Clone BO14358 Report

Search the DGRC for BO14358

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG12493-RA
Protein status:BO14358.pep: validated full length
Sequenced Size:922

Clone Sequence Records

BO14358.3prime Sequence

760 bp (712 high quality bases) assembled on 2006-05-29

> BO14358.3prime
ATGGTCTAGAAAGCTTGCTGCTTGTGGATAGTCGGTTCCAAAGAGTTTGT
TACAAACTAATGCGGCTACTTTGCGGCGTGCATCTTTTTTGGTTGGCCCA
TCAGCCTTAAACTCGCAGTTGTCCACGGAGACGCCCATTGAGAAAACTTT
ACGGTTTTCACCAGAGCTACCTAAAAATTTGAAGGTGGTCTGGGGGCGCA
TTTGCATCAGAACCATGCAAGGGTGCATATTCTTCCATAATTTGGGCAAC
TGTCCAACTGACGACGACGTCTTCTTGTTCTTTACGTCATTATACAGGGC
TGCAACATCAATAGCGTCGCTGTTCCATTTCTCAGCAAGTTTGTAAACGG
CATAAGAGGTCATCTTTTCGAGTATATTATCTTCATCGCCTCCCGAGCTG
TTTTCTGGCTCGGCCAACAGAGCTTTCATTTTGGTGGTTAGGATTTCTCG
CAGAGCCTTCTCGCAAGCTGCATTCCCTGCAGAGTTTTCTGAAGAACCCT
CCGCATCGTATTTCTTTGAGTTAACAACAATGTTAGCCACATTCTTCCCC
TCGTGGTCTTGTTTTATTTGCATGTTGTCGATTATCACGCCCTTTAACTC
TTTCAAAACCATAAGGGCATCCTTGGAGGTCACGGCCTTGGGCAACGGGC
GAACAAGACGATCCTTGGCTTTTTGGGAACGTTTCAATTTCTTTACCTTC
TTCTTTTTCTTCTTAAGGTCGCTGGTTGCCATGGCAGCGTCATCAGGGAT
CTTTGACATA

BO14358.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-PA 891 CG12493-RA 147..888 760..19 3685 99.8 Minus
CG10630-PA 975 CG10630-RA 452..568 530..414 385 93.1 Minus
CG10630-PA 975 CG10630-RA 329..434 653..548 330 92.4 Minus
CG10630-PA 975 CG10630-RA 931..969 60..22 170 97.4 Minus
CG10630-PA 975 CG10630-RA 593..659 389..323 160 89.5 Minus
CG10630-PA 975 CG10630-RA 750..779 238..209 150 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-RB 1164 CG12493-RB 263..1004 760..19 3695 99.9 Minus
CG12493-RA 1173 CG12493-RA 272..1013 760..19 3695 99.9 Minus
blanks-RA 1268 CG10630-RA 439..1079 653..22 1660 84.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4752553..4753294 19..760 3695 99.9 Plus
3L 28110227 3L 5497712..5498352 22..653 1555 83.9 Plus
Blast to na_te.dros performed on 2015-02-11 09:55:13 has no hits.

BO14358.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:37 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-PA 148..891 15..759 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:28 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-PA 148..891 15..759 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:55:25 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 273..1018 13..759 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:04:57 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 273..1018 13..759 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:04:57 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4752548..4753293 13..759 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:55:25 Download gff for BO14358.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4752548..4753293 13..759 99   Plus

BO14358.5prime Sequence

847 bp (807 high quality bases) assembled on 2006-05-29

> BO14358.5prime
GAAGTTATCAGTCGACATGGCAATCGATGATATGAAGGACCTATTGATCG
TAAATGTTTCTGACCAAGAGGATGCAGGTATGTCAGATGACTTGAAGGAA
ACTGCAATGGATTGTAATATGCCCGATGGTGAATCTTCTCTCGTAATCAC
TGATGGCGATTCTATGTCAAAGATCCCTGATGACGCTGCCATGGCAACCA
GCGACCCTAAGAAGAAAAAGAAGAAGGTAAAGAAATTGAAACGTTCCCAA
AAAGCCAAGGATCGTCTTGTTCGCCCGTTGCCCAAGGCCGTGACCTCCAA
GGATGCCCTTATGGTTTTGAAAGAGTTAAAGGGCGTGATAATCGACAACA
TGCAAATAAAACAAGACCACGAGGGGAAGAATGTGGCTAACATTGTTGTT
AACTCAAAGAAATACGATGCGGAGGGTTCTTCAGAAAACTCTGCAGGGAA
TGCAGCTTGCGAGAAGGCTCTGCGAGAAATCCTAACCACCAAAATGAAAG
CTCTGTTGGCCGAGCCAGAAAACAGCTCGGGAGGCGATGAAGATAATATA
CTCGAAAAGATGACCTCTTATGCCGTTTACAAACTTGCTGAGAAATGGAA
CAGCGACGCTATTGATGTTGCAGCCCTGTATAATGACGTAAAGAACAAGA
AGACGTCGTCGTCAGTTGGACAGTTGCCCAAATTATGGAAGAATATGCAC
CCTTGCATGGTTCTGATGCAAATGCGCCCCCAGACCACCTTCAAATTTTT
AGGTAGCTCTGGTGAAAACCGTAAAGTTTTCTCAATGGGCGTCTCCGTGG
ACAACTGCGAGTTTAAGGCTGATGGGCCAACCCAAAAAGATGCACGC

BO14358.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-PA 891 CG12493-RA 1..831 17..847 4130 99.8 Plus
CG10630-PA 975 CG10630-RA 452..568 393..509 385 93.1 Plus
CG10630-PA 975 CG10630-RA 329..434 270..375 330 92.4 Plus
CG10630-PA 975 CG10630-RA 593..659 534..600 160 89.5 Plus
CG10630-PA 975 CG10630-RA 750..779 685..714 150 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-RA 1173 CG12493-RA 126..956 17..847 4140 99.9 Plus
CG12493-RB 1164 CG12493-RB 126..947 17..847 3995 98.8 Plus
blanks-RA 1268 CG10630-RA 439..1007 270..829 1495 84.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4752610..4753372 847..85 3800 99.9 Minus
3L 28110227 3L 5497784..5498352 829..270 1390 84.2 Minus
3L 28110227 3L 4753544..4753613 86..17 350 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:10:35 has no hits.

