Clone BO14355 Report

Search the DGRC for BO14355

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG14480-RA
Protein status:BO14355.pep: validated full length
Sequenced Size:781

Clone Sequence Records

BO14355.3prime Sequence

779 bp (741 high quality bases) assembled on 2006-05-29

> BO14355.3prime
ATGGTCTAGAAAGCTTGCCTCTGAGCACTGCTTCTTCTTGGGAATTTTGC
GGCCACATAAGTCGGTTCGGCTGCACATACTGGGTTCCTCCTCATCGGTG
CTGGCCTCCGAGTCACTAGACTCCGTGTAGGAGCCGATGCCCGGAAGTAT
AGCGATGCACTTTAGGGCCCCCTGGTTGTATTTGTTTGTAATTAATGTGG
TGTTCGTTGTCTTATCAGCAGGGTCCTTGGTTGCTTCATTTGTCGCTGTC
TGTTCGACCTCATTCTCAGTGATTTTGGCTACTTTACTGGTGGTGGGCAG
TTCGCCGTTTTTTCTCTTGATGCCCTGGCCGAGCAGCGTCTTCTGAGTGC
TACGCCCGACCGAAGCTCCCGCGGACTTCGCTGTGGTTTTTAGTTCAGCT
TGCAGTTTCTTGTCTACACTCTCCTCCTGCAGCTTTTCCACACGATTGCG
AAAATCCTTTAGTTCTAGCTCCTCGTCGCGCATTTGCTGGCGCTCCGCGT
GTATTTTATGGGCATCGACCAATTCCAGAAACTGCACCTCATCATCGTCC
AGACCACGGATGAGGTTTTTCAGCTTGTGGGCTTCCTCGAACTCCATGTC
CTTCTTGTCCTTATTTTGTTTGAGGCGTTCATAAAGTGAGCGCCCATCGT
AGGGTTCCTCACGTCGTTCTAGTGGATCCTCCGGCTGGCGTACACGCTCC
CATTCCTCCTGACGTCTCTGCCTTTGCTCGGTCGCCTCAGCTTCAGTCAC
AAAGCCCGAACTCATGTCAACTGATAACT

BO14355.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-PA 750 CG14480-RA 1..747 765..19 3710 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-RB 875 CG14480-RB 53..800 766..19 3725 99.9 Minus
CG14480-RA 1337 CG14480-RA 515..1262 766..19 3725 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17565386..17565777 410..19 1960 100 Minus
2R 25286936 2R 17564907..17565103 766..570 970 99.5 Minus
2R 25286936 2R 17565164..17565324 569..409 805 100 Minus
Blast to na_te.dros performed on 2015-02-02 19:39:25 has no hits.

BO14355.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:30 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-PA 1..750 18..765 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:20 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-PA 1..750 18..765 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:54:14 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 19..772 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:10:31 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 19..772 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:10:31 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17564900..17565103 570..772 98 -> Minus
2R 17565164..17565324 409..569 100 -> Minus
2R 17565388..17565777 19..408 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:54:14 Download gff for BO14355.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13452405..13452608 570..772 98 -> Minus
arm_2R 13452669..13452829 409..569 100 -> Minus
arm_2R 13452893..13453282 19..408 100   Minus

BO14355.5prime Sequence

780 bp (725 high quality bases) assembled on 2006-05-29

> BO14355.5prime
GAAGTTATCAGTCGACATGAGTTCGGGCTTTGTGACTGAAGCTGAGGCGA
CCGAGCAAAGGCAGAGACGTCAGGAGGAATGGGAGCGTGTACGCCAGCCG
GAGGATCCACTAGAACGACCTGAGGAACCCTACGATGGGCGCTCACTTTA
TGAACGCCTCAAACAAAATAAGGACAAGAAGGACATGGAGTTCGAGGAAG
CCCACAAGCTGAAAAACCTCATCCGTGGTCTGGACGATGATGAGGTGCAG
TTTCTGGAATTGGTCGATGCCCATAAAATACACGCGGAGCGCCAGCAAAT
GCGCGACGAGGAGCTAGAACTAAAGGATTTTCGCAATCGTGTGGAAAAGC
TGCAGGAGGAGAGTGTAGACAAGAAACTGCAAGCTGAACTAAAAACCACA
GCGAAGTCCGCGGGAGCTTCGGTCGGGCGTAGCACTCAGAAGACGCTGCT
CGGCCAGGGCATCAAGAGAAAAAACGGCGAACTGCCCACCACCAGTAAAG
TAGCCAAAATCACTGAGAATGAGGTCGAACAGACAGCGACAAATGAAGCA
ACCAAGGACCCTGCTGATAAGACAACGAACACCACATTAATTACAAACAA
ATACAACCAGGGGGCCCTAAAGTGCATCGCTATACTTCCGGGCATCGGCT
CCTACACGGAGTCTAGTGACTCGGAGGCCAGCACCGATGAGGAGGAACCC
AGTATGTGCAGCCGAACCGACTTATGTGGCCCGCAAATTCCCAAGAAGAA
GCAGTGCTCAGAGGCAAGCTTTCTAGACCA

BO14355.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-PA 750 CG14480-RA 1..715 17..731 3575 100 Plus
CG14480-PA 750 CG14480-RA 719..747 735..763 145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-RB 875 CG14480-RB 53..800 16..763 3695 99.7 Plus
CG14480-RA 1337 CG14480-RA 515..1262 16..763 3695 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17565386..17565777 372..763 1915 99.2 Plus
2R 25286936 2R 17564907..17565103 16..212 985 100 Plus
2R 25286936 2R 17565164..17565324 213..373 805 100 Plus
Blast to na_te.dros performed on 2015-02-09 11:10:24 has no hits.

