Clone Sequence Records
BO14395.3prime Sequence
690 bp (684 high quality bases) assembled on 2006-05-29
> BO14395.3prime
ATGGTCTAGAAAGCTTGCTTCCTTTTTCCTTTTGAAAACAATTGAGGTTA
CCACATTGCCCACCTTGCCGCCAAACTTAAAGGTCGGCGTGGGAATGGTA
TAGTACTTGACAAACTTCTCGGCAAAGCTATCCACCAGCTCGTCCTCGGT
CCAATTGCACGACGTGATTACAAACAGGCTGTCAGCAGTTCGCAGCAACT
TCTCCACCGTGTCCAGGTAGAGAGCACGTTTCTCCTTGGCATTATCCGGA
CAAAGACTGACTGCATCGTAGGTTCCCTTGTCGTGCACCACGTCAAATTG
GCCCAGCTCGTTCTGCGGCTGGGTTAAGTCCGCCACCTTGTATGTGATGC
TCAGCTTGTTATCCTCCGCAATGTTTTGCGCCAGCTCGACGGCTTTGGGA
GAGTAGTCCACGCCGGTCAGGTCTCCGGTGAAGCCTTCATTTGCCAGGCC
CACTAGGAACATGCCATTGCCGCAGCCCAGGTCCAGCACTCGACTCGCCT
CCTTGTCGATCTTCTCCTCGTTAAGCAGCCAGTCGATCGTTCGCCATTGG
GCACTTTCGTCAAACCAGATCTCGCCCACGTCGCCGTGGCTCTTGTAGTT
TCGTATCTCCCGGTTGTAGCTGGACTCCCAAAATTCCTTGGTGCCAAGTT
CCGATCCGTTCAGCTCGCTATCCATGTCGACTGATAACTT
BO14395.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-PA | 660 | CG9643-RA | 1..657 | 675..19 | 3260 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 878 | CG9643-RB | 84..740 | 675..19 | 3270 | 99.8 | Minus |
| CG9643-RA | 763 | CG9643-RA | 84..740 | 675..19 | 3270 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 19:11:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2978549..2979205 | 19..675 | 3270 | 99.8 | Plus |
Blast to na_te.dros performed 2015-01-30 19:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3206..3232 | 28..2 | 108 | 88.9 | Minus |
BO14395.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:42 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-PA | 1..660 | 15..675 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:59 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-PA | 1..660 | 15..675 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:06:35 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 15..675 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:18:40 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 15..675 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:18:40 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2978545..2979205 | 15..675 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:06:35 Download gff for
BO14395.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2978545..2979205 | 15..675 | 99 | | Plus |
BO14395.5prime Sequence
689 bp (688 high quality bases) assembled on 2006-05-29
> BO14395.5prime
GAAGTTATCAGTCGACATGGATAGCGAGCTGAACGGATCGGAACTTGGCA
CCAAGGAATTTTGGGAGTCCAGCTACAACCGGGAGATACGAAACTACAAG
AGCCACGGCGACGTGGGCGAGATCTGGTTTGACGAAAGTGCCCAATGGCG
AACGATCGACTGGCTGCTTAACGAGGAGAAGATCGACAAGGAGGCGAGTC
GAGTGCTGGACCTGGGCTGCGGCAATGGCATGTTCCTAGTGGGCCTGGCA
AATGAAGGCTTCACCGGAGACCTGACCGGCGTGGACTACTCTCCCAAAGC
CGTCGAGCTGGCGCAAAACATTGCGGAGGATAACAAGCTGAGCATCACAT
ACAAGGTGGCGGACTTAACCCAGCCGCAGAACGAGCTGGGCCAATTTGAC
GTGGTGCACGACAAGGGAACCTACGATGCAGTCAGTCTTTGTCCGGATAA
TGCCAAGGAGAAACGTGCTCTCTACCTGGACACGGTGGAGAAGTTGCTGC
GAACTGCTGACAGCCTGTTTGTAATCACGTCGTGCAATTGGACCGAGGAC
GAGCTGGTGGATAGCTTTGCCGAGAAGTTTGTCAAGTACTATACCATTCC
CACGCCGACCTTTAAGTTTGGCGGCAAGGTGGGCAATGTGGTAACCTCAA
TTGTTTTCAAAAGGAAAAAGGAAGCAAGCTTTCTAGACC
BO14395.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:21:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-PA | 660 | CG9643-RA | 1..657 | 17..673 | 3260 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:44:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 878 | CG9643-RB | 84..740 | 17..673 | 3270 | 99.8 | Plus |
| CG9643-RA | 763 | CG9643-RA | 84..740 | 17..673 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2978549..2979205 | 673..17 | 3270 | 99.8 | Minus |
Blast to na_te.dros performed 2015-02-12 12:44:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3206..3228 | 664..686 | 106 | 95.7 | Plus |