BO14358.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:38 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-PA 1..831 17..847 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:30 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-PA 1..831 17..847 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:43:17 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 116..956 7..847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:20:32 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 116..956 7..847 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:20:32 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4752610..4753370 87..847 99 <- Minus
3L 4753544..4753623 7..86 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:43:17 Download gff for BO14358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4752610..4753370 87..847 99 <- Minus
arm_3L 4753544..4753623 7..86 95   Minus

BO14358.complete Sequence

922 bp assembled on 2006-10-11

GenBank Submission: FJ633100

> BO14358.complete
GAAGTTATCAGTCGACATGGCAATCGATGATATGAAGGACCTATTGATCG
TAAATGTTTCTGACCAAGAGGATGCAGGTATGTCAGATGACTTGAAGGAA
ACTGCAATGGATTGTAATATGCCCGATGGTGAATCTTCTCTCGTAATCAC
TGATGGCGATTCTATGTCAAAGATCCCTGATGACGCTGCCATGGCAACCA
GCGACCCTAAGAAGAAAAAGAAGAAGGTAAAGAAATTGAAACGTTCCCAA
AAAGCCAAGGATCGTCTTGTTCGCCCGTTGCCCAAGGCCGTGACCTCCAA
GGATGCCCTTATGGTTTTGAAAGAGTTAAAGGGCGTGATAATCGACAACA
TGCAAATAAAACAAGACCACGAGGGGAAGAATGTGGCTAACATTGTTGTT
AACTCAAAGAAATACGATGCGGAGGGTTCTTCAGAAAACTCTGCAGGGAA
TGCAGCTTGCGAGAAGGCTCTGCGAGAAATCCTAACCACCAAAATGAAAG
CTCTGTTGGCCGAGCCAGAAAACAGCTCGGGAGGCGATGAAGATAATATA
CTCGAAAAGATGACCTCTTATGCCGTTTACAAACTTGCTGAGAAATGGAA
CAGCGACGCTATTGATGTTGCAGCCCTGTATAATGACGTAAAGAACAAGA
AGACGTCGTCGTCAGTTGGACAGTTGCCCAAATTATGGAAGAATATGCAC
CCTTGCATGGTTCTGATGCAAATGCGCCCCCAGACCACCTTCAAATTTTT
AGGTAGCTCTGGTGAAAACCGTAAAGTTTTCTCAATGGGCGTCTCCGTGG
ACAACTGCGAGTTTAAGGCTGATGGGCCAACCAAAAAAGATGCACGCCGC
AAAGTAGCCGCATTAGTTTGTAACAAACTCTTTGGAACCGACTATCCACA
AGCAGCAAGCTTTCTAGACCAT

BO14358.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-RA 891 CG12493-PA 1..888 17..904 4440 100 Plus
CG12493-RB 882 CG12493-PB 1..879 17..904 4270 99 Plus
blanks-RA 975 CG10630-PA 329..969 270..901 1555 83.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-RA 1173 CG12493-RA 126..1013 17..904 4440 100 Plus
CG12493-RB 1164 CG12493-RB 126..1004 17..904 4270 99 Plus
blanks-RA 1268 CG10630-RA 439..1079 270..901 1555 83.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4752553..4753372 904..85 4100 100 Minus
3L 28110227 3L 5497712..5498352 901..270 1555 83.9 Minus
3L 28110227 3L 4753544..4753613 86..17 350 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:59:35 has no hits.

BO14358.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:39:01 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 17..908 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:59 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 96..998 7..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:43 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 126..1013 17..906 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:39:02 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 96..998 7..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:31:53 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 126..1013 17..906 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:31:53 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4752551..4753370 87..906 99 <- Minus
3L 4753544..4753613 17..86 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:43 Download gff for BO14358.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4752551..4753370 87..906 99 <- Minus
arm_3L 4753544..4753613 17..86 100   Minus

BO14358.pep Sequence

Translation from 16 to 922

> BO14358.pep
MAIDDMKDLLIVNVSDQEDAGMSDDLKETAMDCNMPDGESSLVITDGDSM
SKIPDDAAMATSDPKKKKKKVKKLKRSQKAKDRLVRPLPKAVTSKDALMV
LKELKGVIIDNMQIKQDHEGKNVANIVVNSKKYDAEGSSENSAGNAACEK
ALREILTTKMKALLAEPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAID
VAALYNDVKNKKTSSSVGQLPKLWKNMHPCMVLMQMRPQTTFKFLGSSGE
NRKVFSMGVSVDNCEFKADGPTKKDARRKVAALVCNKLFGTDYPQAASFL
DH

BO14358.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-PA 296 CG12493-PA 1..296 1..296 1509 100 Plus
CG12493-PB 293 CG12493-PB 1..293 1..296 1480 99 Plus
blanks-PA 324 CG10630-PA 18..323 5..295 795 56.4 Plus
DIP1-PI 378 CG17686-PI 49..372 11..293 362 32.1 Plus
DIP1-PG 378 CG17686-PG 49..372 11..293 362 32.1 Plus