Clone Sequence Records
BO14389.5prime Sequence
488 bp (487 high quality bases) assembled on 2006-05-29
> BO14389.5prime
GAAGTTATCAGTCGACATGAGCAACTCATCGGCCTTTTACGTGCATTTGG
AGGATCCTGTGCGGAGTGATCCCCCCAGTGGACTGCATCGCAAGTATCGC
CCATTTCCGACCCGCCCCCATGAGGAGCGTCTGGAGGAGGCGGAGGAGCG
ACGCAATCGGCTGGGTGAGCACAAGGTGGAGCAGCTGTCCGTTCGTCTGG
CGCGAGTGGCGCTGATCACGGATCGTCACCATCGCCAGACCACCCAAAGT
TGGCTAGACTCCCAAGATCGCATTACTCGCGACATGGACGAACATGTGCG
CAAGCGGACGGCCCAGATCTCGAAACGTCTGAGAAACCTCAGCGATCACA
ACCACAAGGTTCAGGTGCGCAAGGACGAGGCCAAGCAGGAGAAGCTTCTC
CGAAAACTGACTCATCTCTACGAGGCGCAGAACGCCAGCACTATTTCGCG
ATTTTGGGGCAAAATTCACAAGGCAAGCTTTCTAGACC
BO14389.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-PA | 459 | CG11298-RA | 1..456 | 17..472 | 2255 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:44:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-RA | 569 | CG11298-RA | 65..520 | 17..472 | 2265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22348371..22348826 | 17..472 | 2265 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:44:48 has no hits.
BO14389.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:31 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-PA | 1..459 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:44 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-PA | 1..459 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:43 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 17..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:16:22 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 17..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:16:22 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22348371..22348832 | 17..479 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:43 Download gff for
BO14389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18235876..18236337 | 17..479 | 99 | | Plus |
BO14389.3prime Sequence
488 bp (487 high quality bases) assembled on 2006-05-29
> BO14389.3prime
ATGGTCTAGAAAGCTTGCCTTGTGAATTTTGCCCCAAAATCGCGAAATAG
TGCTGGCGTTCTGCGCCTCGTAGAGATGAGTCAGTTTTCGGAGAAGCTTC
TCCTGCTTGGCCTCGTCCTTGCGCACCTGAACCTTGTGGTTGTGATCGCT
GAGGTTTCTCAGACGTTTCGAGATCTGGGCCGTCCGCTTGCGCACATGTT
CGTCCATGTCGCGAGTAATGCGATCTTGGGAGTCTAGCCAACTTTGGGTG
GTCTGGCGATGGTGACGATCCGTGATCAGCGCCACTCGCGCCAGACGAAC
GGACAGCTGCTCCACCTTGTGCTCACCCAGCCGATTGCGTCGCTCCTCCG
CCTCCTCCAGACGCTCCTCATGGGGGCGGGTCGGAAATGGGCGATACTTG
CGATGCAGTCCACTGGGGGGATCACTCCGCACAGGATCCTCCAAATGCAC
GTAAAAGGCCGATGAGTTGCTCATGTCGACTGATAACT
BO14389.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:20:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-PA | 459 | CG11298-RA | 1..456 | 474..19 | 2255 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 21:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-RA | 569 | CG11298-RA | 65..520 | 474..19 | 2265 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 21:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22348371..22348826 | 474..19 | 2265 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 21:36:29 has no hits.
BO14389.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:30 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-PA | 1..459 | 18..474 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:42 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-PA | 1..459 | 18..474 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 20:26:47 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 12..474 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:31:05 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 12..474 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:31:05 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22348371..22348832 | 12..474 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 20:26:47 Download gff for
BO14389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18235876..18236337 | 12..474 | 99 | | Minus |
BO14389.complete Sequence
490 bp assembled on 2006-10-11
GenBank Submission: FJ633108
> BO14389.complete
GAAGTTATCAGTCGACATGAGCAACTCATCGGCCTTTTACGTGCATTTGG
AGGATCCTGTGCGGAGTGATCCCCCCAGTGGACTGCATCGCAAGTATCGC
CCATTTCCGACCCGCCCCCATGAGGAGCGTCTGGAGGAGGCGGAGGAGCG
ACGCAATCGGCTGGGTGAGCACAAGGTGGAGCAGCTGTCCGTTCGTCTGG
CGCGAGTGGCGCTGATCACGGATCGTCACCATCGCCAGACCACCCAAAGT
TGGCTAGACTCCCAAGATCGCATTACTCGCGACATGGACGAACATGTGCG
CAAGCGGACGGCCCAGATCTCGAAACGTCTGAGAAACCTCAGCGATCACA
ACCACAAGGTTCAGGTGCGCAAGGACGAGGCCAAGCAGGAGAAGCTTCTC
CGAAAACTGACTCATCTCTACGAGGCGCAGAACGCCAGCACTATTTCGCG
ATTTTGGGGCAAAATTCACAAGGCAAGCTTTCTAGACCAT
BO14389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-RA | 459 | CG11298-PA | 1..456 | 17..472 | 2265 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-RA | 569 | CG11298-RA | 65..520 | 17..472 | 2265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22348371..22348826 | 17..472 | 2265 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:38:28 has no hits.
BO14389.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:38:18 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 1..459 | 17..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:52:44 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 17..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:28 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..520 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:38:18 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..526 | 17..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:49:41 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11298-RA | 65..520 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:49:41 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22348371..22348826 | 17..474 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:28 Download gff for
BO14389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18235876..18236331 | 17..474 | 99 | | Plus |
BO14389.pep Sequence
Translation from 16 to 490
> BO14389.pep
MSNSSAFYVHLEDPVRSDPPSGLHRKYRPFPTRPHEERLEEAEERRNRLG
EHKVEQLSVRLARVALITDRHHRQTTQSWLDSQDRITRDMDEHVRKRTAQ
ISKRLRNLSDHNHKVQVRKDEAKQEKLLRKLTHLYEAQNASTISRFWGKI
HKASFLDH
BO14389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:55:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11298-PA | 152 | CG11298-PA | 1..152 | 1..152 | 796 | 100 | Plus |
