Clone BO14324 Report

Search the DGRC for BO14324

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG9222-RA
Protein status:BO14324.pep: validated full length
Sequenced Size:1045

Clone Sequence Records

BO14324.3prime Sequence

855 bp (746 high quality bases) assembled on 2006-05-29

> BO14324.3prime
ATGGTCTAGAAAGCTTGCTTTGCTAGGCGAATACCAAGGGTCCTCCTTGA
CCTGCGGAATATTGTACCTGATCTTCACCGGTGCTAGAATATGCATAATC
ATGTGCTTGCACTCGCTGGAAGCTGATGGGGATTTGGGGAAGACCAGCGA
TTGATTGATGCGCTTGAGCAGGATGTGCACATTGGAGCCATCGTAGGGAA
GGCGTCCAAAGACCATCGCATAGCAGACGACGCCGCAGGCCCAGATGTCC
GACATGAAAGGATCATAGGCGACGCCCTTGAGGATCTCTGGACTGGCGTA
GGCATAGCTGCCGCAGAAGGTTTTCGAGAGTATCACTTGATTGTCGGAGG
TTCGGGTATCCTTCCTTGCGAACCCGAAGTCGATCAGTTTCAGATTCCAG
TTCTCATCCAGCAGCAGATTCTCGCACTTAATATCCCGATGCACCACTCC
CTTGCTGTGGATGTACTCCACGGCACTCACCAGCTGCTTGAATAGCGTAC
GTGATTGCGGCTCGTCCAGAAACTTTCGCTCACGGACGTAGTCCAGAAGC
GTTCCATTCTCGGCCAGCTGCATTATCAAGTACACCCTATGACTGGTCTC
GATGCTCTGATAAAAAGTTATCAGATTTTCGTGGTGCAGACCCTTCACCG
CCTCGATCTCTCGCGGCAGGAACTTTTGCGTGTACTCGGAGGGAGCCTTC
ACTTTGGATATGATCTTGACAGCCACCCGCTTTCCGTACTCCTCGGAGAA
GCCAATCTTCACCTTGGCATAGTTTCCGGTGCCAATAACCTTACCGAGTA
TGATGCCATGCTCCTCAAGAATGGTTTTCTGCGGCTTCCACTTGTCGTCG
GCCTT

BO14324.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-PA 1014 CG9222-RA 175..1011 855..19 4035 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-RA 1290 CG9222-RA 339..1175 855..19 4095 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6131746..6132059 588..275 1525 99 Minus
2L 23513712 2L 6131420..6131689 855..586 1305 98.9 Minus
2L 23513712 2L 6132112..6132369 276..19 1290 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:23:55 has no hits.

BO14324.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:26 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-PA 175..1014 18..855 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:52 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-PA 175..1014 18..855 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:17:08 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 339..1180 11..855 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:43:08 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 339..1180 11..855 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:43:08 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6131420..6131688 587..855 98 -> Minus
2L 6131748..6132058 276..586 99 -> Minus
2L 6132113..6132374 11..275 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:17:08 Download gff for BO14324.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6131420..6131688 587..855 98 -> Minus
arm_2L 6131748..6132058 276..586 99 -> Minus
arm_2L 6132113..6132374 11..275 98   Minus

