Clone BO14330 Report

Search the DGRC for BO14330

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG13004-RA
Protein status:BO14330.pep: validated full length
Sequenced Size:637

Clone Sequence Records

BO14330.5prime Sequence

635 bp (634 high quality bases) assembled on 2006-05-29

> BO14330.5prime
GAAGTTATCAGTCGACATGGTACTACAAAACCACAACACTGTGGTGGCCC
GTTCCACCTTGACGCCGAACAGCAGCAGCCAGAACTTTGGCTCCCAACAT
CCAGCTGGAACGCCCAATGGATCCGGAACCGGACGTAGTCCCCTGAACGC
CGGACCCAGCACCCAACGTCCCATTATCGACCTGTTGGTGGCCATGGTGG
CCGTGCCGGTGCTTATCCTCTGCGCCCTGCAGCTGGAGAAGAATCTGCGG
GACAATAGCGTGGAGTCTCGCTGGTTGGTTTTCGCCCTGGGCATCGGGAT
GCTGGTGATCAGCGTGATCATCTGCGGTTATGTCACGCACCGCATGGGCG
TCTGCATTTGGGCGGGACCCATCGACGAGGCGGGAAACAGGGCCACCAAT
GGAGCCATGCCACATATCAACTCCCAGAACGATGTGCTGCGCATTGTCGA
CTCACTGCCGCCAAGTTACGAAAGCGTGGTCAAGTTCGAGCTACCGCCGC
CGACCTACGAATGCCTGGTCATCAGCTGGGGTCGGTCGAAGGATCTGGAG
CCGGCACAGACCTCAGCCAAGCGAGGAGCTGGTGGATCCAACTCCCCGCC
CGGGTCCACCCTGCACATCGCAAGCTTTCTAGACC

BO14330.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-PA 606 CG13004-RA 1..603 17..619 2990 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-RB 2234 CG13004-RB 906..1513 12..619 3010 99.7 Plus
CG13004-RD 2321 CG13004-RD 998..1600 17..619 3000 99.8 Plus
CG13004-RC 936 CG13004-RC 49..651 17..619 3000 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16827676..16828074 415..17 1980 99.7 Minus
X 23542271 X 16827402..16827605 619..416 1020 100 Minus
Blast to na_te.dros performed on 2015-02-09 11:09:31 has no hits.

BO14330.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:40 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-PA 1..606 17..620 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:10 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-PA 1..606 17..620 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:41:58 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 896..1507 7..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:42:49 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 902..1513 7..619 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:42:49 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16827402..16827605 416..619 100 <- Minus
X 16827676..16828078 9..415 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:41:58 Download gff for BO14330.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16721435..16721638 416..619 100 <- Minus
arm_X 16721709..16722111 9..415 98   Minus

BO14330.3prime Sequence

635 bp (634 high quality bases) assembled on 2006-05-29

> BO14330.3prime
ATGGTCTAGAAAGCTTGCGATGTGCAGGGTGGACCCGGGCGGGGAGTTGG
ATCCACCAGCTCCTCGCTTGGCTGAGGTCTGTGCCGGCTCCAGATCCTTC
GACCGACCCCAGCTGATGACCAGGCATTCGTAGGTCGGCGGCGGTAGCTC
GAACTTGACCACGCTTTCGTAACTTGGCGGCAGTGAGTCGACAATGCGCA
GCACATCGTTCTGGGAGTTGATATGTGGCATGGCTCCATTGGTGGCCCTG
TTTCCCGCCTCGTCGATGGGTCCCGCCCAAATGCAGACGCCCATGCGGTG
CGTGACATAACCGCAGATGATCACGCTGATCACCAGCATCCCGATGCCCA
GGGCGAAAACCAACCAGCGAGACTCCACGCTATTGTCCCGCAGATTCTTC
TCCAGCTGCAGGGCGCAGAGGATAAGCACCGGCACGGCCACCATGGCCAC
CAACAGGTCGATAATGGGACGTTGGGTGCTGGGTCCGGCGTTCAGGGGAC
TACGTCCGGTTCCGGATCCATTGGGCGTTCCAGCTGGATGTTGGGAGCCA
AAGTTCTGGCTGCTGCTGTTCGGCGTCAAGGTGGAACGGGCCACCACAGT
GTTGTGGTTTTGTAGTACCATGTCGACTGATAACT

BO14330.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-PA 606 CG13004-RA 1..603 621..19 2990 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:02:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-RB 2234 CG13004-RB 906..1513 626..19 3010 99.7 Minus
CG13004-RD 2321 CG13004-RD 998..1600 621..19 3000 99.8 Minus
CG13004-RC 936 CG13004-RC 49..651 621..19 3000 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16827676..16828074 223..621 1980 99.7 Plus
X 23542271 X 16827402..16827605 19..222 1020 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:02:13 has no hits.

