Clone BO14331 Report

Search the DGRC for BO14331

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:31
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14331.pep: validated not full length
Sequenced Size:1042

Clone Sequence Records

BO14331.3prime Sequence

672 bp (650 high quality bases) assembled on 2006-05-29

> BO14331.3prime
ATGGTCTAGAAAGCTTGCGCTAGAAAGTTGCGAAGTCTCGATCGGAACTT
CCTTCTCAGTGGGTGCAATGGAGGACTTTTCCGGCAGGAACTCAATCGGG
CGTAACAGGTGCTTCTTGCAGCTATTCAACTGATCGCCGTTATCCTCATC
GTCGGAGGACACCTCACTGCCACACCTCATTCTAACGGGCAGCTTAACCG
CATCGATTGGCAAATGACCCAGGCAATCGAAACCCACATAGCCCAACTTA
TAGCTGGCCACAGCATTGGCGAAGTCCACGGCTTCGGCCAATCGCCTTTG
CCGCACAAAAGCGGCATAAATGAAGCCCGCCGTGAAGCAATCACTATCGC
CCACCCGATCGATGATCTTTTTCGGCTTGTGTGCTGGCACTTCGAAGTAC
TCCCCTTCCGTGGTCATACATCCTGCTCCCAGGCTGCTCCACGGCACAAT
GATGCAGGGTCTGCGAATTCTAATGTTCCTTGGCATGCGCAGTAGCGCAT
TGACACCCTCGCAGGCTTCCAGCGGTGACTTCCAGCCTCTGGACTCGGCT
ATATACTTGGTGACGAACACATAGTCGCACATGGCAATCAGATGCACGAC
CTGTTCGAAGGAATTGAAAATCTGCAACGATAACCACTATCCGATCCCGT
TCATCCCGCCCGTTGTTGTGAT

BO14331.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-PA 1137 CG12289-RA 521..1134 632..19 3070 100 Minus
CG12289-PB 1011 CG12289-RB 395..1008 632..19 3070 100 Minus
CG12289-PA 1137 CG12289-RA 482..521 672..633 200 100 Minus
CG12289-PB 1011 CG12289-RB 356..395 672..633 200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-RA 1395 CG12289-RA 660..1312 672..19 3245 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11457159..11457811 19..672 3220 99.8 Plus
Blast to na_te.dros performed on 2015-02-11 09:55:50 has no hits.

BO14331.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:41 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-PB 356..1011 18..672 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:12 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-PB 356..1011 18..672 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:55:44 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 660..1312 19..672 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:06:24 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 660..1312 19..672 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:06:24 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11457159..11457811 19..672 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:55:44 Download gff for BO14331.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11450259..11450911 19..672 99   Plus

BO14331.5prime Sequence

744 bp (743 high quality bases) assembled on 2006-05-29

> BO14331.5prime
GAAGTTATCAGTCGACATGCTTCAGCGCAGCGGAAGATCCTCGAATGTTA
GTACGGCCCTGCGTCTGTTGGGCGCCAATGTGGAGTTGTTCGGTGTGCTC
ACCCGTAATCCCACCTATCGCATGATTCTGGATGATCTCGAGCAGCGGGG
CATTGATATTAGCCATTGTACATTCACGGACGCAAGTCCTCCCTTTTCCA
CAATTGTCCAAGATCGCTGGACGCGTCGTTGCACGGTGGTGTATTGCGAC
AAGTCATTTCCATATGTTACGGCAGCGGATTTTCGCAAACTGGATCTCGA
TCAATACGGCTGGGTGAATTTTGAGGCACGGAGTCCACGTGAAACTTGCG
ATATGATACGCCTAATCCTCGATCACAACAACGGGCGGGATGAACGGGAT
CGGATAGTGGTATCGTTGCAGATTTTCAATTCCTTCGAACAGGTCGTGCA
TCTGATTGCCATGTGCGACTATGTGTTCGTCACCAAGTATATAGCCGAGT
CCAGAGGCTGGAAGTCACCGCTGGAAGCCTGCGAGGGTGTCAATGCGCTA
CTGCGCATGCCAAGGAACATTAGAATTCGCAGACCCTGCATCATTGTGCC
GTGGAGCAGCCTGGGAGCAGGATGTATGACCACGGAAGGGGAGTACTTCG
AAGTGCCAGCACACAAGCCGAAAAAGATCATCGATCGGGTGGGCGATAGT
GATTGCTTCACGGCGGGCTTCATTTATGCCGCTTTTGTGCGGCA

BO14331.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-PA 1137 CG12289-RA 127..854 17..744 3590 99.7 Plus
CG12289-PB 1011 CG12289-RB 1..728 17..744 3590 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:31:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-RA 1395 CG12289-RA 305..1032 17..744 3610 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11457439..11458166 744..17 3610 99.7 Minus
Blast to na_te.dros performed on 2015-02-12 05:31:41 has no hits.