BO14324.5prime Sequence

918 bp (802 high quality bases) assembled on 2006-05-29

> BO14324.5prime
GAAGTTATCAGTCGACATGGCGACATCTCCCAGAAGGAAAAACGATCAAG
GCGGAGTAATTGGCGCTAGCTCATCGCAGGACCTCGTCACTGACCAGAAC
TCGGGTCGTCGTCAGGAGCAGAAGGTCTACACCTTCAGTGACCGGCCACC
ACAACCAAAGCCACCGGCACCATCCGGAGTCGTTCCGGTAAAGGCCGACG
ACAAGTCGAAGCCGCAGAAAACCATTCTTGAGGAGCATGGCATCATACTC
GGTAAGGTTATTGGCACCGGAAACTATGCCAAGGTGAAGATTGGCTTCTC
CGAGGAGTACGGAAAGCGGGTGGCTGTCAAGATCATATCCAAAGTGAAGG
CTCCCTCCGAGTACACGCAAAAGTTCCTGCCGCGAGAGATCGAGGCGGTG
AAGGGTCTGCACCACGAAAATCTGATAACTTTTTATCAGAGCATCGAGAC
CAGTCATAGGGTGTACTTGATAATGCAGCTGGCCGAGAATGGAACGCTTC
TGGACTACGTCCGTGAGCGAAAGTTTCTGGACGAGCCGCAATCACGTACG
CTATTCAAGCAGCTGGTGAGTGCCGTGGAGTACATCCACAGCAAGGGAGT
GGTGCATCGGGATATTAAGTGCGAGAATCTGCTGCTGGATGAGAACTGGA
ATCTGAAACTGATCGACTTCGGGTTCGCAAGGAAGGATACCCGAACCTCC
GACAATCAAGTGATACTCTCGAAAACCTTCTGCGGCAGCTATGCCTACGC
CAGTCCAGAGATCCTCAAGGGCGTCGCCTATGATCCTTTCATGTCGGACA
TCTGGGCCTGCGGCGTCGTCTGCTATGCGATGGTCTTTGGACGCCTTCCC
TACCATGGCTCCAATGTGCACATCCTGCTCAAGCGCATCAATCAATCGCT
GGTCTTCCCCCAATCCCC

BO14324.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-PA 1014 CG9222-RA 1..902 17..918 4310 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-RA 1290 CG9222-RA 165..1066 17..918 4390 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6131284..6131689 55..460 2000 99.5 Plus
2L 23513712 2L 6131746..6132059 458..771 1525 99 Plus
2L 23513712 2L 6132112..6132260 770..918 715 98.7 Plus
2L 23513712 2L 6131187..6131226 17..56 185 97.5 Plus
Blast to na_te.dros performed on 2015-02-11 13:24:22 has no hits.

BO14324.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:27 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-PA 1..902 17..918 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:53 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-PA 1..902 17..918 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:11:31 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1066 17..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:54:59 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1066 17..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:54:59 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6131187..6131226 17..56 97 -> Plus
2L 6131286..6131688 57..459 99 -> Plus
2L 6131748..6132058 460..770 99 -> Plus
2L 6132113..6132260 771..918 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:11:31 Download gff for BO14324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6132113..6132260 771..918 98   Plus
arm_2L 6131187..6131226 17..56 97 -> Plus
arm_2L 6131286..6131688 57..459 99 -> Plus
arm_2L 6131748..6132058 460..770 99 -> Plus

