Clone Sequence Records
BO14349.3prime Sequence
641 bp (640 high quality bases) assembled on 2006-05-29
> BO14349.3prime
ATGGTCTAGAAAGCTTGCAAAGACATTGATTTTACTCATTTTGCTTTTGC
TTTCCGAGTCCGAATCCTCCGACCAAAAATCATCTGGCAAACAAATCGCT
TTCCAGCCCATTGCGTCCGCATCGTCAGAGATGGAATTCTGCTCATCCAG
CTGGTTGAAGGGACTGGCATTCAAAGGACCCGACCAACTCGCGACGCGAC
TAACTGGCGGTGGAATAAGGCAATCGGAATTCTCCTTCCGATACGTTCGA
GCCTTCAGTTTGTTTACTGCGTTGGGCAATTGCGGTACAGGCACCTCCTC
CTCGTCGTCGTCGGGCGATGAAGTGGAATTGGGCACATTTACGATGTAGC
TAATGGGATCCAGGCGGATCCCTATGGTTTTCTGGGAGGATCGGCTGTGT
GGTCGCGTCAGATGTGGATTGCCCTCTCGACGTCGCCGTGCGTTTCTATT
TTCCGTCTTGAGCCTCCCGTTTGCCGACCTGCCGCCATTGATGACGCTCC
TCGTGGATATATTCACCGGGGGCGACTTTCGCCTGGCGGCCAGCTTCTTC
GGATGCGGAATCCTGTAGCGACCATTCGCGTAGTCATTGCGCGGACTGAC
GAAAATTCCAGCCAAATATTTAAGCATGTCGACTGATAACT
BO14349.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-PA | 612 | CG11756-RA | 1..609 | 627..19 | 3045 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:40:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 86..694 | 627..19 | 3045 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348205..11348813 | 627..19 | 3045 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 11:40:02 has no hits.
BO14349.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:18 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-PA | 1..612 | 15..627 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:03 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-PA | 1..612 | 15..627 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:53:57 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 15..627 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:35:43 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 15..627 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:35:43 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348205..11348816 | 15..627 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:53:57 Download gff for
BO14349.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242238..11242849 | 15..627 | 99 | | Minus |
BO14349.5prime Sequence
641 bp (640 high quality bases) assembled on 2006-05-29
> BO14349.5prime
GAAGTTATCAGTCGACATGCTTAAATATTTGGCTGGAATTTTCGTCAGTC
CGCGCAATGACTACGCGAATGGTCGCTACAGGATTCCGCATCCGAAGAAG
CTGGCCGCCAGGCGAAAGTCGCCCCCGGTGAATATATCCACGAGGAGCGT
CATCAATGGCGGCAGGTCGGCAAACGGGAGGCTCAAGACGGAAAATAGAA
ACGCACGGCGACGTCGAGAGGGCAATCCACATCTGACGCGACCACACAGC
CGATCCTCCCAGAAAACCATAGGGATCCGCCTGGATCCCATTAGCTACAT
CGTAAATGTGCCCAATTCCACTTCATCGCCCGACGACGACGAGGAGGAGG
TGCCTGTACCGCAATTGCCCAACGCAGTAAACAAACTGAAGGCTCGAACG
TATCGGAAGGAGAATTCCGATTGCCTTATTCCACCGCCAGTTAGTCGCGT
CGCGAGTTGGTCGGGTCCTTTGAATGCCAGTCCCTTCAACCAGCTGGATG
AGCAGAATTCCATCTCTGACGATGCGGACGCAATGGGCTGGAAAGCGATT
TGTTTGCCAGATGATTTTTGGTCGGAGGATTCGGACTCGGAAAGCAAAAG
CAAAATGAGTAAAATCAATGTCTTTGCAAGCTTTCTAGACC
BO14349.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-PA | 612 | CG11756-RA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 86..694 | 17..625 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348205..11348813 | 17..625 | 3045 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:51:49 has no hits.
BO14349.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:19 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-PA | 1..612 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:05 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-PA | 1..612 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:10:54 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:57:08 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 17..629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:57:08 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348205..11348816 | 17..629 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:10:54 Download gff for
BO14349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242238..11242849 | 17..629 | 99 | | Plus |
BO14349.complete Sequence
643 bp assembled on 2006-10-11
GenBank Submission: FJ633097
> BO14349.complete
GAAGTTATCAGTCGACATGCTTAAATATTTGGCTGGAATTTTCGTCAGTC
CGCGCAATGACTACGCGAATGGTCGCTACAGGATTCCGCATCCGAAGAAG
CTGGCCGCCAGGCGAAAGTCGCCCCCGGTGAATATATCCACGAGGAGCGT
CATCAATGGCGGCAGGTCGGCAAACGGGAGGCTCAAGACGGAAAATAGAA
ACGCACGGCGACGTCGAGAGGGCAATCCACATCTGACGCGACCACACAGC
CGATCCTCCCAGAAAACCATAGGGATCCGCCTGGATCCCATTAGCTACAT
CGTAAATGTGCCCAATTCCACTTCATCGCCCGACGACGACGAGGAGGAGG
TGCCTGTACCGCAATTGCCCAACGCAGTAAACAAACTGAAGGCTCGAACG
TATCGGAAGGAGAATTCCGATTGCCTTATTCCACCGCCAGTTAGTCGCGT
CGCGAGTTGGTCGGGTCCTTTGAATGCCAGTCCCTTCAACCAGCTGGATG
AGCAGAATTCCATCTCTGACGATGCGGACGCAATGGGCTGGAAAGCGATT
TGTTTGCCAGATGATTTTTGGTCGGAGGATTCGGACTCGGAAAGCAAAAG
CAAAATGAGTAAAATCAATGTCTTTGCAAGCTTTCTAGACCAT
BO14349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:00:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 612 | CG11756-PA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 86..694 | 17..625 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348205..11348813 | 17..625 | 3045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:00:44 has no hits.
BO14349.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:38:38 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 1..612 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:51 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:23:07 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..694 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:38:39 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 17..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:36:36 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..694 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:36:36 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348205..11348813 | 17..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:23:07 Download gff for
BO14349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242238..11242846 | 17..627 | 99 | | Plus |
BO14349.pep Sequence
Translation from 16 to 643
> BO14349.pep
MLKYLAGIFVSPRNDYANGRYRIPHPKKLAARRKSPPVNISTRSVINGGR
SANGRLKTENRNARRRREGNPHLTRPHSRSSQKTIGIRLDPISYIVNVPN
STSSPDDDEEEVPVPQLPNAVNKLKARTYRKENSDCLIPPPVSRVASWSG
PLNASPFNQLDEQNSISDDADAMGWKAICLPDDFWSEDSDSESKSKMSKI
NVFASFLDH
BO14349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-PA | 203 | CG11756-PA | 1..203 | 1..203 | 1069 | 100 | Plus |