BO14355.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:31 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-PA 1..750 17..764 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:21 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-PA 1..750 17..764 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:42:08 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 10..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:42:58 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 10..763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:42:58 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17565164..17565324 213..373 100 -> Plus
2R 17564900..17565103 10..212 98 -> Plus
2R 17565388..17565777 374..763 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:42:08 Download gff for BO14355.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13452669..13452829 213..373 100 -> Plus
arm_2R 13452405..13452608 10..212 98 -> Plus
arm_2R 13452893..13453282 374..763 99   Plus

BO14355.complete Sequence

781 bp assembled on 2006-10-11

GenBank Submission: FJ633098

> BO14355.complete
GAAGTTATCAGTCGACATGAGTTCGGGCTTTGTGACTGAAGCTGAGGCGA
CCGAGCAAAGGCAGAGACGTCAGGAGGAATGGGAGCGTGTACGCCAGCCG
GAGGATCCACTAGAACGACCTGAGGAACCCTACGATGGGCGCTCACTTTA
TGAACGCCTCAAACAAAATAAGGACAAGAAGGACATGGAGTTCGAGGAAG
CCCACAAGCTGAAAAACCTCATCCGTGGTCTGGACGATGATGAGGTGCAG
TTTCTGGAATTGGTCGATGCCCATAAAATACACGCGGAGCGCCAGCAAAT
GCGCGACGAGGAGCTAGAACTAAAGGATTTTCGCAATCGTGTGGAAAAGC
TGCAGGAGGAGAGTGTAGACAAGAAACTGCAAGCTGAACTAAAAACCACA
GCGAAGTCCGCGGGAGCTTCGGTCGGGCGTAGCACTCAGAAGACGCTGCT
CGGCCAGGGCATCAAGAGAAAAAACGGCGAACTGCCCACCACCAGTAAAG
TAGCCAAAATCACTGAGAATGAGGTCGAACAGACAGCGACAAATGAAGCA
ACCAAGGACCCTGCTGATAAGACAACGAACACCACATTAATTACAAACAA
ATACAACCAGGGGGCCCTAAAGTGCATCGCTATACTTCCGGGCATCGGCT
CCTACACGGAGTCTAGTGACTCGGAGGCCAGCACCGATGAGGAGGAACCC
AGTATGTGCAGCCGAACCGACTTATGTGGCCGCAAAATTCCCAAGAAGAA
GCAGTGCTCAGAGGCAAGCTTTCTAGACCAT

BO14355.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-RB 750 CG14480-PB 1..747 17..763 3735 100 Plus
CG14480-RA 750 CG14480-PA 1..747 17..763 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-RB 875 CG14480-RB 53..800 16..763 3740 100 Plus
CG14480-RA 1337 CG14480-RA 515..1262 16..763 3740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17565386..17565777 372..763 1960 100 Plus
2R 25286936 2R 17564907..17565103 16..212 985 100 Plus
2R 25286936 2R 17565164..17565324 213..373 805 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:18:17 has no hits.

BO14355.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:38:42 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 1..750 17..764 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:52 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 10..763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:45:40 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 516..1262 17..765 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:38:42 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 508..1262 10..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:26 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
CG14480-RA 516..1262 17..765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:26 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17564908..17565103 17..212 100 -> Plus
2R 17565164..17565324 213..373 100 -> Plus
2R 17565388..17565777 374..765 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:45:40 Download gff for BO14355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13452413..13452608 17..212 100 -> Plus
arm_2R 13452669..13452829 213..373 100 -> Plus
arm_2R 13452893..13453282 374..765 99   Plus

BO14355.pep Sequence

Translation from 16 to 781

> BO14355.pep
MSSGFVTEAEATEQRQRRQEEWERVRQPEDPLERPEEPYDGRSLYERLKQ
NKDKKDMEFEEAHKLKNLIRGLDDDEVQFLELVDAHKIHAERQQMRDEEL
ELKDFRNRVEKLQEESVDKKLQAELKTTAKSAGASVGRSTQKTLLGQGIK
RKNGELPTTSKVAKITENEVEQTATNEATKDPADKTTNTTLITNKYNQGA
LKCIAILPGIGSYTESSDSEASTDEEEPSMCSRTDLCGRKIPKKKQCSEA
SFLDH

BO14355.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14480-PB 249 CG14480-PB 1..249 1..249 1273 100 Plus
CG14480-PA 249 CG14480-PA 1..249 1..249 1273 100 Plus