Clone Sequence Records
BO14356.3prime Sequence
775 bp (664 high quality bases) assembled on 2006-05-29
> BO14356.3prime
ATGGTCTAGAAAGCTTGCTAAGATCGGAGGCAGTAAAATGTTAGCGATAT
GATCGTACCCATTTTTCGTGCACTTGTAGCTGGCCATGCGATTGCCAAAG
TCCACGGCAACTGAAACGGATCTTTCCCGGATATAGAGGGCGTAGATGAA
AGCGCCCACGAAGGTGTCTCCTGCTCCCAAGGCGTCCACGATGCGTTTGG
GCTTGTGCGGCTTGACGTGGGTGAAGTTACCATTGAGATCCAAGATGCCG
GCACCCTGATCGCCCCAAAGGACGACCACATATGGTCGCTTGAGATTAAG
GCCCCAACGCATTCGCAATCGCTCGTCCAGCTGCATGCAGGCATCCTCCA
GAGAAACCCAACCATTCGGTTGGGCCAACTTCTTAGAGAATACGGCATAG
TCACAGTAATCCATCAGAGGCCACATGTCATCCAGGTTGTTATCGAACTC
CATCGATAGTACGATCTTCTCCTTTCTGTTCGCATTATATGCCTCTATGT
CCTTGACCATCGGCAATGACTTATCAAAGTATAGTGCCCGAATGTGAATC
CATCCATATTGGTTAAGGTTCAGCTTTCGGAAATCATCAATGCTAACGTA
CGGGAAGTTATTATTGCAATAGACAATGTTCCGCGTCTTAGTCGCCTTGG
TGAGTATCACGGATGAGAAAGGTGCACCCTGGTCACAGGTTGGACAGTTG
TCGATAATGATGCCACGACTCTTCAAGTCATCGACCAGAACTTGAAACAC
ACTCCAACTGCTCAGCATTCCTAAG
BO14356.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 969 | CG7551-RB | 212..966 | 773..19 | 3750 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 282..1036 | 773..19 | 3760 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458771..11459525 | 773..19 | 3760 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:28:11 has no hits.
BO14356.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:32 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 210..969 | 15..775 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:23 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 210..969 | 15..775 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:54:04 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 280..1041 | 11..775 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:15:19 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 280..1041 | 11..775 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:15:19 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458769..11459530 | 11..775 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:54:04 Download gff for
BO14356.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451869..11452630 | 11..775 | 99 | | Minus |
BO14356.5prime Sequence
813 bp (756 high quality bases) assembled on 2006-05-29
> BO14356.5prime
GAAGTTATCAGTCGACATGACTCAATATGGCCACAAACTGAGCTGGGCTG
TTGGCAAAAAGACGGTGTTGTGCATCGGCACAACGACCATTGACTTTGTC
TCGACCATAAAACGTTTTCCCGAGGAGAACTCACATCAGAAGGTCATTGG
AGGATACTGGATTCGCGGTGGCAAGGCCTCGAACAACTGTACTGTTTTGG
CCAATCTGGGCGTCAAAGTGGAGTTCCTAGGAATGCTGAGCAGTTGGAGT
GTGTTTCAAGTTCTGGTCGATGACTTGAAGAGTCGTGGCATCATTATCGA
CAACTGTCCAACCTGTGACCAGGGTGCACCCTTCTCATCCGTGATACTCA
CCAAGGCGACTAAGACGCGGAACATTGTCTATTGCAATAATAACTTCCCG
TACGTTAGCATTGATGATTTCCGAAAGCTGAACCTTAACCAATATGGATG
GATTCACATTCGGGCACTATACTTTGATAAGTCATTGCCGATGGTCAAGG
ACATAGAGGCATATAATGCGAACAGAAAGGAGAAGATCGTACTATCGATG
GAGTTCGATAACAACCTGGATGACATGTGGCCTCTGATGGATTACTGTGA
CTATGCCGTATTCTCTAAGAAGTTGGCCCAACCGAATGGTTGGGTTTCTC
TGGAGGATGCCTGCATGCAGCTGGACGAGCGATTGCGAATGCGTTGGGGC
CTTAATCTCAAGCGACCATATGTGGTCGTCCTTTGGGGCGATCAGGGTGC
CGGCATCTTGGATCTCATTGGTAACTTCACCCACGTCAAGCCGCACAAGC
CCAAACGCATCGT
BO14356.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 969 | CG7551-RB | 1..797 | 17..813 | 3960 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 71..867 | 17..813 | 3970 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:39:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458560..11459356 | 17..813 | 3970 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:39:36 has no hits.
