Clone BO14364 Report

Search the DGRC for BO14364

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:143
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG14721-RA
Protein status:BO14364.pep: Imported from assembly
Sequenced Size:1069

Clone Sequence Records

BO14364.5prime Sequence

796 bp (689 high quality bases) assembled on 2006-05-29

> BO14364.5prime
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCAC
GAAGGCCATGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCAAGG
ATGTGGTGGTGTTTCATGACACTTCCGGTCGCTTGGACCAGGTCATGGCC
AACCTAAACACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCT
GTTGAGCGGGGAATCGGTGAACGTGGTTATTGCGGCCGGGAAAGCA

BO14364.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 1038 CG14721-RA 1..754 17..770 3695 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1248 CG14721-RA 48..826 17..796 3830 99.5 Plus
CG14721-RB 1142 CG14721-RB 1..657 139..796 3220 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735918..11736333 380..796 1990 99 Plus
3R 32079331 3R 11735494..11735857 17..380 1820 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:59:41 has no hits.

BO14364.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:25:48 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-PA 1..778 17..795 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:43 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-PA 1..778 17..795 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:52:54 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..825 17..795 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:51 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..825 17..795 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:51 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11735494..11735857 17..380 100 -> Plus
3R 11735919..11736332 381..795 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:52:54 Download gff for BO14364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561216..7561579 17..380 100 -> Plus
arm_3R 7561641..7562054 381..795 99   Plus

BO14364.complete Sequence

1069 bp assembled on 2008-11-10

GenBank Submission: KX798229

> BO14364.complete
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCAC
GAAGGCCATGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCCAGG
ATGTGGTGGTGTTTCATGACACTTCCGGTCGCTTGGACCAGGTCATGGCC
AACCTAAACACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCT
GTTGAGCGGGGATTCGGTGACGTGGTTATTGCGGCCGGGAAAGCACACGA
TACAGGTGCCCGTCGACCTGGTCACCAGCCAGCGATGGTGCTCTCTGATG
CCCGTGGGATCGTCGGCCCACAATGTCACTACCACGGGACTCAAATGGAA
CCTATATCATGCACAGCTGGAGTTTGGTGGTATGGTAAGCACCTCAAACA
CCTATGCGACCGAGTTCGTCCAGGTGGAGACGGACGCCAACCTGATCTGG
TCTATGGGTGCCTACGAATTTGAGGATAAGGTGCGACAAGCCGCCAAGAC
AGCAAGCTTTCTAGACCAT

BO14364.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1038 CG14721-PA 1..1035 17..1051 5160 99.9 Plus
CG14721-RB 828 CG14721-PB 1..825 227..1051 4110 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1248 CG14721-RA 48..1082 17..1051 5160 99.9 Plus
CG14721-RB 1142 CG14721-RB 1..913 139..1051 4550 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735918..11736443 380..905 2615 99.8 Plus
3R 32079331 3R 11735494..11735857 17..380 1820 100 Plus
3R 32079331 3R 11736499..11736648 902..1051 735 99.3 Plus
Blast to na_te.dros performed on 2014-11-27 13:48:08 has no hits.

BO14364.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:13 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1082 17..1051 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:25:14 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1082 17..1053 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:27:28 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1082 17..1053 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:17 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1082 17..1053 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:17 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11735494..11735857 17..380 100 -> Plus
3R 11735919..11736443 381..905 99 -> Plus
3R 11736503..11736648 906..1053 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:25:14 Download gff for BO14364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561216..7561579 17..380 100 -> Plus
arm_3R 7561641..7562165 381..905 99 -> Plus
arm_3R 7562225..7562370 906..1053 98   Plus

BO14364.pep Sequence

Translation from 16 to 1069

> BO14364.pep
MILVKLYGTGGCTMTAAGAPGSALNWMRRSRHGFGLIRITRVGRPAHQRT
THSATHRFLCTKTTIGFRQQMDHTIPPKEYKWTPGNLINENFKLGDHGHV
CVVLNRQIQVPAHVVKLLWKNAAVRCAVDGGSNHWRDFVVAQAMSKKANG
SAPTTPLEPLDVITGDFDSITEETVDFFKTTPKVHTPDQDATDFTKAMAV
LQPVMTQRKIQDVVVFHDTSGRLDQVMANLNTLYKSQKDNCNVFLLSGDS
VTWLLRPGKHTIQVPVDLVTSQRWCSLMPVGSSAHNVTTTGLKWNLYHAQ
LEFGGMVSTSNTYATEFVQVETDANLIWSMGAYEFEDKVRQAAKTASFLD
H

BO14364.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 345 CG14721-PA 1..345 1..345 1841 100 Plus
CG14721-PB 275 CG14721-PB 1..275 71..345 1466 100 Plus