BO14330.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:39 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-PA 1..606 18..621 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:09 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-PA 1..606 18..621 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:35:05 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 896..1507 19..631 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:15 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 902..1513 19..631 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:15 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16827402..16827605 19..222 100 <- Plus
X 16827676..16828078 223..629 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:35:05 Download gff for BO14330.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16721435..16721638 19..222 100 <- Plus
arm_X 16721709..16722111 223..629 98   Plus

BO14330.complete Sequence

637 bp assembled on 2006-10-11

GenBank Submission: FJ633089

> BO14330.complete
GAAGTTATCAGTCGACATGGTACTACAAAACCACAACACTGTGGTGGCCC
GTTCCACCTTGACGCCGAACAGCAGCAGCCAGAACTTTGGCTCCCAACAT
CCAGCTGGAACGCCCAATGGATCCGGAACCGGACGTAGTCCCCTGAACGC
CGGACCCAGCACCCAACGTCCCATTATCGACCTGTTGGTGGCCATGGTGG
CCGTGCCGGTGCTTATCCTCTGCGCCCTGCAGCTGGAGAAGAATCTGCGG
GACAATAGCGTGGAGTCTCGCTGGTTGGTTTTCGCCCTGGGCATCGGGAT
GCTGGTGATCAGCGTGATCATCTGCGGTTATGTCACGCACCGCATGGGCG
TCTGCATTTGGGCGGGACCCATCGACGAGGCGGGAAACAGGGCCACCAAT
GGAGCCATGCCACATATCAACTCCCAGAACGATGTGCTGCGCATTGTCGA
CTCACTGCCGCCAAGTTACGAAAGCGTGGTCAAGTTCGAGCTACCGCCGC
CGACCTACGAATGCCTGGTCATCAGCTGGGGTCGGTCGAAGGATCTGGAG
CCGGCACAGACCTCAGCCAAGCGAGGAGCTGGTGGATCCAACTCCCCGCC
CGGGTCCACCCTGCACATCGCAAGCTTTCTAGACCAT

BO14330.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-RD 654 CG13004-PD 49..651 17..619 3000 99.8 Plus
CG13004-RB 606 CG13004-PB 1..603 17..619 3000 99.8 Plus
CG13004-RC 606 CG13004-PC 1..603 17..619 3000 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-RB 2234 CG13004-RB 906..1513 12..619 3010 99.7 Plus
CG13004-RD 2321 CG13004-RD 998..1600 17..619 3000 99.8 Plus
CG13004-RC 936 CG13004-RC 49..651 17..619 3000 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16827676..16828074 415..17 1980 99.7 Minus
X 23542271 X 16827402..16827605 619..416 1020 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:56:04 has no hits.

BO14330.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:39:57 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 1..606 17..620 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:21 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 896..1507 7..619 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:44 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 905..1507 17..621 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:39:59 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 896..1507 7..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:16 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
CG13004-RB 911..1513 17..621 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:16 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
X 16827400..16827605 416..621 99 <- Minus
X 16827676..16828074 17..415 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:44 Download gff for BO14330.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16721433..16721638 416..621 99 <- Minus
arm_X 16721709..16722107 17..415 99   Minus

BO14330.pep Sequence

Translation from 16 to 637

> BO14330.pep
MVLQNHNTVVARSTLTPNSSSQNFGSQHPAGTPNGSGTGRSPLNAGPSTQ
RPIIDLLVAMVAVPVLILCALQLEKNLRDNSVESRWLVFALGIGMLVISV
IICGYVTHRMGVCIWAGPIDEAGNRATNGAMPHINSQNDVLRIVDSLPPS
YESVVKFELPPPTYECLVISWGRSKDLEPAQTSAKRGAGGSNSPPGSTLH
IASFLDH

BO14330.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13004-PB 201 CG13004-PB 1..201 1..201 1049 100 Plus
CG13004-PC 201 CG13004-PC 1..201 1..201 1049 100 Plus
CG13004-PA 201 CG13004-PA 1..201 1..201 1049 100 Plus
CG13004-PD 217 CG13004-PD 17..217 1..201 1049 100 Plus