BO14356.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:34 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 1..797 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:24 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 1..797 | 17..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:35:50 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..867 | 7..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:04:24 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..867 | 7..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:04:24 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458551..11459356 | 7..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:35:50 Download gff for
BO14356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451651..11452456 | 7..813 | 99 | | Plus |
BO14356.complete Sequence
1000 bp assembled on 2006-10-11
GenBank Submission: FJ633099
> BO14356.complete
GAAGTTATCAGTCGACATGACTCAATATGGCCACAAACTGAGCTGGGCTG
TTGGCAAAAAGACGGTGTTGTGCATCGGCACAACGACCATTGACTTTGTC
TCGACCATAAAACGTTTTCCCGAGGAGAACTCACATCAGAAGGTCATTGG
AGGATACTGGATTCGCGGTGGCAAGGCCTCGAACAACTGTACTGTTTTGG
CCAATCTGGGCGTCAAAGTGGAGTTCCTAGGAATGCTGAGCAGTTGGAGT
GTGTTTCAAGTTCTGGTCGATGACTTGAAGAGTCGTGGCATCATTATCGA
CAACTGTCCAACCTGTGACCAGGGTGCACCCTTCTCATCCGTGATACTCA
CCAAGGCGACTAAGACGCGGAACATTGTCTATTGCAATAATAACTTCCCG
TACGTTAGCATTGATGATTTCCGAAAGCTGAACCTTAACCAATATGGATG
GATTCACATTCGGGCACTATACTTTGATAAGTCATTGCCGATGGTCAAGG
ACATAGAGGCATATAATGCGAACAGAAAGGAGAAGATCGTACTATCGATG
GAGTTCGATAACAACCTGGATGACATGTGGCCTCTGATGGATTACTGTGA
CTATGCCGTATTCTCTAAGAAGTTGGCCCAACCGAATGGTTGGGTTTCTC
TGGAGGATGCCTGCATGCAGCTGGACGAGCGATTGCGAATGCGTTGGGGC
CTTAATCTCAAGCGACCATATGTGGTCGTCCTTTGGGGCGATCAGGGTGC
CGGCATCTTGGATCTCAATGGTAACTTCACCCACGTCAAGCCGCACAAGC
CCAAACGCATCGTGGACGCCTTGGGAGCAGGAGACACCTTCGTGGGCGCT
TTCATCTACGCCCTCTATATCCGGGAAAGATCCGTTTCAGTTGCCGTGGA
CTTTGGCAATCGCATGGCCAGCTACAAGTGCACGAAAAATGGGTACGATC
ATATCGCTAACATTTTACTGCCTCCGATCTTAGCAAGCTTTCTAGACCAT
BO14356.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 969 | CG7551-PB | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 71..1036 | 17..982 | 4830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:01:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458560..11459525 | 17..982 | 4830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:01:51 has no hits.
BO14356.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:38:45 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 1..969 | 17..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:55 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..1041 | 7..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:06 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1036 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:38:46 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..1041 | 7..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:37:05 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1036 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:37:05 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458560..11459525 | 17..984 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:06 Download gff for
BO14356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451660..11452625 | 17..984 | 99 | | Plus |
BO14356.pep Sequence
Translation from 16 to 1000
> BO14356.pep
MTQYGHKLSWAVGKKTVLCIGTTTIDFVSTIKRFPEENSHQKVIGGYWIR
GGKASNNCTVLANLGVKVEFLGMLSSWSVFQVLVDDLKSRGIIIDNCPTC
DQGAPFSSVILTKATKTRNIVYCNNNFPYVSIDDFRKLNLNQYGWIHIRA
LYFDKSLPMVKDIEAYNANRKEKIVLSMEFDNNLDDMWPLMDYCDYAVFS
KKLAQPNGWVSLEDACMQLDERLRMRWGLNLKRPYVVVLWGDQGAGILDL
NGNFTHVKPHKPKRIVDALGAGDTFVGAFIYALYIRERSVSVAVDFGNRM
ASYKCTKNGYDHIANILLPPILASFLDH
BO14356.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 322 | CG7551-PB | 1..322 | 1..322 | 1726 | 100 | Plus |
| CG7328-PA | 306 | CG7328-PA | 5..304 | 15..318 | 660 | 42.1 | Plus |
| CG12289-PA | 378 | CG12289-PA | 11..314 | 15..316 | 572 | 36.2 | Plus |
| CG7335-PA | 372 | CG7335-PA | 30..357 | 14..311 | 290 | 26.8 | Plus |