BO14331.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:24:42 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-PB 1..727 17..743 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:13 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-PB 1..727 17..743 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:57:21 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 303..1031 14..743 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:37:59 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 303..1031 14..743 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:37:59 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11457440..11458168 14..743 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:57:21 Download gff for BO14331.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11450540..11451268 14..743 99   Minus

BO14331.complete Sequence

1042 bp assembled on 2006-10-11

GenBank Submission: FJ633090

> BO14331.complete
GAAGTTATCAGTCGACATGCTTCAGCGCAGCGGAAGATCCTCGAATGTTA
GTACGGCCCTGCGTCTGTTGGGCGCCAATGTGGAGTTGTTCGGTGTGCTC
ACCCGTAATCCCACCTATCGCATGATTCTGGATGATCTCGAGCAGCGGGG
CATTGATATTAGCCATTGTACATTCACGGACGCAAGTCCTCCCTTTTCCA
CAATTGTCCAAGATCGCTGGACGCGTCGTTGCACGGTGGTGTATTGCGAC
AAGTCATTTCCATATGTTACGGCAGCGGATTTTCGCAAACTGGATCTCGA
TCAATACGGCTGGGTGAATTTTGAGGCACGGAGTCCACGTGAAACTTGCG
ATATGATACGCCTAATCCTCGATCACAACAACGGGCGGGATGAACGGGAT
CGGATAGTGGTATCGTTGCAGATTTTCAATTCCTTCGAACAGGTCGTGCA
TCTGATTGCCATGTGCGACTATGTGTTCGTCACCAAGTATATAGCCGAGT
CCAGAGGCTGGAAGTCACCGCTGGAAGCCTGCGAGGGTGTCAATGCGCTA
CTGCGCATGCCAAGGAACATTAGAATTCGCAGACCCTGCATCATTGTGCC
GTGGAGCAGCCTGGGAGCAGGATGTATGACCACGGAAGGGGAGTACTTCG
AAGTGCCAGCACACAAGCCGAAAAAGATCATCGATCGGGTGGGCGATAGT
GATTGCTTCACGGCGGGCTTCATTTATGCCGCTTTTGTGCGGCAAAGGCG
ATTGGCCGAAGCCGTGGACTTCGCCAATGCTGTGGCCAGCTATAAGTTGG
GCTATGTGGGTTTCGATTGCCTGGGTCATTTGCCAATCGATGCGGTTAAG
CTGCCCGTTAGAATGAGGTGTGGCAGTGAGGTGTCCTCCGACGATGAGGA
TAACGGCGATCAGTTGAATAGCTGCAAGAAGCACCTGTTACGCCCGATTG
AGTTCCTGCCGGAAAAGTCCTCCATTGCACCCACTGAGAAGGAAGTTCCG
ATCGAGACTTCGCAACTTTCTAGCGCAAGCTTTCTAGACCAT

BO14331.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-RA 1137 CG12289-PA 127..1134 17..1024 5010 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-RA 1395 CG12289-RA 305..1312 17..1024 5010 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11457159..11458166 1024..17 5010 99.8 Minus
Blast to na_te.dros performed on 2014-11-26 15:39:15 has no hits.

BO14331.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:40:06 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
CG12289-RB 1..1011 17..1025 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:53:24 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
CG12289-RB 135..1144 14..1024 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:53 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 305..1312 17..1026 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:40:07 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
CG12289-RB 135..1144 14..1024 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:37 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
CG12289-RA 305..1312 17..1026 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:37 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11457157..11458166 17..1026 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:53 Download gff for BO14331.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11450257..11451266 17..1026 99   Minus

BO14331.pep Sequence

Translation from 16 to 1042

> BO14331.pep
MLQRSGRSSNVSTALRLLGANVELFGVLTRNPTYRMILDDLEQRGIDISH
CTFTDASPPFSTIVQDRWTRRCTVVYCDKSFPYVTAADFRKLDLDQYGWV
NFEARSPRETCDMIRLILDHNNGRDERDRIVVSLQIFNSFEQVVHLIAMC
DYVFVTKYIAESRGWKSPLEACEGVNALLRMPRNIRIRRPCIIVPWSSLG
AGCMTTEGEYFEVPAHKPKKIIDRVGDSDCFTAGFIYAAFVRQRRLAEAV
DFANAVASYKLGYVGFDCLGHLPIDAVKLPVRMRCGSEVSSDDEDNGDQL
NSCKKHLLRPIEFLPEKSSIAPTEKEVPIETSQLSSASFLDH

BO14331.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12289-PA 378 CG12289-PA 43..378 1..336 1771 100 Plus
CG7328-PA 306 CG7328-PA 39..304 3..274 577 42.7 Plus
CG7551-PB 322 CG7551-PB 50..316 4..272 526 37.5 Plus
CG7335-PA 372 CG7335-PA 65..367 3..277 292 26.6 Plus