Clone Sequence Records
BO14364.5prime Sequence
796 bp (689 high quality bases) assembled on 2006-05-29
> BO14364.5prime
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCAC
GAAGGCCATGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCAAGG
ATGTGGTGGTGTTTCATGACACTTCCGGTCGCTTGGACCAGGTCATGGCC
AACCTAAACACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCT
GTTGAGCGGGGAATCGGTGAACGTGGTTATTGCGGCCGGGAAAGCA
BO14364.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-PA | 1038 | CG14721-RA | 1..754 | 17..770 | 3695 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-RA | 1248 | CG14721-RA | 48..826 | 17..796 | 3830 | 99.5 | Plus |
CG14721-RB | 1142 | CG14721-RB | 1..657 | 139..796 | 3220 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:59:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11735918..11736333 | 380..796 | 1990 | 99 | Plus |
3R | 32079331 | 3R | 11735494..11735857 | 17..380 | 1820 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:59:41 has no hits.
BO14364.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:48 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-PA | 1..778 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:43 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-PA | 1..778 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:52:54 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..825 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:51 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..825 | 17..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:51 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11735494..11735857 | 17..380 | 100 | -> | Plus |
3R | 11735919..11736332 | 381..795 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:52:54 Download gff for
BO14364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7561216..7561579 | 17..380 | 100 | -> | Plus |
arm_3R | 7561641..7562054 | 381..795 | 99 | | Plus |
BO14364.complete Sequence
1069 bp assembled on 2008-11-10
GenBank Submission: KX798229
> BO14364.complete
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCAC
GAAGGCCATGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCCAGG
ATGTGGTGGTGTTTCATGACACTTCCGGTCGCTTGGACCAGGTCATGGCC
AACCTAAACACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCT
GTTGAGCGGGGATTCGGTGACGTGGTTATTGCGGCCGGGAAAGCACACGA
TACAGGTGCCCGTCGACCTGGTCACCAGCCAGCGATGGTGCTCTCTGATG
CCCGTGGGATCGTCGGCCCACAATGTCACTACCACGGGACTCAAATGGAA
CCTATATCATGCACAGCTGGAGTTTGGTGGTATGGTAAGCACCTCAAACA
CCTATGCGACCGAGTTCGTCCAGGTGGAGACGGACGCCAACCTGATCTGG
TCTATGGGTGCCTACGAATTTGAGGATAAGGTGCGACAAGCCGCCAAGAC
AGCAAGCTTTCTAGACCAT
BO14364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-RA | 1038 | CG14721-PA | 1..1035 | 17..1051 | 5160 | 99.9 | Plus |
CG14721-RB | 828 | CG14721-PB | 1..825 | 227..1051 | 4110 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:48:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-RA | 1248 | CG14721-RA | 48..1082 | 17..1051 | 5160 | 99.9 | Plus |
CG14721-RB | 1142 | CG14721-RB | 1..913 | 139..1051 | 4550 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:48:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11735918..11736443 | 380..905 | 2615 | 99.8 | Plus |
3R | 32079331 | 3R | 11735494..11735857 | 17..380 | 1820 | 100 | Plus |
3R | 32079331 | 3R | 11736499..11736648 | 902..1051 | 735 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:48:08 has no hits.
BO14364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:13 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1082 | 17..1051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:25:14 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1082 | 17..1053 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:27:28 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1082 | 17..1053 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:17 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1082 | 17..1053 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:17 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11735494..11735857 | 17..380 | 100 | -> | Plus |
3R | 11735919..11736443 | 381..905 | 99 | -> | Plus |
3R | 11736503..11736648 | 906..1053 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:25:14 Download gff for
BO14364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7561216..7561579 | 17..380 | 100 | -> | Plus |
arm_3R | 7561641..7562165 | 381..905 | 99 | -> | Plus |
arm_3R | 7562225..7562370 | 906..1053 | 98 | | Plus |
BO14364.pep Sequence
Translation from 16 to 1069
> BO14364.pep
MILVKLYGTGGCTMTAAGAPGSALNWMRRSRHGFGLIRITRVGRPAHQRT
THSATHRFLCTKTTIGFRQQMDHTIPPKEYKWTPGNLINENFKLGDHGHV
CVVLNRQIQVPAHVVKLLWKNAAVRCAVDGGSNHWRDFVVAQAMSKKANG
SAPTTPLEPLDVITGDFDSITEETVDFFKTTPKVHTPDQDATDFTKAMAV
LQPVMTQRKIQDVVVFHDTSGRLDQVMANLNTLYKSQKDNCNVFLLSGDS
VTWLLRPGKHTIQVPVDLVTSQRWCSLMPVGSSAHNVTTTGLKWNLYHAQ
LEFGGMVSTSNTYATEFVQVETDANLIWSMGAYEFEDKVRQAAKTASFLD
H
BO14364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-PA | 345 | CG14721-PA | 1..345 | 1..345 | 1841 | 100 | Plus |
CG14721-PB | 275 | CG14721-PB | 1..275 | 71..345 | 1466 | 100 | Plus |