BO14315.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:39:11 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 1..1323 17..1340 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:02 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 271..1606 9..1348 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:04 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 277..1596 17..1338 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:39:12 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 271..1606 9..1348 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:38 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
CG4169-RA 277..1596 17..1338 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:38 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16584400..16584444 17..61 100 -> Plus
3L 16584589..16584722 62..195 100 -> Plus
3L 16584779..16585082 196..499 100 -> Plus
3L 16585185..16586021 500..1338 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:04 Download gff for BO14315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16577500..16577544 17..61 100 -> Plus
arm_3L 16577689..16577822 62..195 100 -> Plus
arm_3L 16577879..16578182 196..499 100 -> Plus
arm_3L 16578285..16579121 500..1338 99   Plus

BO14315.pep Sequence

Translation from 16 to 1354

> BO14315.pep
MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATL
PVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQV
GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQPAFKPWELVDNAKT
VVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYV
AQTFAAGRAAVVGVGIDNNTLAGFAQTLQFPSGGSKAASANWYGGDARKD
TSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGE
AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSA
SVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLG
AIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDLAASFLDH

BO14315.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4169-PB 440 CG4169-PB 1..440 1..440 2172 100 Plus
CG4169-PA 440 CG4169-PA 1..440 1..440 2172 100 Plus
CG3731-PB 470 CG3731-PB 29..456 20..434 208 21.6 Plus
CG3731-PA 470 CG3731-PA 29..456 20..434 208 21.6 Plus