BO14395.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:26:42 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-PA | 1..660 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:01 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-PA | 1..660 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:11:40 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:15:17 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 17..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:15:17 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2978545..2979205 | 17..677 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:11:40 Download gff for
BO14395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2978545..2979205 | 17..677 | 99 | | Minus |
BO14395.complete Sequence
691 bp assembled on 2006-10-11
GenBank Submission: FJ633109
> BO14395.complete
GAAGTTATCAGTCGACATGGATAGCGAGCTGAACGGATCGGAACTTGGCA
CCAAGGAATTTTGGGAGTCCAGCTACAACCGGGAGATACGAAACTACAAG
AGCCACGGCGACGTGGGCGAGATCTGGTTTGACGAAAGTGCCCAATGGCG
AACGATCGACTGGCTGCTTAACGAGGAGAAGATCGACAAGGAGGCGAGTC
GAGTGCTGGACCTGGGCTGCGGCAATGGCATGTTCCTAGTGGGCCTGGCA
AATGAAGGCTTCACCGGAGACCTGACCGGCGTGGACTACTCTCCCAAAGC
CGTCGAGCTGGCGCAAAACATTGCGGAGGATAACAAGCTGAGCATCACAT
ACAAGGTGGCGGACTTAACCCAGCCGCAGAACGAGCTGGGCCAATTTGAC
GTGGTGCACGACAAGGGAACCTACGATGCAGTCAGTCTTTGTCCGGATAA
TGCCAAGGAGAAACGTGCTCTCTACCTGGACACGGTGGAGAAGTTGCTGC
GAACTGCTGACAGCCTGTTTGTAATCACGTCGTGCAATTGGACCGAGGAC
GAGCTGGTGGATAGCTTTGCCGAGAAGTTTGTCAAGTACTATACCATTCC
CACGCCGACCTTTAAGTTTGGCGGCAAGGTGGGCAATGTGGTAACCTCAA
TTGTTTTCAAAAGGAAAAAGGAAGCAAGCTTTCTAGACCAT
BO14395.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 660 | CG9643-PB | 1..657 | 17..673 | 3270 | 99.8 | Plus |
| CG9643-RA | 660 | CG9643-PA | 1..657 | 17..673 | 3270 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 878 | CG9643-RB | 84..740 | 17..673 | 3270 | 99.8 | Plus |
| CG9643-RA | 763 | CG9643-RA | 84..740 | 17..673 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2978549..2979205 | 673..17 | 3270 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-27 19:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3206..3232 | 664..690 | 108 | 88.9 | Plus |
BO14395.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:30:11 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 1..660 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:48:29 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 206..865 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:17 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..740 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:30:11 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 206..865 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:16 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..740 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:16 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2978547..2979205 | 17..675 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:17 Download gff for
BO14395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2978547..2979205 | 17..675 | 99 | | Minus |
BO14395.pep Sequence
Translation from 16 to 691
> BO14395.pep
MDSELNGSELGTKEFWESSYNREIRNYKSHGDVGEIWFDESAQWRTIDWL
LNEEKIDKEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQ
NIAEDNKLSITYKVADLTQPQNELGQFDVVHDKGTYDAVSLCPDNAKEKR
ALYLDTVEKLLRTADSLFVITSCNWTEDELVDSFAEKFVKYYTIPTPTFK
FGGKVGNVVTSIVFKRKKEASFLDH
BO14395.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-PB | 219 | CG9643-PB | 1..219 | 1..219 | 1154 | 100 | Plus |
| CG9643-PA | 219 | CG9643-PA | 1..219 | 1..219 | 1154 | 100 | Plus |