BO14324.complete Sequence

1045 bp assembled on 2006-10-11

GenBank Submission: FJ633087

> BO14324.complete
GAAGTTATCAGTCGACATGGCGACATCTCCCAGAAGGAAAAACGATCAAG
GCGGAGTAATTGGCGCTAGCTCATCGCAGGACCTCGTCACTGACCAGAAC
TCGGGTCGTCGTCAGGAGCAGAAGGTCTACACCTTCAGTGACCGGCCACC
ACAACCAAAGCCACCGGCACCATCCGGAGTCGTTCCGGTAAAGGCCGACG
ACAAGTCGAAGCCGCAGAAAACCATTCTTGAGGAGCATGGCATCATACTC
GGTAAGGTTATTGGCACCGGAAACTATGCCAAGGTGAAGATTGGCTTCTC
CGAGGAGTACGGAAAGCGGGTGGCTGTCAAGATCATATCCAAAGTGAAGG
CTCCCTCCGAGTACACGCAAAAGTTCCTGCCGCGAGAGATCGAGGCGGTG
AAGGGTCTGCACCACGAAAATCTGATAACTTTTTATCAGAGCATCGAGAC
CAGTCATAGGGTGTACTTGATAATGCAGCTGGCCGAGAATGGAACGCTTC
TGGACTACGTCCGTGAGCGAAAGTTTCTGGACGAGCCGCAATCACGTACG
CTATTCAAGCAGCTGGTGAGTGCCGTGGAGTACATCCACAGCAAGGGAGT
GGTGCATCGGGATATTAAGTGCGAGAATCTGCTGCTGGATGAGAACTGGA
ATCTGAAACTGATCGACTTCGGGTTCGCAAGGAAGGATACCCGAACCTCC
GACAATCAAGTGATACTCTCGAAAACCTTCTGCGGCAGCTATGCCTACGC
CAGTCCAGAGATCCTCAAGGGCGTCGCCTATGATCCTTTCATGTCGGACA
TCTGGGCCTGCGGCGTCGTCTGCTATGCGATGGTCTTTGGACGCCTTCCC
TACGATGGCTCCAATGTGCACATCCTGCTCAAGCGCATCAATCAATCGCT
GGTCTTCCCCAAATCCCCATCAGCTTCCAGCGAGTGCAAGCACATGATTA
TGCATATTCTAGCACCGGTGAAGATCAGGTACAATATTCCGCAGGTCAAG
GAGGACCCTTGGTATTCGCCTAGCAAAGCAAGCTTTCTAGACCAT

BO14324.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-RA 1014 CG9222-PA 1..1011 17..1027 4965 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-RA 1290 CG9222-RA 165..1175 17..1027 4965 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6131284..6131689 55..460 2000 99.5 Plus
2L 23513712 2L 6131746..6132059 458..771 1525 99 Plus
2L 23513712 2L 6132112..6132369 770..1027 1290 100 Plus
2L 23513712 2L 6131187..6131226 17..56 185 97.5 Plus
Blast to na_te.dros performed on 2014-11-27 14:24:48 has no hits.

BO14324.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:39:31 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 1..1014 17..1028 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:11 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1180 17..1035 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:21 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1175 17..1029 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:39:32 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1180 17..1035 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:58 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
CG9222-RA 165..1175 17..1029 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:58 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6131187..6131226 17..56 97 -> Plus
2L 6131286..6131688 57..459 99 -> Plus
2L 6131748..6132058 460..770 99 -> Plus
2L 6132113..6132369 771..1029 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:21 Download gff for BO14324.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6131748..6132058 460..770 99 -> Plus
arm_2L 6131187..6131226 17..56 97 -> Plus
arm_2L 6131286..6131688 57..459 99 -> Plus
arm_2L 6132113..6132369 771..1029 99   Plus

BO14324.pep Sequence

Translation from 16 to 1045

> BO14324.pep
MATSPRRKNDQGGVIGASSSQDLVTDQNSGRRQEQKVYTFSDRPPQPKPP
APSGVVPVKADDKSKPQKTILEEHGIILGKVIGTGNYAKVKIGFSEEYGK
RVAVKIISKVKAPSEYTQKFLPREIEAVKGLHHENLITFYQSIETSHRVY
LIMQLAENGTLLDYVRERKFLDEPQSRTLFKQLVSAVEYIHSKGVVHRDI
KCENLLLDENWNLKLIDFGFARKDTRTSDNQVILSKTFCGSYAYASPEIL
KGVAYDPFMSDIWACGVVCYAMVFGRLPYDGSNVHILLKRINQSLVFPKS
PSASSECKHMIMHILAPVKIRYNIPQVKEDPWYSPSKASFLDH

BO14324.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG9222-PA 337 CG9222-PA 1..337 1..337 1760 100 Plus
CG14305-PD 302 CG14305-PD 23..290 71..332 482 36.4 Plus
CG14305-PC 302 CG14305-PC 23..290 71..332 482 36.4 Plus
CG14305-PA 302 CG14305-PA 23..290 71..332 482 36.4 Plus
CG43143-PD 1180 CG11870-PD 49..295 53..305 471 39 Plus